Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022052_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:169064294:169065853:-1 gene:Zm00001d022052 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGCCTCCCCGTCCCCGCCACCGCCTCCTTTTTTTTTGCTGTCACCTCTCCACCACGCCG TCTCCCGCGCCGGCCCCCGTGCCTAAGCCCACCGATCCGGCGCTGATGCTCCGCCTATGC ACGATCCTATACCAGCAGCAACACGACCCCGACGACGCGCTGCGCCGCCGCCTCTCCGCG TTGCCGCTGCCCACCGCGCCCGCCGACATTCGCGAGCTCTTCCTCCAGGCCTCCTCGCGG TTCCCGCTCTCCTGGCGCCCCGTGCACCGCCTCCTCTCGCACCTTTCCACCCTCCACCGC GGCGCCGGCGCCGGCGACGGCGACGGCGACAGCGACAGCGACAGCGGAGGCGGTGGGTTC CCACACTCCCCAGCCACTGCCGCCCGCCTCCTAGACGTCTTAGCCAAGTCCGGGAACATC GACCTCCTCCACTCCACGCTCTTCTCACTGCCCCGCAGCCTCCTCTCCGCCGCGGCACTC CGCGCCGCCGTGCGAGGGCTCGCTCCCGCCCGCGAGGTCGGGAAGGTAGCCGCGCTCGTG ACGCTCTTCCCCGAGTGCCACCGCGCTCGGGTCCTCACGTTCGTCACCGACGTCGCGTGC TCGGAGCCGTGCAGGCTCCCTGACGTCGCGGAAAAGGCGATCAAGCGCGCCGAGCACCGG CACGGCGTCGCGCGCACGGGCAGGTGCTGCGACCTGCTGGTCGTTGCGTACTGCCGTGCG GGGTCTCTTGCGGACGCATGCAGGGTGTGGAATGGCATGGAGAGGCGCGGCCTCGAGCCG GGTGCCGCGGCGTACCAGGAGATCGTGGTAACCATGTTCAAGAATAACCGCGTAGCCGAC GCCATGAAGTTGTTCGACGGAATGCGGAGGAGCGGAGTGCGGGACAACGGAGGCGGGTGC TGCCGCGCGGTGGTGTCATGGCTGTGCAAGGAAGGGAGGGTATGGGGCGCGTACATGGTG TTGGCAGAAATGGTAAAACGAGGTCTGGAAGTGGATGGTGAGGTGCTGGGAGATTTGGTG TATGGGCTGATGTCGAGGAGAAGGGTGAGGGAAGCATACAGGGTGTTCCATGGCGTTAAG GAGAAGGAGATTGCTCTCTATCATGGATTGATGAAGGGGTTGCTGAGGATCAAACGAGCA GGGGAGGCCACTGAGGTGTTCAGGGAGATGATCACCAGGGGATGTGAACCGAACATGCAC ACTTACATCATGTTGCTTCAGGGGCACCTTGGGAAGAGGGGTCGGAAGGGGAGGGATCCA TTGGTGAATTTTGAGAGCATATTTGTTGGTGGCTTGGTGAAAGCCGGGAGGACATTGGAG GCGACCAAGTTTGTAGAGAGGACAATGTGGGGTGGGGTAGATGTGCCGAGATTTGACTAT AACAAGTTTCTGTACTATTTCTCGAATGATGAGGGAGCCGTAATGTTTGAAGAGGTCAGC AAGAGATTAAAGGAAGTTGGAGTAATTGATCTTGCAGACATTTTGTCAGCCTATGGTGAG CGCATGACCACCAGGGATAGGAGAAGGATAGCAATGAATGGACTTCTCAAATCGGTTTAG

Peptide Sequence

PEP ID	Zm00001d022052_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:169064294:169065853:-1 gene:Zm00001d022052 transcript:Zm00001d022052_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MPPRPRHRLLFFCCHLSTTPSPAPAPVPKPTDPALMLRLCTILYQQQHDPDDALRRRLSA LPLPTAPADIRELFLQASSRFPLSWRPVHRLLSHLSTLHRGAGAGDGDGDSDSDSGGGGF PHSPATAARLLDVLAKSGNIDLLHSTLFSLPRSLLSAAALRAAVRGLAPAREVGKVAALV TLFPECHRARVLTFVTDVACSEPCRLPDVAEKAIKRAEHRHGVARTGRCCDLLVVAYCRA GSLADACRVWNGMERRGLEPGAAAYQEIVVTMFKNNRVADAMKLFDGMRRSGVRDNGGGC CRAVVSWLCKEGRVWGAYMVLAEMVKRGLEVDGEVLGDLVYGLMSRRRVREAYRVFHGVK EKEIALYHGLMKGLLRIKRAGEATEVFREMITRGCEPNMHTYIMLLQGHLGKRGRKGRDP LVNFESIFVGGLVKAGRTLEATKFVERTMWGGVDVPRFDYNKFLYYFSNDEGAVMFEEVS KRLKEVGVIDLADILSAYGERMTTRDRRRIAMNGLLKSV

