Plant GARDEN How To ▶︎

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Zea mays

CDS Sequence

CDS ID

Zm00001d022046_T020

CDS Infomation

cds chromosome:B73_RefGen_v4:7:168698393:168724503:1 gene:Zm00001d022046 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein

Sequence

ATGTTTGGGCTTCGAAGGCGTGGACGTTGCCTAATTGCAGATGAGATGGGGCTCGGCAAG
ACTCTCCAGGCGATTGCAATAGCATGCTGTTTCAAGGACGAGGGCTCTATATTAATAGTA
TGTCCAGCTGTATTGCGTTATTCTTGGGCAGAGGAATTGGAACGCTGGGATCCTTCATTT
ATGCCAAAAGATATTCATATTGTATTTGGTCGTCAAGACAGTCTTGAACATCTAAATGCT
ACTCCAAGGGCAGTGATTATATCTTACCAGATGCTAAGTCGCCTTAGAGAAAGTATGGTG
AATAGAACATGGGCACTGATGATTGTTGATGAATCACATAACATACGCTGCACGAAGAAA
CTAGAAGAAAAATATGAGACAAAAGCTGTGCTACATCTAGCTTCAAAAACTGAACGCATC
ATATTGCTCTCGGGGACACCCTCTTTCTCAAGACCTTTTGATATCTACCACCAGATAAAT
ATGCTATGGCCCCACATGCTTGGTACTGATAAATTTGATTATGCGAAAAAATATTGCTTG
CTGCATGTTGCACGAAGTTATCAGGGGAAAATGTTTAAGGACTTCTCTAAGGGCACACGG
TTGACAGAGTTAAATGTTTTGCTCAGTCAAACTGTCATGATTAGGCGACTGAAGGAGCAT
TTGTTGAATGAACTGCCCCCCAAGCGGCGACAAATTATTAGGTTGAAGCTAAAGGCACCA
GATATCAGGGCAGCCACATCTTCATGCGGCAAAAGGGTGAACCCTAACAGTTGTAATGGA
ACTCTTACAATTGAATTGCCCAGTAAAAGCAATGATGATGAAAATACAAAAGAGGAAGAA
GATGATTGCAAGAAATCTCCAAGGAGTCTCACCCCACAAGAGATTGGTATCGCAAAGTTA
TCTGGATTTAGTGAATGGTTCTCAAATCATTTCATCATGAATGGATTTGATGCTAACCAT
AACCTGGATCCCCAGTCTAGCTGTCAGAAAACAATAATATTTGCACATCACTTAAAGGTT
CTAGATGGAATACAGGTGTTTATCTCTGAGAATGAGATCAGATTTGTTCGCATTGATGGA
AGCACACTTCAAAGGGAAAGGAAAGAAGCTGTTGATTCTTTCCGTTTGGATCCAGAGGTG
AAGGTTGCAATAATTGGAATTACTGCTGGTGGTGTTGGCTTAGACTTCTCATCTGCTCAG
AATGTTATTTTTGTGGAGCTCCCAAAATCAGCTTCAGAATTGCTTCAGGCTGAGGATAGA
GCTCATAGACGTGGCCAAAGAAATGCGGTCAACATATATATATTCTGTGGAAAGAACACA
TTGGATGAATCACACTGGCTCCAGTTAAACCAGAGTCTGTTCCGTGTCTCGTCTTTGATG
AATGGAAAAAAGGATGCTGTAAGGGAGATTGAGGTTGATCAAGTGTGCCAACTTGAAGAA
ATCAAGGACACCGAGGAAACACAACGCAAACTGCATCCTTTGGAGAATCATAATGCAGAT
TTGACCCACGTACCAAAAAAACTTCTGGAAAGTGATGATTTGTCCATTGATGGTTTTCTT
GGCATCGAAGATTTGGAATTTGACTTGGATTTCACCATTAGGACAATTCCTCTTGAATTT
GAGGATGAAAACCCCGGCACATCCTTGAAAAATAATCCAACTCCAACAGTACTTGAAGAC
AGATCTTGTATTGATGTTTCTCTTTCACCAGCTGCAGTCTTTTGCTCTGTACTATCTAGT
TGTAAATCAATAAAGTCTCGTAAGAGGCTTTCTGGAAATTCTGGGTCCTTGAGTCAAGCT
GCATCTGTTCCAGATTTTCCAATTCAAGTGGAGTCTCTGCGTTTTGAGGTTAGCCGGCAC
ACAGGACGAATCCACTTGTACAGTTGTGTTCCTGGACATGATTCAAGACCCAAACCACTT
TGTGAAAATTTTCTGCCAGAAGAATTGAATTCACCTTTATGTTCTCCCAGTGATGTTAAA
ACAAGAACTCTTCTCTTGAAAAAGATTCCTTCATTTTGCAATGTGTTCAATGCATTCATC
AAAGAGTGGTTGGCACTAAGACCAATTGATCAAAATAAATTGCTTGGAAAGCCATTACAA
CTTCCGTTGAACCTTGAGTTGTGTTTTCTGAAAGATAGCATCAATCATAGCACAGAAGGG
ATACTTAAAGGGGGAAGTAAGAGGCGTGCTGCATCATTGAATGATGTCAGTAATCCTTTG
CCAGAAAATGCTGAATGGAGACAGGTGGTGTTGCGTAATGGCACCTGTAAAGAGAGACAG
TACACTCAGGGCTGGACCATTGATGATGAACCTCTCTGCAAACTTTGTCAAGGACTTTGC
AATGGAAGGCTTGCAAAGTCACCAGAATATTTTGAAGATCTATTCTGTAGTTTAGCTTGT
TTCCAGGAATACAGATTAAGAACCAGTGGCAGGGCCCTCCGGCAGGCACTGTTTCAAATA
GAACGTGGCAAGTGCTCCCAATGCAAGCTCGATTGTTGCAAGCTTGTCAAACACATTAAA
CTCTTACCTTTGGGAAAGCGAGAAGAATACATCAGAAAGGTTGCTCCAAACATTGCAAGT
AGAAAGAAACTCCTAGATAAACTTGTCCGTGAACCAATTGATGGAAATGCTTGGCATGCA
GATCACATAATACCTGTTTATAAAGGAGGAGGGGAATGTAAACTCGAGAACATGAGAACA
CTGTGTGTGGCTTGTCATTATGAGGTCACCAGAACTCAGCACAAGGAACTAAAAGAAATA
AGAAAGAAGGCTAAAGAGCACTTGAAAAACGCCTTGAATAAACAAAAGGATAAACCAAGT
GAAGCAACAGAAGAACTAGATGACGAATCGTTGCTGATAGCTGTCCCGGGTAGTGCCTAC
TCCTTAGGATTTCCTGGCAACGGATCTGATGAAAAGGCTGCTGAATAG

