Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022198_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:7:172636407:172650238:1 gene:Zm00001d022198 gene_biotype:protein_coding transcript_biotype:protein_coding description:SAP domain-containing protein
Sequence

ATGTTGACATATCCTATATTGAACGACCGATCAATTGATCAGTGGACGGTTACTGAGTTG
AAGGATGAGCTTGAGCGAAGGTATCTGCCTGTCAGTGGTTCGAAGGATGAGCTTTTGAAG
AGACTCTTTGAGGCCATGCAGGATGAGATACTTGATGGTGAGGGAAAAACAACTGTTGTA
ACTTCCCCTCCTGAGGAATTGAAAGGTGGTGAAACTCCTGGTTCCATTGATGTATCTGTT
AACCAGGCTTCAATTGAGCAACATGTTCATAAAGGTGCTTCCGAGGTTGCGAAACAGGGG
GTAGGTCTTGTTATCTCTGTTACAGAAGCTTATGATGAAAGTACATTTGCTACTTCAGAA
GTTACTCAGGAGGCTGTGGTTGGTACTGCAGAAGTTAGTCAGAGAAGTTTGGATGCTGTT
GCAGAAGTTGAGTCTTGTCTAGTTGATGCAGCTGCAACTGATGAACCCGATGGTAATGGT
CAAGGTTCAGCTTCAAGTGGTGATACTATAGTGAAGGAAGGAAGTCCGCGCTCTGAAGGT
CATGGCAATACTATTGAGAAGACCCCAGAAGATGGCACCAATAAGAAAATAGCTGTCGAT
GATGAACCTTCTGACCTTACTGGTGGTGACATCAAGTTGGGCCTCGATGTGCACAGCAAG
ATTCTAAAGCTGGAAGATGAACCCGCACCTCCTCATGATATGTTGCATAATCATGAGGAT
TCTGATGTTGTTGCAGTTGCTGAGCCAGAAGATGACACAAGCAAAAAAATGATAAGTGAT
GATGTACCGACTGGTCTTATGCATACCAATGTTGAGTTAGGTGCCAAGGTAGACTGCAAA
ATTGAACAGGAAGAAGTATCAACATTGTCTGATGCTGCTGCATTGCATTCTTATCCTAAG
GAACATATTGTGGCTGTGGCAAAAGGCCTTGCGCTCCCAAGGAGGATGCTGATGTCAGGC
TACACAAGTAATATAGACTTGGACAGAAAAGAGGAGAGTCCTGACATAAATTCTTGTGAG
AAACTGAACTTAAATAGGAGTTCAGGTGATGAATCAATGGATGAGGATGTGATGGAAAGG
AAGCATGCCGATTCCTATATCAAACCTGAAGATCTTAGAGGAAAGACAAAGGTTACTTCG
GAGCATGTGTTTAAAGATGTTTCTCTGCTTGATACTCGTGCTGAGGGTTCCCCTGCACAC
TCAAAGGAAGTTGTCACTGAAGAGAAGCTATCAACTCCAACTGAAAAGAGGAAACTTGAA
GATCAAGAAGTCATTGAAAATAATGAGCCAATCAAACGCCAGTACCTATGGAACGAGGAT
GCTGTCAATATTTCTGATCAACAAGCATCCAAAATAACTAGTACTGGTACTCAGAAGGAA
GTTATTTGTCCTGCTCCAGAACGTTCTTTTGGCAGGCCTAATACAGTAGCAAGAAGAAAT
TCTCCAAAGGAGCGGATTGTACCACCTGCCAAAACATCCGCAACAACTTCTTTAAGAATT
GATCGGTTTGTGCGCCCATTTACTCTGAAAGCTGTGAAAGAACTTCTTGGTAAAACTGGA
TCCATCTGCAGTTTTTGGATGGATGAAATCAAGACTCACTGCTATGTCACATACTCTTCA
GTGGAGGAAGCTGTGGCCACGAGGAATGCTGTCTACGACCTCCAGTGGCCCTCAAACAAC
AACAATTATCTGATCGCTGAATTTGTCGATCCAGAAGAGGTAAAGCTCAAACTTGAAACT
CCACCATCTCAAATTCCTCCTATCAGTCTGAGCACAGCTACAGCACAGCAGACAGCAACC
TTCCAACAGGCAATGGCTAACCAAACTCTAGTACCTCCCCATGTTCCTGCTACTTCGAGA
GGTTTATTGCCCACTCCAGCACGGTTTGCCAAGGTGCCTCCCACCTCTGACCCTGGACCA
GCAAGGGAGAGCCTTCCTCCCCCTCCACTGAGCCTGGAACCTGCCCGGACACTGGATGAG
CTCTTCAAGAAGACACAGACGTACCCAAGGATTTACTACATGCCACTGTCAGAAGAGGAG
GTATCTGCTAAACGTGCAGCTCACGACAAAGCTGTTTTCAGATGCAACCATACTTGTCAC
GGCACAGCGATCGACAGGCTCTCTTCTCCGCAGCTGACTCCACCAGACCAGCAGCTGCAG
CTCTATGAAGAACTACTGCACCGTACTTGTCCCTACATTTAG

