Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022205_T013
CDS Infomation	cds chromosome:B73_RefGen_v4:7:172833151:172840484:1 gene:Zm00001d022205 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RKP
Sequence	ATGGTTGTCAATGGGACTTTCAACAACACTGTGCTTGTTTCATTGTACACAGTAATCCTG CATTTGTTGTCTGAAGGATTTTCTATGGATTCTGCTGGATCTGCATCATCCTCTAAAGCG AACTTTGGGAATGGTGTTGGATTTCTTCACAAAGGTGGAAAACGCAAGTTTCCGACACAA TTATTTTTCAGGAATGATGCCTATCACAGTGTAATTCCTAGAATCGGTGGACCACCAAGT ATTTTGATGCATCACCAATTTGATGCTGTGGAAAATGAAGTGCAGTGGGATGAAGGCTGC ATGAATGATGAAGAGACACGTGTTACACACACTACAGCACAGAAGCCTTGTTGCTGCTCA GTGACAGATGTTGCTGTTGGCCTAAGATACAAAGAAACTGCTAAGTATGTGCCATCAACT TCAAAAGGCTCATGTAAGCCTATGCCTGAAAGATCTCCTCATGTTGCTGCTGAGTGCAAT GGTAGAGGTCTGAGTGATGAGATCGAAGACAAACCTAGCACAAGTGCTCAATCAGAAATT GAATATGGATACCAATCACTGCATAGTCTTGAAAACATGCCAATGGCAACTCAATCTTCG TCGGAAACACTTAAAGAAGAAGAGCTGCTTGATGTTATGTTGTTGTTATATCATCTCGGC ATCTCACCAAATTTTAGGCAGGCATTTTATTTCATGTCTCAGCAGTCGCAGTCCATTTCT TTACTAGAAGAAACTGACAGGCAGATACGAGAAAAATCATGCTCAGAGCAAGTAAGGCGT TTGAAAGAAGCCCGGAATAGCTATCACGAGGATTTGGTAGATTGTGTACGGCATTGTGTT TGGTACCGGGCCACCCTTTTCTCCCAGTGGAAGCAAAGGGGAATGTACGCAACTTGCATG TGGGTCGTGGAGCTTCTTTTGGTCCTTAGTAACTCAAATAGCATGTTCCACTATGTTCCT GAGTTCTATGTGGAATCACTGGTGGATTGTTTCCATGCACTGCGAAGGAGCGATCCTCCT TTTGTTTCCCCTGCATTATTTCTCATGCAAGGGTTGGCCTCGTTTGTCACTTTGGTTGTC AAGCACTTCGATGATACAAGGATAGTGAACCCTGACTTGAAAGATCTTCTTCTTCAATCA ATATCAGTTCTCGTACAGTATAAAGAATTCATGCTTGTTTTCGAGAACAATCGGGAGGCT ATAAATAAAATGCCTAGATCACTGTTATCAGCTTTTGACAACAGATCATGGATTCCTGTT ACAAACATACTTTCCCGGTTCTGCAAAGGCTCAGGATTTGCTTCCTATAAGAATGGTGAA TCCGCATCATCTGCAACTTTTCAGGTTCTACTGAGGGAGACATGTATTCATGAACAAGAG CTGTTCTTTTCCTTTCTTAATCGACTTTTCAATACACTCAGCTGGACAATGACCGAGTTC TCTATGTCCATCCGGGAGATGCAAGATAAAAACCAGGTTGCTGATTTGCAGCAGAGGAAG TGCAGTGTAATTTTTGATATCTCATGTAGCCTTGCGAGAATCTTGGAATTCTGTACCCGA GAGATTCCTTGTGCTTTTCTCATGGGACCAGATATGAATTTGCGGAGGTTGACTGAATTG GTTGTCTTTATTCTCAACCACATCATATCAGTAGCTGATGCAGAGTTCTTTGACATGACA CTAAGACGGCCAGGGCAGCATCAAGAGAAAACAAATCGTACTATGATCTTGGCTCCTCTT GTGGGCATTATCCTCAGTCTTATGGAATGTAGCAGCACATCAGAACGAAGGGAGCTAAAT GATGTGATTGCAGTGTTCGCCAGCATGGATTGCCCTGCCACAATCCATTTTGGGCTGCAG TACCTACTGAGCTACAACTGGGTTTGTTTTCTTTCGCATTCTCTCTCTATTTTGTATCTT CTTCCTTGA