Peptide Sequence

PEP ID

Zm00001d022046_P020

PEP Infomation

pep chromosome:B73_RefGen_v4:7:168698393:168724503:1 gene:Zm00001d022046 transcript:Zm00001d022046_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein

Sequence

MFGLRRRGRCLIADEMGLGKTLQAIAIACCFKDEGSILIVCPAVLRYSWAEELERWDPSF
MPKDIHIVFGRQDSLEHLNATPRAVIISYQMLSRLRESMVNRTWALMIVDESHNIRCTKK
LEEKYETKAVLHLASKTERIILLSGTPSFSRPFDIYHQINMLWPHMLGTDKFDYAKKYCL
LHVARSYQGKMFKDFSKGTRLTELNVLLSQTVMIRRLKEHLLNELPPKRRQIIRLKLKAP
DIRAATSSCGKRVNPNSCNGTLTIELPSKSNDDENTKEEEDDCKKSPRSLTPQEIGIAKL
SGFSEWFSNHFIMNGFDANHNLDPQSSCQKTIIFAHHLKVLDGIQVFISENEIRFVRIDG
STLQRERKEAVDSFRLDPEVKVAIIGITAGGVGLDFSSAQNVIFVELPKSASELLQAEDR
AHRRGQRNAVNIYIFCGKNTLDESHWLQLNQSLFRVSSLMNGKKDAVREIEVDQVCQLEE
IKDTEETQRKLHPLENHNADLTHVPKKLLESDDLSIDGFLGIEDLEFDLDFTIRTIPLEF
EDENPGTSLKNNPTPTVLEDRSCIDVSLSPAAVFCSVLSSCKSIKSRKRLSGNSGSLSQA
ASVPDFPIQVESLRFEVSRHTGRIHLYSCVPGHDSRPKPLCENFLPEELNSPLCSPSDVK
TRTLLLKKIPSFCNVFNAFIKEWLALRPIDQNKLLGKPLQLPLNLELCFLKDSINHSTEG
ILKGGSKRRAASLNDVSNPLPENAEWRQVVLRNGTCKERQYTQGWTIDDEPLCKLCQGLC
NGRLAKSPEYFEDLFCSLACFQEYRLRTSGRALRQALFQIERGKCSQCKLDCCKLVKHIK
LLPLGKREEYIRKVAPNIASRKKLLDKLVREPIDGNAWHADHIIPVYKGGGECKLENMRT
LCVACHYEVTRTQHKELKEIRKKAKEHLKNALNKQKDKPSEATEELDDESLLIAVPGSAY
SLGFPGNGSDEKAAE

