Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d022067_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:169289768:169291428:-1 gene:Zm00001d022067 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycerophosphodiester phosphodiesterase GDPD5
Sequence

ATGGCGTCCCTCCGTGTGGTGTCGGTGCTAGTGTTGGTGGCAATGGCGGCGAGCGCGGGC
GGCGTCGCGGCGCGGCCTCTGGTCGGGGGAGGCGGGGCGTGGGAGAACAGGGCGCCGCTG
CAGACGTCGCGCCCCTTCAACATCGCGCACCGGGGCTCCAACGGGGAGCTCCCCGAGGAG
ACGGCGGCGGCCTACGCGCGCGCCATCGACGAGGGCGCGGACTTCATCGAGGCGGACATC
GAGGCCACCAAGGACGGCCACCTCGTCTGCTTCCACGACACCACGCTCGACGGCACCACC
GACGTCGCCGACCACCCGGAGTTCGCCGGCCGCCGGCGCACCCTCGAGGTGCAGTGGGCC
AACGTCACCGGATACTTCGTCACTGATTTCACGCTGGTGGAGCTCAAGACGCTGCGGGCG
AAGCAGCGATGGGACTTCCGTGACAAGTCCCACAACGGCGTCTCGCCGATCATCACGTTC
GACGAGTTCATCGACGTCGCGCTGAACGCCAAGAGGGTGGTCGGGATCTACCCGGAGATG
AAGAACCCTGTGTTCATGAACAAGCACGTGCAGTGGGCTGACGGGAAGAAGTACGAGGAC
AAGTTCATCGCGACGCTGAAGAAGTACGGCTACGGCGGCAAGTACATGTCGCCGGCGTGG
CGCGCCAGGCCGGTCTTCGTCCAGTCTTTCGCGCCGACGTCGCTGGTCCGCGCGGCCGGC
CTCACGGACTCGCCGCTCGTCTTCCTCGTCGACGACGTGACCGTGCGGACCGAGGACACC
AACCAGCCGTACGACGAGATCACCTCAGGCGAGCACCTGGACTACATGAAGAGGTACGTG
GTGGGCATCGGGCCCTGGAAGGACACGGTGGTGCCGCCGACCAAGGACAACCGGCTGGCC
ACGCCGTCGGACCTCGTCGCAATGGCGCACGCGAGGGGGCTGCAGGTGCACCCCTACACG
TACCGCAACGAGAACAAGTTCCTGCACTTCGACTTCCGGCAGGACCCCTACGCCGAGTAC
GACTACTGGATCAACGATGTCGGCATCGATGGCCTCTTCACCGACTTCCCGGCGAGCCTC
CGCCGGTTCCAGGAGTGGACCGCCAAGAACAAAGACTGA

Peptide Sequence

PEP ID

Zm00001d022067_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:169289768:169291428:-1 gene:Zm00001d022067 transcript:Zm00001d022067_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycerophosphodiester phosphodiesterase GDPD5
Sequence

MASLRVVSVLVLVAMAASAGGVAARPLVGGGGAWENRAPLQTSRPFNIAHRGSNGELPEE
TAAAYARAIDEGADFIEADIEATKDGHLVCFHDTTLDGTTDVADHPEFAGRRRTLEVQWA
NVTGYFVTDFTLVELKTLRAKQRWDFRDKSHNGVSPIITFDEFIDVALNAKRVVGIYPEM
KNPVFMNKHVQWADGKKYEDKFIATLKKYGYGGKYMSPAWRARPVFVQSFAPTSLVRAAG
LTDSPLVFLVDDVTVRTEDTNQPYDEITSGEHLDYMKRYVVGIGPWKDTVVPPTKDNRLA
TPSDLVAMAHARGLQVHPYTYRNENKFLHFDFRQDPYAEYDYWINDVGIDGLFTDFPASL
RRFQEWTAKNKD

Transcript Sequence

Transcript ID

Zm00001d022067_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:169289768:169291428:-1 gene:Zm00001d022067 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycerophosphodiester phosphodiesterase GDPD5
Sequence

GTCAGCCACTCCTAACAGTCTCCTCATATAGCGGCAGTCCAGTCCACCTCCTCCGAATCC
GGCGGTCGCCGCCGGCCATCGCCGCGGCGGATATGGCGTCCCTCCGTGTGGTGTCGGTGC
TAGTGTTGGTGGCAATGGCGGCGAGCGCGGGCGGCGTCGCGGCGCGGCCTCTGGTCGGGG
GAGGCGGGGCGTGGGAGAACAGGGCGCCGCTGCAGACGTCGCGCCCCTTCAACATCGCGC
ACCGGGGCTCCAACGGGGAGCTCCCCGAGGAGACGGCGGCGGCCTACGCGCGCGCCATCG
ACGAGGGCGCGGACTTCATCGAGGCGGACATCGAGGCCACCAAGGACGGCCACCTCGTCT
GCTTCCACGACACCACGCTCGACGGCACCACCGACGTCGCCGACCACCCGGAGTTCGCCG
GCCGCCGGCGCACCCTCGAGGTGCAGTGGGCCAACGTCACCGGATACTTCGTCACTGATT
TCACGCTGGTGGAGCTCAAGACGCTGCGGGCGAAGCAGCGATGGGACTTCCGTGACAAGT
CCCACAACGGCGTCTCGCCGATCATCACGTTCGACGAGTTCATCGACGTCGCGCTGAACG
CCAAGAGGGTGGTCGGGATCTACCCGGAGATGAAGAACCCTGTGTTCATGAACAAGCACG
TGCAGTGGGCTGACGGGAAGAAGTACGAGGACAAGTTCATCGCGACGCTGAAGAAGTACG
GCTACGGCGGCAAGTACATGTCGCCGGCGTGGCGCGCCAGGCCGGTCTTCGTCCAGTCTT
TCGCGCCGACGTCGCTGGTCCGCGCGGCCGGCCTCACGGACTCGCCGCTCGTCTTCCTCG
TCGACGACGTGACCGTGCGGACCGAGGACACCAACCAGCCGTACGACGAGATCACCTCAG
GCGAGCACCTGGACTACATGAAGAGGTACGTGGTGGGCATCGGGCCCTGGAAGGACACGG
TGGTGCCGCCGACCAAGGACAACCGGCTGGCCACGCCGTCGGACCTCGTCGCAATGGCGC
ACGCGAGGGGGCTGCAGGTGCACCCCTACACGTACCGCAACGAGAACAAGTTCCTGCACT
TCGACTTCCGGCAGGACCCCTACGCCGAGTACGACTACTGGATCAACGATGTCGGCATCG
ATGGCCTCTTCACCGACTTCCCGGCGAGCCTCCGCCGGTTCCAGGAGTGGACCGCCAAGA
ACAAAGACTGATTGTGAGGTTACTGTCTTGGTAGCGGGCTTCTTTGATTCAGTCATTCAG
ATCGTAGCTCTGGAGATGTTTTCAGAGTGTAGAGACAATTCTTTGGTGTTCCTTGTTTTA
AATAGCCATATATTTTCTTGATTGGATCAGTAACACAGTTCTTACCGGTTGTTCATCATA
ACAGACCAGTAATGTGATCTCATCTTCACA