Peptide Sequence

PEP ID	Zm00001d022205_P013
PEP Infomation	pep chromosome:B73_RefGen_v4:7:172833151:172840484:1 gene:Zm00001d022205 transcript:Zm00001d022205_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RKP
Sequence	MVVNGTFNNTVLVSLYTVILHLLSEGFSMDSAGSASSSKANFGNGVGFLHKGGKRKFPTQ LFFRNDAYHSVIPRIGGPPSILMHHQFDAVENEVQWDEGCMNDEETRVTHTTAQKPCCCS VTDVAVGLRYKETAKYVPSTSKGSCKPMPERSPHVAAECNGRGLSDEIEDKPSTSAQSEI EYGYQSLHSLENMPMATQSSSETLKEEELLDVMLLLYHLGISPNFRQAFYFMSQQSQSIS LLEETDRQIREKSCSEQVRRLKEARNSYHEDLVDCVRHCVWYRATLFSQWKQRGMYATCM WVVELLLVLSNSNSMFHYVPEFYVESLVDCFHALRRSDPPFVSPALFLMQGLASFVTLVV KHFDDTRIVNPDLKDLLLQSISVLVQYKEFMLVFENNREAINKMPRSLLSAFDNRSWIPV TNILSRFCKGSGFASYKNGESASSATFQVLLRETCIHEQELFFSFLNRLFNTLSWTMTEF SMSIREMQDKNQVADLQQRKCSVIFDISCSLARILEFCTREIPCAFLMGPDMNLRRLTEL VVFILNHIISVADAEFFDMTLRRPGQHQEKTNRTMILAPLVGIILSLMECSSTSERRELN DVIAVFASMDCPATIHFGLQYLLSYNWVCFLSHSLSILYLLP

Transcript Sequence

Transcript ID	Zm00001d022205_T013
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:172833151:172840484:1 gene:Zm00001d022205 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RKP
Sequence	TCATAGGATGGTTGTCAATGGGACTTTCAACAACACTGTGCTTGTTTCATTGTACACAGT AATCCTGCATTTGTTGTCTGAAGGATTTTCTATGGATTCTGCTGGATCTGCATCATCCTC TAAAGCGAACTTTGGGAATGGTGTTGGATTTCTTCACAAAGGTGGAAAACGCAAGTTTCC GACACAATTATTTTTCAGGAATGATGCCTATCACAGTGTAATTCCTAGAATCGGTGGACC ACCAAGTATTTTGATGCATCACCAATTTGATGCTGTGGAAAATGAAGTGCAGTGGGATGA AGGCTGCATGAATGATGAAGAGACACGTGTTACACACACTACAGCACAGAAGCCTTGTTG CTGCTCAGTGACAGATGTTGCTGTTGGCCTAAGATACAAAGAAACTGCTAAGTATGTGCC ATCAACTTCAAAAGGCTCATGTAAGCCTATGCCTGAAAGATCTCCTCATGTTGCTGCTGA GTGCAATGGTAGAGGTCTGAGTGATGAGATCGAAGACAAACCTAGCACAAGTGCTCAATC AGAAATTGAATATGGATACCAATCACTGCATAGTCTTGAAAACATGCCAATGGCAACTCA ATCTTCGTCGGAAACACTTAAAGAAGAAGAGCTGCTTGATGTTATGTTGTTGTTATATCA TCTCGGCATCTCACCAAATTTTAGGCAGGCATTTTATTTCATGTCTCAGCAGTCGCAGTC CATTTCTTTACTAGAAGAAACTGACAGGCAGATACGAGAAAAATCATGCTCAGAGCAAGT AAGGCGTTTGAAAGAAGCCCGGAATAGCTATCACGAGGATTTGGTAGATTGTGTACGGCA