Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022115_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:7:170667166:170671251:1 gene:Zm00001d022115 gene_biotype:protein_coding transcript_biotype:protein_coding description:signal recognition particle-related / SRP-related
Sequence

ATGACTGAGTTTAAATGGCTTGGTCGCACTTTTCCTATTACAAATGCAAAGACCCGTGTC
TCTATTTTGAAAGCCCAGCAGCTTGAGAGAGACTTGAGTGCTGCAGCCACAGAATCAGTT
GCTGCTGACAAAAAGCTTGCTATATTTGATAAAATATTTTCTGCATACCATGATGCTCGG
AGCTGCATCCGCAATGACCTGGCTTCTGCTGGCAATGCTGAGGATATAAAAGATGACCTG
AATGGTCTTGACAAGGCTGTTAGTGCTGTTCTAGGATTGAGAACTATAGAACGTAACCAG
TTACTTGTTAGCATTGGTAAAAGTAAATTCACAAAGCATCGAGATGAAAAAAATGAGCGA
ACCACAAAGCCAGAAGAACTTGTTCGGCTATATGATCTGCTTATTCAGAATGTAACGGAC
TTGACAGATTTAGTTAGCTCTGGAAGAAACAAAAATGAAGAAGAAAACTCTTTTATTCAT
GAGTATGAGCTGAAAGGCTTGGCTTTCCGAGCTGAGAGATGTTTCTTTTTGGCTAAGTCA
TATAGTTCAGCAGGCAAAAGAGCTGAAGCATATGCATTATTCTGCCATGCCCATACTCTC
ACTGGTTCTGCACTGCAACAGCATTCAAACAGTCATGACAAGGCTTTAATACAAGATCTG
GAGTTTCTATCTAACAACTGTAGATCAAATAGCTGCATAGAACATGCAACAGGCATTATG
GAGGAGGAGATTGTTCCTTTAAAACTTTCTAAAGGAGTCTCAACTATGTCACTTGCTGAT
AATAAAACAAAGGAGAACAAGTATCTCCTTGATATGCTAGAGAGCTATGAATCAGCGATT
GGTGAGCCGAACACCAAAGCTCCATGTCGCATTGCTCAATTCCCACCTCCTTTCCAAGCA
GTTCCATGCAATCCTATTGTGCTTGACATGGCTTACAACTCAGTTGAGTTCCCAAACCTT
GAGAACCGTATGAAAAAAGAAAAGAAGGGTCTTCTGAGCAGGTTCTGGGGTTGA

Peptide Sequence

PEP ID

Zm00001d022115_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:7:170667166:170671251:1 gene:Zm00001d022115 transcript:Zm00001d022115_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:signal recognition particle-related / SRP-related
Sequence

MTEFKWLGRTFPITNAKTRVSILKAQQLERDLSAAATESVAADKKLAIFDKIFSAYHDAR
SCIRNDLASAGNAEDIKDDLNGLDKAVSAVLGLRTIERNQLLVSIGKSKFTKHRDEKNER
TTKPEELVRLYDLLIQNVTDLTDLVSSGRNKNEEENSFIHEYELKGLAFRAERCFFLAKS
YSSAGKRAEAYALFCHAHTLTGSALQQHSNSHDKALIQDLEFLSNNCRSNSCIEHATGIM
EEEIVPLKLSKGVSTMSLADNKTKENKYLLDMLESYESAIGEPNTKAPCRIAQFPPPFQA
VPCNPIVLDMAYNSVEFPNLENRMKKEKKGLLSRFWG

Transcript Sequence

Transcript ID

Zm00001d022115_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:170667166:170671251:1 gene:Zm00001d022115 gene_biotype:protein_coding transcript_biotype:protein_coding description:signal recognition particle-related / SRP-related
Sequence

