Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022046_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:7:168698393:168724503:1 gene:Zm00001d022046 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein
Sequence	ATGTTTGGGCTTCGAAGGCGTGGACGTTGCCTAATTGCAGATGAGATGGGGCTCGGCAAG ACTCTCCAGGCGATTGCAATAGCATGCTGTTTCAAGGACGAGGGCTCTATATTAATAGTA TGTCCAGCTGTATTGCGTTATTCTTGGGCAGAGGAATTGGAACGCTGGGATCCTTCATTT ATGCCAAAAGATATTCATATTGTATTTGGTCGTCAAGACAGTCTTGAACATCTAAATGCT ACTCCAAGGGCAGTGATTATATCTTACCAGATGCTAAGTCGCCTTAGAGAAAGTATGGTG AATAGAACATGGGCACTGATGATTGTTGATGAATCACATAACATACGCTGCACGAAGAAA CTAGAAGAAAAATATGAGACAAAAGCTGTGCTACATCTAGCTTCAAAAACTGAACGCATC ATATTGCTCTCGGGGACACCCTCTTTCTCAAGACCTTTTGATATCTACCACCAGATAAAT ATGCTATGGCCCCACATGCTTGGTACTGATAAATTTGATTATGCGAAAAAATATTGCTTG CTGCATGTTGCACGAAGTTATCAGGGGAAAATGTTTAAGGACTTCTCTAAGGGCACACGG TTGACAGAGTTAAATGTTTTGCTCAGTCAAACTGTCATGATTAGGCGACTGAAGGAGCAT TTGTTGAATGAACTGCCCCCCAAGCGGCGACAAATTATTAGGTTGAAGCTAAAGGCACCA GATATCAGGGCAGCCACATCTTCATGCGGCAAAAGGGTGAACCCTAACAGTTGTAATGGA ACTCTTACAATTGAATTGCCCAGTAAAAGCAATGATGATGAAAATACAAAAGAGGAAGAA GATGATTGCAAGAAATCTCCAAGGAGTCTCACCCCACAAGAGATTGGTATCGCAAAGTTA TCTGGATTTAGTGAATGGTTCTCAAATCATTTCATCATGAATGGATTTGATGCTAACCAT AACCTGGATCCCCAGTCTAGCTGTCAGAAAACAATAATATTTGCACATCACTTAAAGGTT CTAGATGGAATACAGGTGTTTATCTCTGAGAATGAGATCAGATTTGTTCGCATTGATGGA AGCACACTTCAAAGGGAAAGGAAAGAAGCTGTTGATTCTTTCCGTTTGGATCCAGAGGTG AAGGTTGCAATAATTGGAATTACTGCTGGTGGTGTTGGCTTAGACTTCTCATCTGCTCAG AATGTTATTTTTGTGGAGCTCCCAAAATCAGCTTCAGAATTGCTTCAGGCTGAGGATAGA GCTCATAGACGTGGCCAAAGAAATGCGGTCAACATATATATATTCTGTGGAAAGAACACA TTGGATGAATCACACTGGCTCCAGTTAAACCAGAGTCTGTTCCGTGTCTCGTCTTTGATG AATGGAAAAAAGGATGCTGTAAGGGAGATTGAGGTTGATCAAGTGTGCCAACTTGAAGAA ATCAAGGACACCGAGGAAACACAACGCAAACTGCATCCTTTGGAGAATCATAATGCAGAT TTGACCCACGTACCAAAAAAACTTCTGGAAAGTGATGATTTGTCCATTGATGGTTTTCTT GGCATCGAAGATTTGGAATTTGACTTGGATTTCACCATTAGGACAATTCCTCTTGAATTT GAGGATGAAAACCCCGGCACATCCTTGAAAAATAATCCAACTCCAACAGTACTTGAAGAC AGATCTTGTATTGATGTTTCTCTTTCACCAGCTGCAGTCTTTTGCTCTGTACTATCTAGT TGTAAATCAATAAAGTCTCGTAAGAGGCTTTCTGGAAATTCTGGGTCCTTGAGTCAAGCT GCATCTGTTCCAGATTTTCCAATTCAAGTGGAGTCTCTGCGTTTTGAGGTTAGCCGGCAC ACAGGACGAATCCACTTGTACAGTTGTGTTCCTGGACATGATTCAAGACCCAAACCACTT TGTGAAAATTTTCTGCCAGAAGAATTGAATTCACCTTTATGTTCTCCCAGTGATGTTAAA ACAAGAACTCTTCTCTTGAAAAAGATTCCTTCATTTTGCAATGTGTTCAATGCATTCATC AAAGAGTGGTTGGCACTAAGACCAATTGATCAAAATAAATTGCTTGGAAAGCCATTACAA CTTCCGTTGAACCTTGAGTTGTGTTTTCTGAAAGATAGCATCAATCATAGCACAGAAGGG ATACTTAAAGGGGGAAGTAAGAGGCGTGCTGCATCATTGAATGATGTCAGTAATCCTTTG CCAGAAAATGCTGAATGGAGACAGGTGGTGTTGCGTAATGGCACCTGTAAAGAGAGACAG TACACTCAGGGCTGGACCATTGATGATGAACCTCTCTGCAAACTTTGTCAAGGACTTTGC AATGGAAGGCTTGCAAAGTCACCAGAATATTTTGAAGATCTATTCTGTAGTTTAGCTTGT TTCCAGGAATACAGATTAAGAACCAGTGGCAGGGCCCTCCGGCAGGCACTGTTTCAAATA GAACGTGGCAAGTGCTCCCAATGCAAGCTCGATTGTTGCAAGCTTGTCAAACACATTAAA CTCTTACCTTTGGGAAAGCGAGAAGAATACATCAGAAAGGTTGCTCCAAACATTGCAAGT AGAAAGAAACTCCTAGATAAACTTGTCCGTGAACCAATTGATGGAAATGCTTGGCATGCA GATCACATAATACCTGTTTATAAAGGAGGAGGGGAATGTAAACTCGAGAACATGAGAACA CTGTGTGTGGCTTGTCATTATGAGGTCACCAGAACTCAGCACAAGGAACTAAAAGAAATA AGAAAGAAGGCTAAAGAGCACTTGAAAAACGCCTTGAATAAACAAAAGGATAAACCAAGT GAAGCAACAGAAGAACTAGATGACGAATCGTTGCTGATAGCTGTCCCGGGTAGTGCCTAC TCCTTAGGATTTCCTGGCAACGGATCTGATGAAAAGGCTGCTGAATAG