Peptide Sequence

PEP ID

Zm00001d022198_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:7:172636407:172650238:1 gene:Zm00001d022198 transcript:Zm00001d022198_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:SAP domain-containing protein
Sequence

MLTYPILNDRSIDQWTVTELKDELERRYLPVSGSKDELLKRLFEAMQDEILDGEGKTTVV
TSPPEELKGGETPGSIDVSVNQASIEQHVHKGASEVAKQGVGLVISVTEAYDESTFATSE
VTQEAVVGTAEVSQRSLDAVAEVESCLVDAAATDEPDGNGQGSASSGDTIVKEGSPRSEG
HGNTIEKTPEDGTNKKIAVDDEPSDLTGGDIKLGLDVHSKILKLEDEPAPPHDMLHNHED
SDVVAVAEPEDDTSKKMISDDVPTGLMHTNVELGAKVDCKIEQEEVSTLSDAAALHSYPK
EHIVAVAKGLALPRRMLMSGYTSNIDLDRKEESPDINSCEKLNLNRSSGDESMDEDVMER
KHADSYIKPEDLRGKTKVTSEHVFKDVSLLDTRAEGSPAHSKEVVTEEKLSTPTEKRKLE
DQEVIENNEPIKRQYLWNEDAVNISDQQASKITSTGTQKEVICPAPERSFGRPNTVARRN
SPKERIVPPAKTSATTSLRIDRFVRPFTLKAVKELLGKTGSICSFWMDEIKTHCYVTYSS
VEEAVATRNAVYDLQWPSNNNNYLIAEFVDPEEVKLKLETPPSQIPPISLSTATAQQTAT
FQQAMANQTLVPPHVPATSRGLLPTPARFAKVPPTSDPGPARESLPPPPLSLEPARTLDE
LFKKTQTYPRIYYMPLSEEEVSAKRAAHDKAVFRCNHTCHGTAIDRLSSPQLTPPDQQLQ
LYEELLHRTCPYI

Transcript Sequence

Transcript ID

Zm00001d022198_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:172636407:172650238:1 gene:Zm00001d022198 gene_biotype:protein_coding transcript_biotype:protein_coding description:SAP domain-containing protein
Sequence

