Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022131_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:7:170934652:170939069:-1 gene:Zm00001d022131 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type 6

Sequence

ATGACCAGCGTTTCGCGCCTGTTCCCGATCACCGACCGGCTGGGGTTGCTCGCCACGGGG
ATCGCAGGTGAGGGGAGAGCATTGGCACATGAGGCAAGGAATCAAACTGCAGAATTTCGT
TTCAATTGGGGATATGAAATGCCTCCTGATGTTTTGGCACAATGGATTGCAGACAGAGCA
CAGATCTGGACCCAGTATGTTTCCAAGAGACCTTCTGGAGTTGTTGCCATGATTCTGGGC
ATTGATGATGAGAAAGGAACTCCACAACTCTTTACATGTGATCCTGCTGGGTATTTTTTC
GGTCACAAGGCAGCAAGTGCTGGCCAAAGAGATACGGAGGCTGTCAACTTTCTTGAGAAG
AAAATGAAGAACAATCCTTCACTACCATTTCAGGAAACCATTCAGATGGCAATATCAGCA
TTGCAGTTCGCCCTGAAGGCTGACCTCAAAGCCTCGGAAGTCGAGGTTGGGGTTGTCAGG
ACGGATGATCCAACTTTCAGAGTGCTGACAGAAGCTGAAATCGATGAGCATCTGGAAGCC
ATCAACCCAGAGCCGCGGCACTCTGAAATGCTCCCCGGTTTATTCCGGGATAAACTGACA
TTGGAGAACTGA

Peptide Sequence

PEP ID

Zm00001d022131_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:7:170934652:170939069:-1 gene:Zm00001d022131 transcript:Zm00001d022131_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type 6

Sequence

MTSVSRLFPITDRLGLLATGIAGEGRALAHEARNQTAEFRFNWGYEMPPDVLAQWIADRA
QIWTQYVSKRPSGVVAMILGIDDEKGTPQLFTCDPAGYFFGHKAASAGQRDTEAVNFLEK
KMKNNPSLPFQETIQMAISALQFALKADLKASEVEVGVVRTDDPTFRVLTEAEIDEHLEA
INPEPRHSEMLPGLFRDKLTLEN

Transcript Sequence

Transcript ID

Zm00001d022131_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:170934652:170939069:-1 gene:Zm00001d022131 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type 6

Sequence

GATCGCCGCATCACCGTATTCTGCTCCGACGGTCGCCTCTACCAAGTCGATTACGCGTGG
AACGCTACGAAGCTGGCGGGCGTCACCTCCGTCGGGGTGCGTGGGACCGACTCCGTATGC
GTCGTCGGCCAGCGGAGGGCGAACACGCACGCGCCCAAGGACAAATTGCTGGACATGACC
AGCGTTTCGCGCCTGTTCCCGATCACCGACCGGCTGGGGTTGCTCGCCACGGGGATCGCA
GGTGAGGGGAGAGCATTGGCACATGAGGCAAGGAATCAAACTGCAGAATTTCGTTTCAAT
TGGGGATATGAAATGCCTCCTGATGTTTTGGCACAATGGATTGCAGACAGAGCACAGATC
TGGACCCAGTATGTTTCCAAGAGACCTTCTGGAGTTGTTGCCATGATTCTGGGCATTGAT
GATGAGAAAGGAACTCCACAACTCTTTACATGTGATCCTGCTGGGTATTTTTTCGGTCAC
AAGGCAGCAAGTGCTGGCCAAAGAGATACGGAGGCTGTCAACTTTCTTGAGAAGAAAATG
AAGAACAATCCTTCACTACCATTTCAGGAAACCATTCAGATGGCAATATCAGCATTGCAG
TTCGCCCTGAAGGCTGACCTCAAAGCCTCGGAAGTCGAGGTTGGGGTTGTCAGGACGGAT
GATCCAACTTTCAGAGTGCTGACAGAAGCTGAAATCGATGAGCATCTGGAAGCCATCAAC
CCAGAGCCGCGGCACTCTGAAATGCTCCCCGGTTTATTCCGGGATAAACTGACATTGGAG
AACTGAAACCATGGCGACCTCAGCTGCATTTTGGGCACCGGAAAGTCAAAGCTTTCATGT
GGTTCT