TTCTGTATAAGTCATACTTGTATATATCATGTTTGTTACAATTTCTTGTTTAGCAAATCA
TCATGTTACCGATGATTTTTTTTCCAATATTGCATGCAACTGCATCTGTATTTTTTTGAT
ATTCAGTTAGCAGATGGGCTAGTGACTGCTACATTCTTGAACTCGTAACACTAGGGTGTA
AAGTGTACAGGTCCAAAGATCACTTTAGTTGTTGTGATGAAGCAATCACAATGCCACTAG
CCCACTATTGGCATGTTGATATTTTGGTCGAACAGATGGCAATCTGGCTGTCTGCAGGAC
AAGACAATTATGGTGCATTTTGAAACGTTACACCTTTTAATGTACACATTTTAGCATGCT
AGATGTGCTAATTGTTTTTGCTGTGGGAAGTTAAAAAAGAAATTTAAAATCCTATGCAAG
GTAGAGCTAGATACTTTTTTTTCTTCAGATTTCTCTATTTTCTCCGGAATATACTACTCA
TCATTTATGCCCATTGTTAAACTGTTTGTATGTGTTTAAGTGTTATTGGCCTAGAGCCCA
GCCCATGTAACCCACAAGAGTTGTGTATATGTAATACTGCAGCCCACTATCAATGAATTA
GGGTTTTCACTCTCTAACAGCCATATAGTGCAGTTGGCAAATGAAACAAGCTAAATGTTA
TACATAGCACCACATTTGTCCTGCCATCTGATTTCATGATTGGCGCACCATTGCTATGAC
TTCATTTTCTGGAACTATGACTAGTTTTTAATATAGTTTCATAAAATTGGCACCAACTTG
TTTACTTGTAATTTTTTTTTGGCTGTTTAGATGCTCTTTTAGTATTCTTATACGTATCTT
GAAAATTTTTCAGGCTGTATTGTCTGAGACAAGATCACAGCAGGCAGCTTCCATGACTGA
GTTTAAATGGCTTGGTCGCACTTTTCCTATTACAAATGCAAAGACCCGTGTCTCTATTTT
GAAAGCCCAGCAGCTTGAGAGAGACTTGAGTGCTGCAGCCACAGAATCAGTTGCTGCTGA
CAAAAAGCTTGCTATATTTGATAAAATATTTTCTGCATACCATGATGCTCGGAGCTGCAT
CCGCAATGACCTGGCTTCTGCTGGCAATGCTGAGGATATAAAAGATGACCTGAATGGTCT
TGACAAGGCTGTTAGTGCTGTTCTAGGATTGAGAACTATAGAACGTAACCAGTTACTTGT
TAGCATTGGTAAAAGTAAATTCACAAAGCATCGAGATGAAAAAAATGAGCGAACCACAAA
GCCAGAAGAACTTGTTCGGCTATATGATCTGCTTATTCAGAATGTAACGGACTTGACAGA
TTTAGTTAGCTCTGGAAGAAACAAAAATGAAGAAGAAAACTCTTTTATTCATGAGTATGA
GCTGAAAGGCTTGGCTTTCCGAGCTGAGAGATGTTTCTTTTTGGCTAAGTCATATAGTTC
AGCAGGCAAAAGAGCTGAAGCATATGCATTATTCTGCCATGCCCATACTCTCACTGGTTC
TGCACTGCAACAGCATTCAAACAGTCATGACAAGGCTTTAATACAAGATCTGGAGTTTCT
ATCTAACAACTGTAGATCAAATAGCTGCATAGAACATGCAACAGGCATTATGGAGGAGGA
GATTGTTCCTTTAAAACTTTCTAAAGGAGTCTCAACTATGTCACTTGCTGATAATAAAAC
AAAGGAGAACAAGTATCTCCTTGATATGCTAGAGAGCTATGAATCAGCGATTGGTGAGCC
GAACACCAAAGCTCCATGTCGCATTGCTCAATTCCCACCTCCTTTCCAAGCAGTTCCATG
CAATCCTATTGTGCTTGACATGGCTTACAACTCAGTTGAGTTCCCAAACCTTGAGAACCG
TATGAAAAAAGAAAAGAAGGGTCTTCTGAGCAGGTTCTGGGGTTGAAAGATGGCATATGC
CTAGGATTTTGGTACATTGTCCCATCATTTGATATGCTTTGTGCATGAACGGTGTAAAAC
TAGAATGTCCTGATAATACCTCTCTGATGGGTGAAAGATCTTCAGTATTCCGCCCAAGGA
TTTTTGAGATTCTTTATCAGAAGGTTAATTTAGCCGTTGCAAAGTACATCTAGCTCGGTG
ACTGATCAGCATAACCTTTTGCTGTTACTAAATTTTGAGCAATGACTGATTTCTTGGATT
ATCG