Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022194_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:172576703:172579347:1 gene:Zm00001d022194 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence

ATGGAGGCGGTGGTGCGGAAGGTGCAGCAGCGGGTGAGGAAGGCGCGGGAGGAGATGGAT
CAGTGGGATGACCTCAACACTCGGCTCCTCTCCCAATTCTCCAATGCTGCCGCGGTCATC
TCTCGCCTTCAGGCCCTTGGAGAGGACAAGAATTATGGCCCCTTGCGTGCTGTACCCAAC
ATCAGAGTGGACCTCATTGGGAACCAGATGGAGGTTCTGGAGCTCATTTTCGTTAAAATT
AGGGAGACACTGGAGAAGTTCAATGACGTCGTGAAAGCTTTAAATAAGGCTCTGCGTGAT
ACCAAGCAGATGGTGAGAGGCGGGTCGGCACTCACGGCGAAACAGATGCAGTTACAAGTT
GGAATTTTGCCATCGATTGCAGAATGCTTGGATGGATTTCAAACATTATGTGAAATGCAC
CATGATGAGTTTACGCTAAAATCATCAGCTATCTCCTTGCTGACTTGGAAGACATGTTCC
AGTGACATTGCTGTACTACGCCAACTCTTAGTAGACCAGCCAAACATTCCAAAAGATGAA
GTCCAATCCATATTCGACATTATATTTGCAGATGAAATTTGTTGA

Peptide Sequence

PEP ID

Zm00001d022194_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:172576703:172579347:1 gene:Zm00001d022194 transcript:Zm00001d022194_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence

MEAVVRKVQQRVRKAREEMDQWDDLNTRLLSQFSNAAAVISRLQALGEDKNYGPLRAVPN
IRVDLIGNQMEVLELIFVKIRETLEKFNDVVKALNKALRDTKQMVRGGSALTAKQMQLQV
GILPSIAECLDGFQTLCEMHHDEFTLKSSAISLLTWKTCSSDIAVLRQLLVDQPNIPKDE
VQSIFDIIFADEIC

Transcript Sequence

Transcript ID

Zm00001d022194_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:172576703:172579347:1 gene:Zm00001d022194 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence

ACATATCACCCGCTTCCCTCTGTTGAATCCTCCTTCCGCGCCGCCGCCATCTCCTCCTCC
TCTGACTCCGGCGGCCTCACGCCCTCCTCACGCTCCGCAACGCCGTACCTGGATGTTGGT
TTCTACTTCGACTCTCCGAGGGATAGAGAAGAGACCCAGTGCCACAAGGTTCCCGTAGTC
TGTAATCGGGGAGCTGAGAATCTAGGCCATAGGCTTCTTGAAGCCGTTGGGAGACAAAGG
AGGCCGGACGAGCGAGCGAACAACCAGATGGAGGCGGTGGTGCGGAAGGTGCAGCAGCGG
GTGAGGAAGGCGCGGGAGGAGATGGATCAGTGGGATGACCTCAACACTCGGCTCCTCTCC
CAATTCTCCAATGCTGCCGCGGTCATCTCTCGCCTTCAGGCCCTTGGAGAGGACAAGAAT
TATGGCCCCTTGCGTGCTGTACCCAACATCAGAGTGGACCTCATTGGGAACCAGATGGAG
GTTCTGGAGCTCATTTTCGTTAAAATTAGGGAGACACTGGAGAAGTTCAATGACGTCGTG
AAAGCTTTAAATAAGGCTCTGCGTGATACCAAGCAGATGGTGAGAGGCGGGTCGGCACTC
ACGGCGAAACAGATGCAGTTACAAGTTGGAATTTTGCCATCGATTGCAGAATGCTTGGAT
GGATTTCAAACATTATGTGAAATGCACCATGATGAGTTTACGCTAAAATCATCAGCTATC
TCCTTGCTGACTTGGAAGACATGTTCCAGTGACATTGCTGTACTACGCCAACTCTTAGTA
GACCAGCCAAACATTCCAAAAGATGAAGTCCAATCCATATTCGACATTATATTTGCAGAT
GAAATTTGTTGACCACCAACTCATAGTATTTGATTGTTGAAGCCTTGCCCCCTATGTTCT
GATCAAGCTGCCTTCTCAGGTGAGACCGAGTCAGTGTGGAAACTTTATGTTAACCCAATT
GTTGAGGCATTGTGGACGAGGCAAGTCTTCATCTCTGTCAGCAATCGGTGATTGAAGACC
CAGAGGCCGGACCTGACCATTGTGTGCCGGTCACCGGAGTGTGAGTGGTCTGAACTTGGG
ATGGTAATGGCTTTGCCTGTCCATCCTGCGGGGTGTGGACAGTGATAGAACTTGAACAGG
CTTGACCCCTCCTAGCAAGGGATTGTGAATTGTGATCACCAATCCATGGTTCAGACTTGC
ACCAATCATGTGGCTTGCGTTTTTTAGAAATAGGTGCACCATTGCCTCTTCCAGGTGGTG
CCCAGAAGGTTTCGACCAAGGTCTGTGAAAGAAGCACTTTGCAATCAGCGGTGGGTTCAG
ATATATCACATGAACGAGCAGACAAGGAAACATTCTAACTTGGAAAAAGTTTCTATTGGG
TTCTATTCGGCAATGGAAAAACGGTGTATCATGTAAATTAAACTATACTAGTTCACTTTG
GTTTTGTAAGTTAAACTTCTTTAACGCTGATCAAGACAATACCCTAAAAAA