Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022144_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:7:171127649:171132477:-1 gene:Zm00001d022144 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-oxoacyl-[acyl-carrier-protein] synthase II chloroplastic
Sequence

ATGAACCCATTTTGTGTTCCTTTTGCAACTACGAATATGGGCTCTGCGATCCTTGCAATG
GATCTGGGATGGATGGGACCAAACTATTCTATTTCCACAGCTTGTGCTACCAGTAACTTC
TGTATCCTTAATGCAGCAAACCACATCAGAAGAGGCGAAGCTGACGTTATGCTCTGCGGT
GGTTCTGATGCACCTCTTATCCCAATCGGATTGGGAGGTTTTGTGGCATGCAGAGCTCTT
TCACAGAGGAACAGTGACCCAACAAAAGCTTCTCGGCCTTGGGACATGGGACGTGATGGT
TTTGTTATGGGGGAAGGGGCTGGTGTCCTCGTATTGGAAGAACTTGAGCATGCCAAGGAA
AGAGGTGCAACAATATATGCTGAATTTCTTGGTGGAAGCTTCACATGTGATGCTTACCAC
ATGACTGAGCCACATCCTGAAGGAAGAGGGATTACTCTCTGCATCGAAAAGGCACTAGCT
GATGCAGGGGTAGCAAGGGAAGAAATCAACTACGTGAATGCCCATGCAACATCTACACAA
GCAGGTGACTTGAAGGAGTATGAGGCTATCGTGCGCTGTTTTCGCCAGAACCCTCAACTG
AGGGTGAACTCGACCAAATCAATGACTGGGCATCTTATAGGAGCAGCTGGTGGAATAGAA
GCAGTTGCTTCTATACAAGCTATAAGAACTGGTTGGGTCCATCCAAATTTGAATTTAGAA
AATCCAGAGGACACCGTGGACGTGGGCGTCTTGGTAGGGTCACAGAAGGAGAGATGTGAA
GTGAAGGTGGCGTTGTCCAACTCATTCGGATTCGGTGGGCACAACTCATCGATTCTCTTT
GCCCCCTTTAAGTGA

Peptide Sequence

PEP ID

Zm00001d022144_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:7:171127649:171132477:-1 gene:Zm00001d022144 transcript:Zm00001d022144_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-oxoacyl-[acyl-carrier-protein] synthase II chloroplastic
Sequence

MNPFCVPFATTNMGSAILAMDLGWMGPNYSISTACATSNFCILNAANHIRRGEADVMLCG
GSDAPLIPIGLGGFVACRALSQRNSDPTKASRPWDMGRDGFVMGEGAGVLVLEELEHAKE
RGATIYAEFLGGSFTCDAYHMTEPHPEGRGITLCIEKALADAGVAREEINYVNAHATSTQ
AGDLKEYEAIVRCFRQNPQLRVNSTKSMTGHLIGAAGGIEAVASIQAIRTGWVHPNLNLE
NPEDTVDVGVLVGSQKERCEVKVALSNSFGFGGHNSSILFAPFK

Transcript Sequence

Transcript ID

Zm00001d022144_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:171127649:171132477:-1 gene:Zm00001d022144 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-oxoacyl-[acyl-carrier-protein] synthase II chloroplastic
Sequence

