Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022071_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:169428759:169434059:-1 gene:Zm00001d022071 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Sequence

ATGGCCTTGGAAGATGGGAGCCCAGCTACTTTTACTCCACAAGTGATTGCTAATGCATTT
GTCAAACAATACTATCAAACTCTTCGATATGCCAGAGAGGATGCCTATAAATTCTATAAT
GACAAAAGTATTCTTGGTCGAACAGATTCTAATGGGAAAATGATTTGTGTAACCACAATT
GATGATATCAAGGAGCAACTTGTGTCTACAGATTGTGCTGACTGTTTGATAGAGATCGAG
ACTGTTGATGCACAGCCATCCCATGTGGATGGTGTGATCATTTTGGTTGCTGGATATTTT
ACAACGGCTGTTGTGAAACAGAAGTTTATACAATCATTTTTTCTCGCTCCACAGGAAAAT
AGTGGCTATTATGTTTTGAATGATACATTCAGACTTACTGGGATTTCATTCGAGGTGAAG
GTAGTTGCAGCTAACCATGATAACAAAAGCACACAAATTACCACCCTGCCCAATGAGCCA
GAAATAGATTCATTTAAGGAGAGTGAAGTGCCAGGTGTACCACCTGCAGGAAACATTCTC
GTCAATGATGGAGTTATCAGCACCTCTGCAAATGTTGTTTCTCCAGTTAAGAATGACCCT
GTTGTTGAGACATGTGTGAAAGTGGTTAACGAGGATGTTGTGAAGATACCTGTAGCCGCT
CCAGCTTCAACTCCTGTTACAGCTGAGGAAGTTGTTAACAAGGATTTTGTGAAGATTCCT
GAGTCTGCTCCGGCTCTCCCTTCATCAGTTGAGAAGGCTGCTCCAGCACCTCCCGCATCA
GTTGAGAAGGCTGCTGCAGCACCTCCCGCATCAGTTGAGAAAGGTGCTCCAGCTCCTCGC
ACACCAGTTGAGAAGGCTGATCCAGCTCCTAGTGCACCTGTTGAGAAAGGTGCTCCAGCT
CTTCGCGCACCAGTTGAGAAGGCTGATCCAGCTCCTCGTGCACCAGTTGAGAAGGAAGTA
ACTAGGAAGACTTATGCATCAGTTGTTAAAATCCCGAGGGAGGACACACAGCCTGCCCCA
GCTGCCAGACCCTCCAAGCCCAACCTAAATATAAAGATGGTTCAAAATACGGAGAAAAAT
GTGTCCTCACCATCGAAACCTGCTCATGCTACTGTTAATGCCCTACCGGGCGATAAGGGT
GTTCCTAAAAACAAATCACCTGATGAGCCAGGGTACTCAATTTTTGTTAAGAATTTACCT
TTTGAAGCAACTGTTGAAATGGTCGAACAAGAGTTCAGCAAGTTTGGTGCTATTAAATCT
GGTGGTGTACAAGTCAAATGCCAGCCTGATCAGTTTTGCTTTGGCTTTGTCGAATTTGAG
TCTCAGCAATCCATGCTAGCAGCAATCGAGGCTTCTAGGGTTTATTTCGGCACAAGAGAA
TCATATGTTGAGGAGAAAAGAACTAAAACACGAGTTGTTGATGGTGTTATCACCCGTGGG
GATGACAATGGCAACGGCGGTGGCGGTCGGTTCCATTCTGGCAGAGGTGGTGGTTACTAT
GGGGACGGCTACAAGCGGCAGTGGGGCGGTCAGAACAACGGCTACTACAACGGCGCGGAT
AACATGAGGAACGACTACTCAGGTCGTGTCCGTGGACCGCAAGGGAACGGCCACCCTCAG
AACGGCCACGGCTACCATCAGAACGGCCACGGCTACTACTCTGGGAATGGCTACCAACAG
CGACGCCCCAACAGCAATGGGAACGGACTGAGGGTCGAGCGCAACAATGGCTTCAGGCAG
CAAGGCCCTGCATCTGCCTAG

Peptide Sequence

PEP ID

Zm00001d022071_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:169428759:169434059:-1 gene:Zm00001d022071 transcript:Zm00001d022071_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Sequence

MALEDGSPATFTPQVIANAFVKQYYQTLRYAREDAYKFYNDKSILGRTDSNGKMICVTTI
DDIKEQLVSTDCADCLIEIETVDAQPSHVDGVIILVAGYFTTAVVKQKFIQSFFLAPQEN
SGYYVLNDTFRLTGISFEVKVVAANHDNKSTQITTLPNEPEIDSFKESEVPGVPPAGNIL
VNDGVISTSANVVSPVKNDPVVETCVKVVNEDVVKIPVAAPASTPVTAEEVVNKDFVKIP
ESAPALPSSVEKAAPAPPASVEKAAAAPPASVEKGAPAPRTPVEKADPAPSAPVEKGAPA
LRAPVEKADPAPRAPVEKEVTRKTYASVVKIPREDTQPAPAARPSKPNLNIKMVQNTEKN
VSSPSKPAHATVNALPGDKGVPKNKSPDEPGYSIFVKNLPFEATVEMVEQEFSKFGAIKS
GGVQVKCQPDQFCFGFVEFESQQSMLAAIEASRVYFGTRESYVEEKRTKTRVVDGVITRG
DDNGNGGGGRFHSGRGGGYYGDGYKRQWGGQNNGYYNGADNMRNDYSGRVRGPQGNGHPQ
NGHGYHQNGHGYYSGNGYQQRRPNSNGNGLRVERNNGFRQQGPASA

