Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022179_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:7:171984117:171989742:1 gene:Zm00001d022179 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SnRK2 serine threonine protein kinase2 description:Serine/threonine-protein kinase SRK2C
Sequence

ATGGAATATGCTGCTGGTGGTGAGCTATTTGAAAGGATCTGTAATGCTGGAAGATTTAGT
GAGGATGAGGCGAGATTTTTCTTCCAACAACTGATTTCAGGAGTTAGTTATTGCCACTCA
ATGCAAATATGCCATAGAGATTTGAAACTAGAAAACACTCTCCTGGATGATAGTATAGCA
CCTCGGCTAAAGATATGTGATTTTGGTTACTCCAAGTCCTCTGTGCTGCACTCTCAACCA
AAATCAACTGTCGGGACACCAGCTTACATTGCTCCTGAGGTCCTTGCTAGAAAGGAATAT
GATGGAAAGGTCGCCGATGTTTGGTCATGTGGAGTTACTCTGTATGTGATGCTTGTTGGT
GCCTATCCCTTTGAGGACCCCGACGAACCGAAGAATTTCCGCAAGACGCTTACTCGGATT
ATCAGCGTCCAGTACGCGGTTCCTGATTTTGTCCGAGTTTCAATGGAGTGCAGGCATCTG
CTGTCTCGGATCTTTGTGGCGAAACCTGAGCAACGGATAACCATCCCAGAGATCAAGAAC
CACCCATGGTTCCTGAAGAACCTGCCCATCGAGATGACCGACGAGTACCAGATGAACCTA
CAGCTAGTCGACATGAATGTCCCCTCGCAAAGCCTGGAGGAGATCATGTCCATCATACTG
GAGGCCCGGAAGCCCGGCGACGGGCTGAAGCATGCGGGACAGCTCCCCGGCCTTGGGAGC
ATGGAGCTGGATGACATTGATGTTGACGACATAGACGTTGAGGACAGTGGCGACTTTGTA
TGTGCCTTGTGA

Peptide Sequence

PEP ID

Zm00001d022179_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:7:171984117:171989742:1 gene:Zm00001d022179 transcript:Zm00001d022179_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SnRK2 serine threonine protein kinase2 description:Serine/threonine-protein kinase SRK2C
Sequence

MEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDDSIA
PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLARKEYDGKVADVWSCGVTLYVMLVG
AYPFEDPDEPKNFRKTLTRIISVQYAVPDFVRVSMECRHLLSRIFVAKPEQRITIPEIKN
HPWFLKNLPIEMTDEYQMNLQLVDMNVPSQSLEEIMSIILEARKPGDGLKHAGQLPGLGS
MELDDIDVDDIDVEDSGDFVCAL

Transcript Sequence

Transcript ID

Zm00001d022179_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:171984117:171989742:1 gene:Zm00001d022179 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SnRK2 serine threonine protein kinase2 description:Serine/threonine-protein kinase SRK2C
Sequence

