Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022169_T025
CDS Infomation	cds chromosome:B73_RefGen_v4:7:171699590:171710958:1 gene:Zm00001d022169 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA polymerase T phage-like 1 description:DNA-directed RNA polymerase
Sequence	ATGCGCACCCATGGTGCTCGGCAACAGAGGGACGCTGTTAAAAGAGCTCCAAGGGAACAG ATGCAATTTGTTTTTGAGGCCTTGAATACTCTTGGGAGCACGAAGTGGAGGGTTAACAAA AGAGTTCTTAGCATTGTTGACAGAATCTGGTCAAATGGTGGCCGGCTTGCTGACTTGGTT GATCGTACTGATGTTCCTGTACCGGAGAAGCCTGACACTGAAGATGAAACCTTGCTAAAG AACTGGAAATGGCACTTGAGGGCAGCCAAGAAGAAGAACAGTGAAAGGCATTCTCAGAGA TGTGATGTTGAACTCAAACTTGCTGTTGCTAGAAAAATGAAGGATGAAGAGGGATTTTAC TATCCACACAACCTTGATTTTAGAGGTCGGGCTTATCCAATGCACCCTTATCTGAACCAT TTGGGTTCAGATCTTTGTCGAGGGGTTCTAGAGTTTGCTGAAGGTCGGCCACTTGGCAAG TCAGGATTGCGTTGGCTGAAGATACACCTTGCAAATTTGTATGCTGCTGGTGTTGATAAG TTGTCATATGATGGCCGGATTGCATTTGCTGAGAATCATTTGGAGGAAATATTTGATTCT GCTGATAGGCCTTTAGAAGGCAGACGATGGTGGCTTGGGGCTGAAGATCCATTCCAGTGC CTGGCAGTATGCATGAATCTCACTGAAGCTTTAAGAAGCTCGTCTCCAGAAACAACAATC TCACATATTCCTGTGCACCAGGATGGCTCTTGTAATGGTCTGCAACACTATGCGGCACTT GGAAAGGATAAGTTGGGAGCCATTGCTGTTAACTTAGTCGCTGGAGAAAAGCCTGCAGAT GTTTACACCGGAATAGCTAACAGGGTGATGGAAATTATGAGGATGGATGCACAAAAAGAT CCTTCTGTAGAACCTGATGCAGCTCGTGCTCGTCTGATAGTTGACCAGGTGGACAGAAAA TTGGTGAAGCAAACTGTGATGACATCTGTGTATGGTGTCACATATATTGGAGCACGTGAA CAAATAAGAAGAAGACTAAAGGAGAGGGGGGTCATTCCTAATGACTCCGAACTGTTTGGT GCATCATGCTATGCTGCTAAGGTTACTCTTACAGCACTTGGTGAGATGTTTCAAGCTGCC CGTAGTATCATGAACTGGCTTGGTGACTGTGCCAAGGTAATTGCTTGTGAAAATGAACCA GTGAGATGGACGACTCCTCTTGGGCTCCCAGTTGTACAACCATATCGCAAACTTGGGAGG CATCTTATTAAAACGTCATTGCAGGTTTTGACCCTTCAGCGGGAGACGGATAAGGTTATG GTGAAGCGGCAGAGGACAGCTTTCCCTCCAAACTTTGTGCATTCTCTTGATGGTTCTCAT ATGATGATGACTGCTGTTGCTTGCAAAAGGCAAGGTCTGAATTTTGCAGGAGTTCATGAT TCATATTGGACCCATGCCAGTGATGTTGATACAATGAATAAAATACTCCGGGAAAAGTTT GTGGAACTCTATGATACACCTATTCTGGAAAATCTGTTGGAGAGCTTTGAGAAATCTTTC CCTAAATTAAAATTCCCACCGTTGCCGGAGAGGGGAGACTTCGATATGAAGGAAGTCCTT GAGTCTACGTATTTTTTCAACTAG

Peptide Sequence

PEP ID	Zm00001d022169_P025
PEP Infomation	pep chromosome:B73_RefGen_v4:7:171699590:171710958:1 gene:Zm00001d022169 transcript:Zm00001d022169_T025 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA polymerase T phage-like 1 description:DNA-directed RNA polymerase
Sequence	MRTHGARQQRDAVKRAPREQMQFVFEALNTLGSTKWRVNKRVLSIVDRIWSNGGRLADLV DRTDVPVPEKPDTEDETLLKNWKWHLRAAKKKNSERHSQRCDVELKLAVARKMKDEEGFY YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDK LSYDGRIAFAENHLEEIFDSADRPLEGRRWWLGAEDPFQCLAVCMNLTEALRSSSPETTI SHIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKD PSVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTYIGAREQIRRRLKERGVIPNDSELFG ASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGR HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHD SYWTHASDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVL ESTYFFN

