Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022234_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:173373975:173374586:1 gene:Zm00001d022234 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

ATGGCCGAGAGGACGAACGCGATGGCGGCGCCGCGGCCGCTCCTGCGCCGGATGCTCTCG
TTCCGGGAGCCGCTCCTGGTCATCCCGTACCTGCTCAGCTTCCTGGGCGCCGCGGCCTCG
GCGCTGGCGCGCAGCCACTCGTCGCTGCTGCACTCGCTCGCCAGGGCGCTGTTCCCGGCC
GCGCCTGCCGCCGCCAACGCCAAGCACGCGCCGCCGCCTGCCGCTGCCGCTGCCGCTGCC
GCCGCGGCGCCCCTGGACGGCGAGGACGCCGCGCTGAGCAAGGCGGAGGTGGAGGCCATC
ATGGCTACGATCGGCCTCGCGGCGGCCGGGAAAGGCGAGGGCCTCGCGGCCGCCATGGGC
CGCGACGAGGTGTCCGCGCTCTTCGACGCCGACGAGCCCAGCTTCGCCGAGGTGCGGGGC
GCCTTCGCCGTCTTCGACGCCGACCGCGACGGCTTCATCGGCGCCGAGGACCTGCAGTGC
GCCCTGGCGCGGCTCGGCGTCAGGCAGGACGCCGCCGCGTGCCGCGCCATGGTCGTCGCG
GCCGGCGGCGGCCGGGACGCCCGGATGAGCCTGTTCCAGTTCGTCAGGTTCCTCGAGAAC
GGCCTGTGCTGA

Peptide Sequence

PEP ID

Zm00001d022234_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:173373975:173374586:1 gene:Zm00001d022234 transcript:Zm00001d022234_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

MAERTNAMAAPRPLLRRMLSFREPLLVIPYLLSFLGAAASALARSHSSLLHSLARALFPA
APAAANAKHAPPPAAAAAAAAAAPLDGEDAALSKAEVEAIMATIGLAAAGKGEGLAAAMG
RDEVSALFDADEPSFAEVRGAFAVFDADRDGFIGAEDLQCALARLGVRQDAAACRAMVVA
AGGGRDARMSLFQFVRFLENGLC

Transcript Sequence

Transcript ID

Zm00001d022234_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:173373975:173374586:1 gene:Zm00001d022234 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand family protein

Sequence

ATGGCCGAGAGGACGAACGCGATGGCGGCGCCGCGGCCGCTCCTGCGCCGGATGCTCTCG
TTCCGGGAGCCGCTCCTGGTCATCCCGTACCTGCTCAGCTTCCTGGGCGCCGCGGCCTCG
GCGCTGGCGCGCAGCCACTCGTCGCTGCTGCACTCGCTCGCCAGGGCGCTGTTCCCGGCC
GCGCCTGCCGCCGCCAACGCCAAGCACGCGCCGCCGCCTGCCGCTGCCGCTGCCGCTGCC
GCCGCGGCGCCCCTGGACGGCGAGGACGCCGCGCTGAGCAAGGCGGAGGTGGAGGCCATC
ATGGCTACGATCGGCCTCGCGGCGGCCGGGAAAGGCGAGGGCCTCGCGGCCGCCATGGGC
CGCGACGAGGTGTCCGCGCTCTTCGACGCCGACGAGCCCAGCTTCGCCGAGGTGCGGGGC
GCCTTCGCCGTCTTCGACGCCGACCGCGACGGCTTCATCGGCGCCGAGGACCTGCAGTGC
GCCCTGGCGCGGCTCGGCGTCAGGCAGGACGCCGCCGCGTGCCGCGCCATGGTCGTCGCG
GCCGGCGGCGGCCGGGACGCCCGGATGAGCCTGTTCCAGTTCGTCAGGTTCCTCGAGAAC
GGCCTGTGCTGA