Transcript Sequence

Transcript ID

Zm00001d022071_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:169428759:169434059:-1 gene:Zm00001d022071 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Sequence

AACCCTCTTGGCTCTTTTCCATCTCGCTATAAACCCTTCACGCCCCGGCGTCCGCGGCTC
GCTCCTGTTCGCGCCGCCGACTCGCCTCGCGTCGCCTCACTAGGGTTTGCAGTTCCCGTC
GCGGGCGAAGGCGGCGTCGTCTCGTGGCGGCGCCGTCTCCGTGTGCCTTCCCGCTCCCAA
GCAATGGCCTTGGAAGATGGGAGCCCAGCTACTTTTACTCCACAAGTGATTGCTAATGCA
TTTGTCAAACAATACTATCAAACTCTTCGATATGCCAGAGAGGATGCCTATAAATTCTAT
AATGACAAAAGTATTCTTGGTCGAACAGATTCTAATGGGAAAATGATTTGTGTAACCACA
ATTGATGATATCAAGGAGCAACTTGTGTCTACAGATTGTGCTGACTGTTTGATAGAGATC
GAGACTGTTGATGCACAGCCATCCCATGTGGATGGTGTGATCATTTTGGTTGCTGGATAT
TTTACAACGGCTGTTGTGAAACAGAAGTTTATACAATCATTTTTTCTCGCTCCACAGGAA
AATAGTGGCTATTATGTTTTGAATGATACATTCAGACTTACTGGGATTTCATTCGAGGTG
AAGGTAGTTGCAGCTAACCATGATAACAAAAGCACACAAATTACCACCCTGCCCAATGAG
CCAGAAATAGATTCATTTAAGGAGAGTGAAGTGCCAGGTGTACCACCTGCAGGAAACATT
CTCGTCAATGATGGAGTTATCAGCACCTCTGCAAATGTTGTTTCTCCAGTTAAGAATGAC
CCTGTTGTTGAGACATGTGTGAAAGTGGTTAACGAGGATGTTGTGAAGATACCTGTAGCC
GCTCCAGCTTCAACTCCTGTTACAGCTGAGGAAGTTGTTAACAAGGATTTTGTGAAGATT
CCTGAGTCTGCTCCGGCTCTCCCTTCATCAGTTGAGAAGGCTGCTCCAGCACCTCCCGCA
TCAGTTGAGAAGGCTGCTGCAGCACCTCCCGCATCAGTTGAGAAAGGTGCTCCAGCTCCT
CGCACACCAGTTGAGAAGGCTGATCCAGCTCCTAGTGCACCTGTTGAGAAAGGTGCTCCA
GCTCTTCGCGCACCAGTTGAGAAGGCTGATCCAGCTCCTCGTGCACCAGTTGAGAAGGAA
GTAACTAGGAAGACTTATGCATCAGTTGTTAAAATCCCGAGGGAGGACACACAGCCTGCC
CCAGCTGCCAGACCCTCCAAGCCCAACCTAAATATAAAGATGGTTCAAAATACGGAGAAA
AATGTGTCCTCACCATCGAAACCTGCTCATGCTACTGTTAATGCCCTACCGGGCGATAAG
GGTGTTCCTAAAAACAAATCACCTGATGAGCCAGGGTACTCAATTTTTGTTAAGAATTTA
CCTTTTGAAGCAACTGTTGAAATGGTCGAACAAGAGTTCAGCAAGTTTGGTGCTATTAAA
TCTGGTGGTGTACAAGTCAAATGCCAGCCTGATCAGTTTTGCTTTGGCTTTGTCGAATTT
GAGTCTCAGCAATCCATGCTAGCAGCAATCGAGGCTTCTAGGGTTTATTTCGGCACAAGA
GAATCATATGTTGAGGAGAAAAGAACTAAAACACGAGTTGTTGATGGTGTTATCACCCGT
GGGGATGACAATGGCAACGGCGGTGGCGGTCGGTTCCATTCTGGCAGAGGTGGTGGTTAC
TATGGGGACGGCTACAAGCGGCAGTGGGGCGGTCAGAACAACGGCTACTACAACGGCGCG
GATAACATGAGGAACGACTACTCAGGTCGTGTCCGTGGACCGCAAGGGAACGGCCACCCT
CAGAACGGCCACGGCTACCATCAGAACGGCCACGGCTACTACTCTGGGAATGGCTACCAA
CAGCGACGCCCCAACAGCAATGGGAACGGACTGAGGGTCGAGCGCAACAATGGCTTCAGG
CAGCAAGGCCCTGCATCTGCCTAGACCTTGTCATTTTTGCAGTCCATCCTTGATACGAAA
GCAGTGGGGATATTTTGATGTCTATAGGTAGATACTTTGTCATGGCTGAATTTTGTTGTC
GCGGTTGATAAGAGCAATCGTGCGTCCTTTGACTGGAACTGTAATGAGGAGTGGAGTCAG
TCGTGTCGCAAAGGGGAAAAAAACATCTATCGAAATCCCTGCTACTCTTTTGTCGTGCTG
TCCTCTTCAAGCTGTCTGCGTGTACATCGGTTTTTCTGCTTAGCAATTGGACTGGGCGGA
GACAAGCTTCTCTCCAATTCTCACAGCTTTTGCCGT