Transcript Sequence

Transcript ID	Zm00001d022169_T025
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:171699590:171710958:1 gene:Zm00001d022169 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA polymerase T phage-like 1 description:DNA-directed RNA polymerase
Sequence	GATATGACAAAGGAGCACACCTCTTTTTACCATCATATGTAATGCGCACCCATGGTGCTC GGCAACAGAGGGACGCTGTTAAAAGAGCTCCAAGGGAACAGATGCAATTTGTTTTTGAGG CCTTGAATACTCTTGGGAGCACGAAGTGGAGGGTTAACAAAAGAGTTCTTAGCATTGTTG ACAGAATCTGGTCAAATGGTGGCCGGCTTGCTGACTTGGTTGATCGTACTGATGTTCCTG TACCGGAGAAGCCTGACACTGAAGATGAAACCTTGCTAAAGAACTGGAAATGGCACTTGA GGGCAGCCAAGAAGAAGAACAGTGAAAGGCATTCTCAGAGATGTGATGTTGAACTCAAAC TTGCTGTTGCTAGAAAAATGAAGGATGAAGAGGGATTTTACTATCCACACAACCTTGATT TTAGAGGTCGGGCTTATCCAATGCACCCTTATCTGAACCATTTGGGTTCAGATCTTTGTC GAGGGGTTCTAGAGTTTGCTGAAGGTCGGCCACTTGGCAAGTCAGGATTGCGTTGGCTGA AGATACACCTTGCAAATTTGTATGCTGCTGGTGTTGATAAGTTGTCATATGATGGCCGGA TTGCATTTGCTGAGAATCATTTGGAGGAAATATTTGATTCTGCTGATAGGCCTTTAGAAG GCAGACGATGGTGGCTTGGGGCTGAAGATCCATTCCAGTGCCTGGCAGTATGCATGAATC TCACTGAAGCTTTAAGAAGCTCGTCTCCAGAAACAACAATCTCACATATTCCTGTGCACC AGGATGGCTCTTGTAATGGTCTGCAACACTATGCGGCACTTGGAAAGGATAAGTTGGGAG CCATTGCTGTTAACTTAGTCGCTGGAGAAAAGCCTGCAGATGTTTACACCGGAATAGCTA ACAGGGTGATGGAAATTATGAGGATGGATGCACAAAAAGATCCTTCTGTAGAACCTGATG CAGCTCGTGCTCGTCTGATAGTTGACCAGGTGGACAGAAAATTGGTGAAGCAAACTGTGA TGACATCTGTGTATGGTGTCACATATATTGGAGCACGTGAACAAATAAGAAGAAGACTAA AGGAGAGGGGGGTCATTCCTAATGACTCCGAACTGTTTGGTGCATCATGCTATGCTGCTA AGGTTACTCTTACAGCACTTGGTGAGATGTTTCAAGCTGCCCGTAGTATCATGAACTGGC TTGGTGACTGTGCCAAGGTAATTGCTTGTGAAAATGAACCAGTGAGATGGACGACTCCTC TTGGGCTCCCAGTTGTACAACCATATCGCAAACTTGGGAGGCATCTTATTAAAACGTCAT TGCAGGTTTTGACCCTTCAGCGGGAGACGGATAAGGTTATGGTGAAGCGGCAGAGGACAG CTTTCCCTCCAAACTTTGTGCATTCTCTTGATGGTTCTCATATGATGATGACTGCTGTTG CTTGCAAAAGGCAAGGTCTGAATTTTGCAGGAGTTCATGATTCATATTGGACCCATGCCA GTGATGTTGATACAATGAATAAAATACTCCGGGAAAAGTTTGTGGAACTCTATGATACAC CTATTCTGGAAAATCTGTTGGAGAGCTTTGAGAAATCTTTCCCTAAATTAAAATTCCCAC CGTTGCCGGAGAGGGGAGACTTCGATATGAAGGAAGTCCTTGAGTCTACGTATTTTTTCA ACTAGCACAATCAATGTTAACAGTTGCATTATACACGCTGCTGCCCGGACATATCTGAGT TCTGAGTGTAGATCTACCAACTCGAATGATGAAAGCTAGGTCATACATGAGCATAACCCG AAGAGTGGCTTTGCAGAAGTTATCAGAAGCTAAGTTGGTACTCTGAGCATTCACAAATGC ATCGGCATCATTTATCGCGTTGAAGTTGGCAATGAGGTTTGCTAAATAAAAGTGGGAACC ATATCAAAGTTAAACGAGAATCCCTGTAAATGTAATTATGTAATTTTTTTTTGTCTTTAG TGTTTTTATTTTCCTTGATCTTGGTACTGTCGAGAGAAATTCGGCTGACCGGTAGTTTGT CGGCTGGTGCTGAGTAGAGATTATTTCATACTTTGTAGTTTAACAATATAATTTAGTAAT AAAGTGATATACT