CCGGCCGGCCCTATCAAAAGCTGGCCCCTTCCACAGCGCACTCCCTCACCTTCCTCCACG
GCTCCACCATCCCCTCTCCCCTGCCCTGCCCCCACCGCCCCGCTTCCTTCCGCCTTGCTC
CGTTGCTTCCTCCCACCACAGTCCACTCCACTCGCCGGCCCTGCAGCTCAGTATTTGACT
GAGACTGGTGGTGGAGCTGCTAGCAGCGAGCCTGCTACTTCCTGGTCCTGACGGTGCGTT
CAGACCTCAGACCAGTGCCGACGACGAGCTGTGAGGAGAGGGCAAGGAAACAAGCCTGTG
AGGAAGGCGGCGATGGAGAGGTACGAGGTGATCAAGGACATAGGATCGGGCAACTTCGGG
GTGGCCAAGCTGGTCCGGGACGTCAGGACCAAGGAGCTCTTCGCCGTCAAGTTCATCGAG
CGGGGGATGAAGATTGATGAGAATGTCCAAAGGGAGATCATGAACCACAGGTCACTGAGG
CATCCAAACATAGTTAAATTTAAGGAGGTACGTCCTATTTTGCCTATGAGACAGCAATAC
AAACTTAGATTCAGCAGCGCAGTCTGGTAAATTTGAAATGTTCCATTTCTGAATTCGTTA
ATGCCTTCTGTTTCATATTGCATTGAATGTTATAAAAACATCTCATAAGAGCTGCTGGAG
AATTCTATAATTATTGTACGGGAAAATATCTACCTTGTGCATTTATTACACATTCTTTGG
AATTCTAAAAACTCGGCCGGGGAGGGAAAGACCGCCCTCCCGGTATTATATTAAGAAGAG
ACCGAAACAATGGTCCCGGCCGAGAAAATCCCCGAACCCTGGCCCCCCATCACTAACGGG
CCGGCGTCAACTGTCCACTCTGCAACGGCCCAACCGGAGGGTGGCGCACAAGACATCGTA
ACCCGAGAGTGGATGTGGCACAGCGAGGTGATTTTTTTAACCAAGCCTGAAAATTCGCTC
CCGAGGGGAATCGAACCCAGGACTTGGAGGTGCTACTTGGAAGTCCTTAACCACTAGGCT
AGAGGCCCTTTCGCTTCTTTGGAATTCTGAATCTGAGTTAAAATTGAAATACCTAAGAGA
ATATTCAGTTTTTGATTGACTAGATAAAAATAAAGTATGGTGTGATGCTCAACTTCATAA
ATTTTTGGGCTATCCCTCTCCCAGCAACAAAGTATTGTTTATACGTAACCCATTCTGCCT
TTTTTATTGGACAAATGAAGTGTGAGGCGAAAGTATCTACACGTTGCAAAGTTGAATGAA
TTTTCTGACAGCAAGTGTGTTCTATTATAGTCAGTCATATGTTTAGTGTAGTTGGTGTAA
ATGATACTTGTTTGGTAGAATAATTCCTTTAGATCAACAGTTCTAGAGTCATTGTCTGTT
TTTATGTGTAGGACTACTTGGTGGCAACTTGTTTCTATGGGTGTTGGATACTTGGATGTC
TATCAGCATTCAGCAGCTATGGGTAGCATGCACTAGTGCCATGCCCCTTGAGTCGGGGAA
GTGCTTATGGCATTTGGGCCTCGGAGTTTTTTTTGCCAATAACTCATATTTGTTGAGTGG
CTATAATGCAATGACTGAGTGACAGTTCCTTAGCAGTTAGCAGTCTGCTTTGTCCTCTTG
TTCTTCTGTTATATATTCTTGTTTGCACGGAATGCATGCCACTGTTTTTTGTGCTACCTG
ATTTGCCGTCGATAAAAGAGGTATCAACTAGGTAGAGTGAAGGAGAATTATCGCTGGATG
GTAATATCAACCAAAAATATCGAACTTCGGTCCATAGACTGAATTCCTTTTAACTTGTTT
TTTTCTCTCGCCAGGATTTCATAGCAGCACACCTTTAAGAAATGTTTCTCGCAACTAAGT
TCTTTGGAATGTAATTAGCTACAACAAGCATGGGTCAATTATGATTCTGGCAGTAACTTG
TATTCCTTTCAACTAGTTTGGCTGCAGTACCGGAGAAATACTTAGTGTACTGGTCATTGA
CGACAGTAAATTTCGTGGATTTAATTGGAGACCTCTTTATAATGCTAACAACATAGTTAT
CTCATGAAGCTTATTACTGCAGAAAATAGCAGGAGAGGGTCCAACCGTGATTATTACATT
TTTGTTTCAGAATTTAAATTTATTACCATTTCCAAACTACAAATTAAAAGAGAGGCTTAG
TTTTTCAGGTTGTGCTAACTCCCACACATTTGGCCATAGTTATGGAATATGCTGCTGGTG
GTGAGCTATTTGAAAGGATCTGTAATGCTGGAAGATTTAGTGAGGATGAGGCGAGATTTT
TCTTCCAACAACTGATTTCAGGAGTTAGTTATTGCCACTCAATGCAAATATGCCATAGAG
ATTTGAAACTAGAAAACACTCTCCTGGATGATAGTATAGCACCTCGGCTAAAGATATGTG
ATTTTGGTTACTCCAAGTCCTCTGTGCTGCACTCTCAACCAAAATCAACTGTCGGGACAC
CAGCTTACATTGCTCCTGAGGTCCTTGCTAGAAAGGAATATGATGGAAAGGTCGCCGATG
TTTGGTCATGTGGAGTTACTCTGTATGTGATGCTTGTTGGTGCCTATCCCTTTGAGGACC
CCGACGAACCGAAGAATTTCCGCAAGACGCTTACTCGGATTATCAGCGTCCAGTACGCGG
TTCCTGATTTTGTCCGAGTTTCAATGGAGTGCAGGCATCTGCTGTCTCGGATCTTTGTGG
CGAAACCTGAGCAACGGATAACCATCCCAGAGATCAAGAACCACCCATGGTTCCTGAAGA
ACCTGCCCATCGAGATGACCGACGAGTACCAGATGAACCTACAGCTAGTCGACATGAATG
TCCCCTCGCAAAGCCTGGAGGAGATCATGTCCATCATACTGGAGGCCCGGAAGCCCGGCG
ACGGGCTGAAGCATGCGGGACAGCTCCCCGGCCTTGGGAGCATGGAGCTGGATGACATTG
ATGTTGACGACATAGACGTTGAGGACAGTGGCGACTTTGTATGTGCCTTGTGACGCGGTT
CAGGCTGTCCGGCACCGTTGCTGCGGTGGACTCTCCCCCACTCTCCTGGTCTTTGTGTCT
TGCTGTTATTCCATGTTGTTTGTTTCAGCGAGCTCCGAGCTCCCATTTTGTTGTTGTAAT
ATCACATGTTTTGTGTAACCAAGGTAGTGACGCTGTGGATAAATAATAGACGTTATGTGT
TGTAT