Transcript Sequence

Transcript ID	Zm00001d022052_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:169064294:169065853:-1 gene:Zm00001d022052 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGCCTCCCCGTCCCCGCCACCGCCTCCTTTTTTTTTGCTGTCACCTCTCCACCACGCCG TCTCCCGCGCCGGCCCCCGTGCCTAAGCCCACCGATCCGGCGCTGATGCTCCGCCTATGC ACGATCCTATACCAGCAGCAACACGACCCCGACGACGCGCTGCGCCGCCGCCTCTCCGCG TTGCCGCTGCCCACCGCGCCCGCCGACATTCGCGAGCTCTTCCTCCAGGCCTCCTCGCGG TTCCCGCTCTCCTGGCGCCCCGTGCACCGCCTCCTCTCGCACCTTTCCACCCTCCACCGC GGCGCCGGCGCCGGCGACGGCGACGGCGACAGCGACAGCGACAGCGGAGGCGGTGGGTTC CCACACTCCCCAGCCACTGCCGCCCGCCTCCTAGACGTCTTAGCCAAGTCCGGGAACATC GACCTCCTCCACTCCACGCTCTTCTCACTGCCCCGCAGCCTCCTCTCCGCCGCGGCACTC CGCGCCGCCGTGCGAGGGCTCGCTCCCGCCCGCGAGGTCGGGAAGGTAGCCGCGCTCGTG ACGCTCTTCCCCGAGTGCCACCGCGCTCGGGTCCTCACGTTCGTCACCGACGTCGCGTGC TCGGAGCCGTGCAGGCTCCCTGACGTCGCGGAAAAGGCGATCAAGCGCGCCGAGCACCGG CACGGCGTCGCGCGCACGGGCAGGTGCTGCGACCTGCTGGTCGTTGCGTACTGCCGTGCG GGGTCTCTTGCGGACGCATGCAGGGTGTGGAATGGCATGGAGAGGCGCGGCCTCGAGCCG GGTGCCGCGGCGTACCAGGAGATCGTGGTAACCATGTTCAAGAATAACCGCGTAGCCGAC GCCATGAAGTTGTTCGACGGAATGCGGAGGAGCGGAGTGCGGGACAACGGAGGCGGGTGC TGCCGCGCGGTGGTGTCATGGCTGTGCAAGGAAGGGAGGGTATGGGGCGCGTACATGGTG TTGGCAGAAATGGTAAAACGAGGTCTGGAAGTGGATGGTGAGGTGCTGGGAGATTTGGTG TATGGGCTGATGTCGAGGAGAAGGGTGAGGGAAGCATACAGGGTGTTCCATGGCGTTAAG GAGAAGGAGATTGCTCTCTATCATGGATTGATGAAGGGGTTGCTGAGGATCAAACGAGCA GGGGAGGCCACTGAGGTGTTCAGGGAGATGATCACCAGGGGATGTGAACCGAACATGCAC ACTTACATCATGTTGCTTCAGGGGCACCTTGGGAAGAGGGGTCGGAAGGGGAGGGATCCA TTGGTGAATTTTGAGAGCATATTTGTTGGTGGCTTGGTGAAAGCCGGGAGGACATTGGAG GCGACCAAGTTTGTAGAGAGGACAATGTGGGGTGGGGTAGATGTGCCGAGATTTGACTAT AACAAGTTTCTGTACTATTTCTCGAATGATGAGGGAGCCGTAATGTTTGAAGAGGTCAGC AAGAGATTAAAGGAAGTTGGAGTAATTGATCTTGCAGACATTTTGTCAGCCTATGGTGAG CGCATGACCACCAGGGATAGGAGAAGGATAGCAATGAATGGACTTCTCAAATCGGTTTAG