TTGTGTTTGGTACCGGGCCACCCTTTTCTCCCAGTGGAAGCAAAGGGGAATGTACGCAAC TTGCATGTGGGTCGTGGAGCTTCTTTTGGTCCTTAGTAACTCAAATAGCATGTTCCACTA TGTTCCTGAGTTCTATGTGGAATCACTGGTGGATTGTTTCCATGCACTGCGAAGGAGCGA TCCTCCTTTTGTTTCCCCTGCATTATTTCTCATGCAAGGGTTGGCCTCGTTTGTCACTTT GGTTGTCAAGCACTTCGATGATACAAGGATAGTGAACCCTGACTTGAAAGATCTTCTTCT TCAATCAATATCAGTTCTCGTACAGTATAAAGAATTCATGCTTGTTTTCGAGAACAATCG GGAGGCTATAAATAAAATGCCTAGATCACTGTTATCAGCTTTTGACAACAGATCATGGAT TCCTGTTACAAACATACTTTCCCGGTTCTGCAAAGGCTCAGGATTTGCTTCCTATAAGAA TGGTGAATCCGCATCATCTGCAACTTTTCAGGTTCTACTGAGGGAGACATGTATTCATGA ACAAGAGCTGTTCTTTTCCTTTCTTAATCGACTTTTCAATACACTCAGCTGGACAATGAC CGAGTTCTCTATGTCCATCCGGGAGATGCAAGATAAAAACCAGGTTGCTGATTTGCAGCA GAGGAAGTGCAGTGTAATTTTTGATATCTCATGTAGCCTTGCGAGAATCTTGGAATTCTG TACCCGAGAGATTCCTTGTGCTTTTCTCATGGGACCAGATATGAATTTGCGGAGGTTGAC TGAATTGGTTGTCTTTATTCTCAACCACATCATATCAGTAGCTGATGCAGAGTTCTTTGA CATGACACTAAGACGGCCAGGGCAGCATCAAGAGAAAACAAATCGTACTATGATCTTGGC TCCTCTTGTGGGCATTATCCTCAGTCTTATGGAATGTAGCAGCACATCAGAACGAAGGGA GCTAAATGATGTGATTGCAGTGTTCGCCAGCATGGATTGCCCTGCCACAATCCATTTTGG GCTGCAGTACCTACTGAGCTACAACTGGGTTTGTTTTCTTTCGCATTCTCTCTCTATTTT GTATCTTCTTCCTTGATCTGGTTGATTTTTAGTTTTTACTTGTGTTTTTTTTGTTTGCTA TGTTGTTGACACGGTGTTCGATCATGCATGTATTTCTGCAGAGCAATGTTCTTCGAGGGG ATTCATCCCTTGCAAAGCTAGCGCAGCTTAAAGAGTTCTCCCATTACTTCCGACGCATTA CAGCGTCCGTGGATGGTGAAGAAGAAGACCATAGCCTAAACGCGGGCGATGAAGACGACG ACCACACTTGTTGCATTTGCTACAACTGTGATTCCGATGCAACATTCCAGCCATGCCATC ACCGGTCCTGCTTTGGCTGCATAAGCAGGCATCTCCTGAACAACCAGAGGTGTTTCTTCT GCAATGCAGTGGTAACATCGGTTACTAGATAGCCGATTCGCGAGCGATGCGCTGCTCTAC TCATTGCCTCTTTCGGTATCGTGATCCGAAGGAAGATGGTGCCACTGATTTGTCTTATCT ATTTTGCTTGACCTGAGGGCTGGGGCGCTGGCGTCCCAGAGATCTTTCCATTGCTTTTCC AGGAAGAACGCGTTACCTTTGTGCACGAGGGTCAGAAGCGGTTCTTCGTTTTCCTTGCTG TATATGTAAAGGCCAGGTAATAGTAGAAAGGATTCAATAACATTGCCGCAGAAGGAGGTT TCTGTACACGGTGGGAAGCCAGTACCACCGAAAGGAATTTCATGGAATCGCAATTTTTGT AGGGTGTAGGGGGAGATTCCACGACTGTAAATATGATGAGATATGAAACAGAAAAGGGGG TGGCAGATCAACATCGACCTTCTGTAATTAGCCAGAATAAAAGAACTAGATGCTTTATAT TGAGCAGAGCTCTCGTCTTTTTGATCCTCCCCACGGTGTAGTATCAAGAATGAATAAATC TTCTGTTTCTTGTCTGGTTGTAGCATGCCAGCATCTGTAAGTTGTAACAATTCAGTGAAT TTATTTACCTTCAGCAAAAAGG