Transcript Sequence

Transcript ID

Zm00001d022046_T020

Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:168698393:168724503:1 gene:Zm00001d022046 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein

Sequence

CAGAGGCCGCGGCTGCCACCGCCTTTCCCACCTCCGGTGCCTCCACATTCCCTGCCTACG
ACACTGCCGCCGCCGCCGAGTGGAGGCTCGCCAAATGCCCAAGAATCGCCCCGCCCGCGC
GCCAGTTACCGTTTGTACCGCTGCCCCCTCGTCCTTCCCCACCGCCGCTGCCGCCGACTC
CGCCTCAGCCGCCGGTGGGGTTCCAGGTTGTGCTGGAGGTATGCGGCCCCGACGAGTTCT
GGGTGGCGGTGGTGCCGGTAGAAGGCAGGGCCTACCCTGGGGAGGCCGAGTGCCTCGGCG
CCGTCCAGGACTGCCTCGCTGCGGCTTCGGTTGTACAATACTCTGCAACACAGTCGCTAA
GTCAAAGCACACATCTTCGTCCTGTATTTAAGCTTGTGGACTATGGTGTGGTGTTGAAAT
GCCTTAAGAAATTACCTGGAGCTTCTGTGCAAGAAATACCTTCTAGCACAAAGAGAATTA
TTCAGAATATACCTAGGTATCACGTCCAAAAGTGGGCTTCTGATGAAGAAGTACATGAGC
TTCTCAAGAAACTGCCACAGCAAATAAAAGATGCGCTTTTACCCTTCCAACTTGAAGGAG
TGATGTTTGGGCTTCGAAGGCGTGGACGTTGCCTAATTGCAGATGAGATGGGGCTCGGCA
AGACTCTCCAGGCGATTGCAATAGCATGCTGTTTCAAGGACGAGGGCTCTATATTAATAG
TATGTCCAGCTGTATTGCGTTATTCTTGGGCAGAGGAATTGGAACGCTGGGATCCTTCAT
TTATGCCAAAAGATATTCATATTGTATTTGGTCGTCAAGACAGTCTTGAACATCTAAATG
CTACTCCAAGGGCAGTGATTATATCTTACCAGATGCTAAGTCGCCTTAGAGAAAGTATGG
TGAATAGAACATGGGCACTGATGATTGTTGATGAATCACATAACATACGCTGCACGAAGA
AACTAGAAGAAAAATATGAGACAAAAGCTGTGCTACATCTAGCTTCAAAAACTGAACGCA
TCATATTGCTCTCGGGGACACCCTCTTTCTCAAGACCTTTTGATATCTACCACCAGATAA
ATATGCTATGGCCCCACATGCTTGGTACTGATAAATTTGATTATGCGAAAAAATATTGCT
TGCTGCATGTTGCACGAAGTTATCAGGGGAAAATGTTTAAGGACTTCTCTAAGGGCACAC
GGTTGACAGAGTTAAATGTTTTGCTCAGTCAAACTGTCATGATTAGGCGACTGAAGGAGC
ATTTGTTGAATGAACTGCCCCCCAAGCGGCGACAAATTATTAGGTTGAAGCTAAAGGCAC
CAGATATCAGGGCAGCCACATCTTCATGCGGCAAAAGGGTGAACCCTAACAGTTGTAATG
GAACTCTTACAATTGAATTGCCCAGTAAAAGCAATGATGATGAAAATACAAAAGAGGAAG
AAGATGATTGCAAGAAATCTCCAAGGAGTCTCACCCCACAAGAGATTGGTATCGCAAAGT
TATCTGGATTTAGTGAATGGTTCTCAAATCATTTCATCATGAATGGATTTGATGCTAACC
ATAACCTGGATCCCCAGTCTAGCTGTCAGAAAACAATAATATTTGCACATCACTTAAAGG
TTCTAGATGGAATACAGGTGTTTATCTCTGAGAATGAGATCAGATTTGTTCGCATTGATG
GAAGCACACTTCAAAGGGAAAGGAAAGAAGCTGTTGATTCTTTCCGTTTGGATCCAGAGG