GTCCCTGTCCCTCCACTCCTCCCGTCGAGCACTTGGCACTGCCAATGGCGGCTCCCGCCC
ACACCCCTTCGATGCGCGCAAGCCACCTTCTTTCCCCGTGAGATCGACGCACCTCCCCCT
CTCGTGCTTCATTCCCGCTCGTCGTTCGTTTCTTCGGCCCCGAGCCGTCGCGCGGTCGCC
TCCACATCTCGTCGTGCTTTAAGGTCTTTGGCCTCCGCCGTTCTTGGACAGGGGCACACC
ACTGTCCACCGGTGCCCACTACGCGAAATACGAGTCCCTCGTGCGGCTCCGTAGGGTGGA
AGAGATCCATCAGGCGGTGAGTGGGAGGGGCGGCGTCCACACAACCGGAGGGGAGGGGGG
CAATGGCGGCCGTGGCAGGCCCACTCTGCACGTGGCTCGTCGCCGCGTGCTTATCTGCGG
CATGCGACGCTGAAGAGCACAAGCAGAAGCATTTCTGCGCAGGCGGAAGCCGCGCTGGGG
GCGGTGTCATGCTCGGCCAGCGCCGCCGCCTCGGCGCGCGGCGTCGCGGCTTGGCGCGCT
CTGGAATGACTATGGCTGTTGCCTTACAAGCTGAAAGAAGTGTCATTGAAAAGAAGAAAC
CCGATATCAAACAAAGGAGGGTGGTTGTCACTGGCATGGGTGTAGTGACACCATTGGGCC
ATGATCCTGACGTGTTTTACAACAATCTTCTTGATGGTGTTAGCGGAATAAGTGAGATTG
AGAGGTTTGACTGTTCCAACTTCCCCACGGTAATATGGAGCACATGATTCCCTTCAATCT
TTCCGGCAGTGGTGCTTGGGCTGGTTTCGCGATTTGGTCAAATGTTACCATACTGTGATT
GATATTTGGACTTTAATACAGAGAATTGCAGGAGAGATAAAATCCTTCTCTACTGATGGT
TGGGTTGCACCTAAACTTGCAAAGCGGATGGACAAGTTTATGCTATATCTGATAACTGCT
GGAAAGAAGGCATTAGAAAATGGTGGACTCACTGAAGAACTAAGGAATGAGTTGGACAAA
ACCAGGTGTGGGGTTCTTATTGGTTCTGCAATGGGTGGCATGAAGGTTCTATTCTTCCAG
TATACTAGTATTTAGTTGTATATCTCGATGAATTCCAACCATGCATGGAACATGGTTCCC
ATGTCCTGATACAAGTTATGATGGACTGTCGAGCAGGTTTTTAATGATGCAATTGAAGCA
CTGAGGGTCTCTTACAAGAAAATGAACCCATTTTGTGTTCCTTTTGCAACTACGAATATG
GGCTCTGCGATCCTTGCAATGGATCTGGGATGGATGGGACCAAACTATTCTATTTCCACA
GCTTGTGCTACCAGTAACTTCTGTATCCTTAATGCAGCAAACCACATCAGAAGAGGCGAA
GCTGACGTTATGCTCTGCGGTGGTTCTGATGCACCTCTTATCCCAATCGGATTGGGAGGT
TTTGTGGCATGCAGAGCTCTTTCACAGAGGAACAGTGACCCAACAAAAGCTTCTCGGCCT
TGGGACATGGGACGTGATGGTTTTGTTATGGGGGAAGGGGCTGGTGTCCTCGTATTGGAA
GAACTTGAGCATGCCAAGGAAAGAGGTGCAACAATATATGCTGAATTTCTTGGTGGAAGC
TTCACATGTGATGCTTACCACATGACTGAGCCACATCCTGAAGGAAGAGGGATTACTCTC
TGCATCGAAAAGGCACTAGCTGATGCAGGGGTAGCAAGGGAAGAAATCAACTACGTGAAT
GCCCATGCAACATCTACACAAGCAGGTGACTTGAAGGAGTATGAGGCTATCGTGCGCTGT
TTTCGCCAGAACCCTCAACTGAGGGTGAACTCGACCAAATCAATGACTGGGCATCTTATA
GGAGCAGCTGGTGGAATAGAAGCAGTTGCTTCTATACAAGCTATAAGAACTGGTTGGGTC
CATCCAAATTTGAATTTAGAAAATCCAGAGGACACCGTGGACGTGGGCGTCTTGGTAGGG
TCACAGAAGGAGAGATGTGAAGTGAAGGTGGCGTTGTCCAACTCATTCGGATTCGGTGGG
CACAACTCATCGATTCTCTTTGCCCCCTTTAAGTGAACATGACCGAGGCGAAGAACCGAC
ATCTTCATCATCGCGCAAATGGCTTCATATATCTGGAACTCCACATAGAAATCTGGTGGA
TTCTGCAACTTCCTCCGTGCCACACATACTGCATATGGAGGTCCAAAGTGAGGGTACAAT
ACTATGCCACACACATTTGAGCGAACAAAACATCAGCCCCCCTACATGTTTCATCTACTA
TCACAAAGTTGCAAAATATATATGGTAACTATCAAAGAACTTACCGTACCTGGGCCAGTG
TTTTCGCCTTCACCATACCTGCCCATTGTCAGTACTATTTCCTACATTTGGTGTAGTCCC
GTAGCTTAATCCTCTTCCCTGCGGAGGTGATGGGATCTTATGTTGTATTGTTGTTGCCAA
CAGTATCGTTATTAGCCATGAATTGCTGGTTC