AGGAGGCACGCCATCTGTTCTTGCTGTCGCTCTCCCCAACCCCAAGCATAAACCCCTGTG
TCCTCGTACAAACCGAAACCGAAACCAAACTCCGCCACGAGTGGGGCGAGCGGATACACG
AGCTCGTGAAAGCTTGATCTGCTCTCCTTGTTTTCGATCTTTCGCAGTCGCCGATCCCCC
CTCCCGCTCGAGGTTGCTGTTTTTCTTTTTGAGATTTCCCCCGGATCTTTTCGGTGCTGT
TTTGTTGTTGTTTCGTTTCAGGATCGCGTAGTCTCGGCGATTTCCCCGAGAGTGGTTCTT
GGAACTTCAGGGTTGGAGGAATACGGTGTGCGCTAGACAGCAGTCTCCGCGGTTGTTGTA
CACTTACACAATGTTGACATATCCTATATTGAACGACCGATCAATTGATCAGTGGACGGT
TACTGAGTTGAAGGATGAGCTTGAGCGAAGGTATCTGCCTGTCAGTGGTTCGAAGGATGA
GCTTTTGAAGAGACTCTTTGAGGCCATGCAGGATGAGATACTTGATGGTGAGGGAAAAAC
AACTGTTGTAACTTCCCCTCCTGAGGAATTGAAAGGTGGTGAAACTCCTGGTTCCATTGA
TGTATCTGTTAACCAGGCTTCAATTGAGCAACATGTTCATAAAGGTGCTTCCGAGGTTGC
GAAACAGGGGGTAGGTCTTGTTATCTCTGTTACAGAAGCTTATGATGAAAGTACATTTGC
TACTTCAGAAGTTACTCAGGAGGCTGTGGTTGGTACTGCAGAAGTTAGTCAGAGAAGTTT
GGATGCTGTTGCAGAAGTTGAGTCTTGTCTAGTTGATGCAGCTGCAACTGATGAACCCGA
TGGTAATGGTCAAGGTTCAGCTTCAAGTGGTGATACTATAGTGAAGGAAGGAAGTCCGCG
CTCTGAAGGTCATGGCAATACTATTGAGAAGACCCCAGAAGATGGCACCAATAAGAAAAT
AGCTGTCGATGATGAACCTTCTGACCTTACTGGTGGTGACATCAAGTTGGGCCTCGATGT
GCACAGCAAGATTCTAAAGCTGGAAGATGAACCCGCACCTCCTCATGATATGTTGCATAA
TCATGAGGATTCTGATGTTGTTGCAGTTGCTGAGCCAGAAGATGACACAAGCAAAAAAAT
GATAAGTGATGATGTACCGACTGGTCTTATGCATACCAATGTTGAGTTAGGTGCCAAGGT
AGACTGCAAAATTGAACAGGAAGAAGTATCAACATTGTCTGATGCTGCTGCATTGCATTC
TTATCCTAAGGAACATATTGTGGCTGTGGCAAAAGGCCTTGCGCTCCCAAGGAGGATGCT
GATGTCAGGCTACACAAGTAATATAGACTTGGACAGAAAAGAGGAGAGTCCTGACATAAA
TTCTTGTGAGAAACTGAACTTAAATAGGAGTTCAGGTGATGAATCAATGGATGAGGATGT
GATGGAAAGGAAGCATGCCGATTCCTATATCAAACCTGAAGATCTTAGAGGAAAGACAAA
GGTTACTTCGGAGCATGTGTTTAAAGATGTTTCTCTGCTTGATACTCGTGCTGAGGGTTC
CCCTGCACACTCAAAGGAAGTTGTCACTGAAGAGAAGCTATCAACTCCAACTGAAAAGAG
GAAACTTGAAGATCAAGAAGTCATTGAAAATAATGAGCCAATCAAACGCCAGTACCTATG
GAACGAGGATGCTGTCAATATTTCTGATCAACAAGCATCCAAAATAACTAGTACTGGTAC
TCAGAAGGAAGTTATTTGTCCTGCTCCAGAACGTTCTTTTGGCAGGCCTAATACAGTAGC
AAGAAGAAATTCTCCAAAGGAGCGGATTGTACCACCTGCCAAAACATCCGCAACAACTTC
TTTAAGAATTGATCGGTTTGTGCGCCCATTTACTCTGAAAGCTGTGAAAGAACTTCTTGG
TAAAACTGGATCCATCTGCAGTTTTTGGATGGATGAAATCAAGACTCACTGCTATGTCAC
ATACTCTTCAGTGGAGGAAGCTGTGGCCACGAGGAATGCTGTCTACGACCTCCAGTGGCC
CTCAAACAACAACAATTATCTGATCGCTGAATTTGTCGATCCAGAAGAGGTAAAGCTCAA
ACTTGAAACTCCACCATCTCAAATTCCTCCTATCAGTCTGAGCACAGCTACAGCACAGCA
GACAGCAACCTTCCAACAGGCAATGGCTAACCAAACTCTAGTACCTCCCCATGTTCCTGC
TACTTCGAGAGGTTTATTGCCCACTCCAGCACGGTTTGCCAAGGTGCCTCCCACCTCTGA
CCCTGGACCAGCAAGGGAGAGCCTTCCTCCCCCTCCACTGAGCCTGGAACCTGCCCGGAC
ACTGGATGAGCTCTTCAAGAAGACACAGACGTACCCAAGGATTTACTACATGCCACTGTC
AGAAGAGGAGGTATCTGCTAAACGTGCAGCTCACGACAAAGCTGTTTTCAGATGCAACCA
TACTTGTCACGGCACAGCGATCGACAGGCTCTCTTCTCCGCAGCTGACTCCACCAGACCA
GCAGCTGCAGCTCTATGAAGAACTACTGCACCGTACTTGTCCCTACATTTAGCTGGTATT
GTGTTGAAAGGCTTTAGTAGTTTGTTGTGAGGGAAGACCTGATTGGGTACGTGGTATTTT
GGAGTTAAGGATACCGTGGCTTCTCCAAATCACGATGGCGTGTAATTTTGGCATTCCATA
GAGTACCACGGTTTCTCAAAACTAAGATGATGACAAAACATCAGGGATTTGGGTCCAAGT
GATGGTGTAAATGCAGAAAATTGACAGCATTTTGGCTTCTCCAAATCACGATGGCTCGTT
GAGTACTTTTCATGCTC