TGAAGGTTGCAATAATTGGAATTACTGCTGGTGGTGTTGGCTTAGACTTCTCATCTGCTC
AGAATGTTATTTTTGTGGAGCTCCCAAAATCAGCTTCAGAATTGCTTCAGGCTGAGGATA
GAGCTCATAGACGTGGCCAAAGAAATGCGGTCAACATATATATATTCTGTGGAAAGAACA
CATTGGATGAATCACACTGGCTCCAGTTAAACCAGAGTCTGTTCCGTGTCTCGTCTTTGA
TGAATGGAAAAAAGGATGCTGTAAGGGAGATTGAGGTTGATCAAGTGTGCCAACTTGAAG
AAATCAAGGACACCGAGGAAACACAACGCAAACTGCATCCTTTGGAGAATCATAATGCAG
ATTTGACCCACGTACCAAAAAAACTTCTGGAAAGTGATGATTTGTCCATTGATGGTTTTC
TTGGCATCGAAGATTTGGAATTTGACTTGGATTTCACCATTAGGACAATTCCTCTTGAAT
TTGAGGATGAAAACCCCGGCACATCCTTGAAAAATAATCCAACTCCAACAGTACTTGAAG
ACAGATCTTGTATTGATGTTTCTCTTTCACCAGCTGCAGTCTTTTGCTCTGTACTATCTA
GTTGTAAATCAATAAAGTCTCGTAAGAGGCTTTCTGGAAATTCTGGGTCCTTGAGTCAAG
CTGCATCTGTTCCAGATTTTCCAATTCAAGTGGAGTCTCTGCGTTTTGAGGTTAGCCGGC
ACACAGGACGAATCCACTTGTACAGTTGTGTTCCTGGACATGATTCAAGACCCAAACCAC
TTTGTGAAAATTTTCTGCCAGAAGAATTGAATTCACCTTTATGTTCTCCCAGTGATGTTA
AAACAAGAACTCTTCTCTTGAAAAAGATTCCTTCATTTTGCAATGTGTTCAATGCATTCA
TCAAAGAGTGGTTGGCACTAAGACCAATTGATCAAAATAAATTGCTTGGAAAGCCATTAC
AACTTCCGTTGAACCTTGAGTTGTGTTTTCTGAAAGATAGCATCAATCATAGCACAGAAG
GGATACTTAAAGGGGGAAGTAAGAGGCGTGCTGCATCATTGAATGATGTCAGTAATCCTT
TGCCAGAAAATGCTGAATGGAGACAGGTGGTGTTGCGTAATGGCACCTGTAAAGAGAGAC
AGTACACTCAGGGCTGGACCATTGATGATGAACCTCTCTGCAAACTTTGTCAAGGACTTT
GCAATGGAAGGCTTGCAAAGTCACCAGAATATTTTGAAGATCTATTCTGTAGTTTAGCTT
GTTTCCAGGAATACAGATTAAGAACCAGTGGCAGGGCCCTCCGGCAGGCACTGTTTCAAA
TAGAACGTGGCAAGTGCTCCCAATGCAAGCTCGATTGTTGCAAGCTTGTCAAACACATTA
AACTCTTACCTTTGGGAAAGCGAGAAGAATACATCAGAAAGGTTGCTCCAAACATTGCAA
GTAGAAAGAAACTCCTAGATAAACTTGTCCGTGAACCAATTGATGGAAATGCTTGGCATG
CAGATCACATAATACCTGTTTATAAAGGAGGAGGGGAATGTAAACTCGAGAACATGAGAA
CACTGTGTGTGGCTTGTCATTATGAGGTCACCAGAACTCAGCACAAGGAACTAAAAGAAA
TAAGAAAGAAGGCTAAAGAGCACTTGAAAAACGCCTTGAATAAACAAAAGGATAAACCAA
GTGAAGCAACAGAAGAACTAGATGACGAATCGTTGCTGATAGCTGTCCCGGGTAGTGCCT
ACTCCTTAGGATTTCCTGGCAACGGATCTGATGAAAAGGCTGCTGAATAGGGCATGTTTC
ATTTACCTTGATTATTGTTCAAAAAGGGCGCTGGTATTTTTTAGCTCGCGTCCTTTTTTT
GTACATGTTAAATGCTACCAAGCGTTTGTAAGCTGTTCGGCTGCTCTTATAAGCAGCACT
GATAAGCAACACTATTGCAGCTGCAGAGCTAGAATTATC