Peptide Sequence

PEP ID	Zm00001d022046_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:7:168698393:168724503:1 gene:Zm00001d022046 transcript:Zm00001d022046_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein
Sequence	MFGLRRRGRCLIADEMGLGKTLQAIAIACCFKDEGSILIVCPAVLRYSWAEELERWDPSF MPKDIHIVFGRQDSLEHLNATPRAVIISYQMLSRLRESMVNRTWALMIVDESHNIRCTKK LEEKYETKAVLHLASKTERIILLSGTPSFSRPFDIYHQINMLWPHMLGTDKFDYAKKYCL LHVARSYQGKMFKDFSKGTRLTELNVLLSQTVMIRRLKEHLLNELPPKRRQIIRLKLKAP DIRAATSSCGKRVNPNSCNGTLTIELPSKSNDDENTKEEEDDCKKSPRSLTPQEIGIAKL SGFSEWFSNHFIMNGFDANHNLDPQSSCQKTIIFAHHLKVLDGIQVFISENEIRFVRIDG STLQRERKEAVDSFRLDPEVKVAIIGITAGGVGLDFSSAQNVIFVELPKSASELLQAEDR AHRRGQRNAVNIYIFCGKNTLDESHWLQLNQSLFRVSSLMNGKKDAVREIEVDQVCQLEE IKDTEETQRKLHPLENHNADLTHVPKKLLESDDLSIDGFLGIEDLEFDLDFTIRTIPLEF EDENPGTSLKNNPTPTVLEDRSCIDVSLSPAAVFCSVLSSCKSIKSRKRLSGNSGSLSQA ASVPDFPIQVESLRFEVSRHTGRIHLYSCVPGHDSRPKPLCENFLPEELNSPLCSPSDVK TRTLLLKKIPSFCNVFNAFIKEWLALRPIDQNKLLGKPLQLPLNLELCFLKDSINHSTEG ILKGGSKRRAASLNDVSNPLPENAEWRQVVLRNGTCKERQYTQGWTIDDEPLCKLCQGLC NGRLAKSPEYFEDLFCSLACFQEYRLRTSGRALRQALFQIERGKCSQCKLDCCKLVKHIK LLPLGKREEYIRKVAPNIASRKKLLDKLVREPIDGNAWHADHIIPVYKGGGECKLENMRT LCVACHYEVTRTQHKELKEIRKKAKEHLKNALNKQKDKPSEATEELDDESLLIAVPGSAY SLGFPGNGSDEKAAE

Transcript Sequence

Transcript ID	Zm00001d022046_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:168698393:168724503:1 gene:Zm00001d022046 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein
Sequence	CAGAGGCCGCGGCTGCCACCGCCTTTCCCACCTCCGGTGCCTCCACATTCCCTGCCTACG ACACTGCCGCCGCCGCCGAGTGGAGGCTCGCCAAATGCCCAAGAATCGCCCCGCCCGCGC GCCAGTTACCGTTTGTACCGCTGCCCCCTCGTCCTTCCCCACCGCCGCTGCCGCCGACTC CGCCTCAGCCGCCGGTGGGGTTCCAGGTTGTGCTGGAGGTATGCGGCCCCGACGAGTTCT GGGTGGCGGTGGTGCCGGTAGAAGGCAGGGCCTACCCTGGGGAGGCCGAGTGCCTCGGCG CCGTCCAGGACTGCCTCGCTGCGGCTTCGGTTGTACAATACTCTGCAACACAGTCGCTAA GTCAAAGCACACATCTTCGTCCTGTATTTAAGCTTGTGGACTATGGTGTGGTGTTGAAAT GCCTTAAGAAATTACCTGGAGCTTCTGTGCAAGAAATACCTTCTAGCACAAAGAGAATTA TTCAGAATATACCTAGGTATCACGTCCAAAAGTGGGCTTCTGATGAAGAAGTACATGAGC TTCTCAAGAAACTGCCACAGCAAATAAAAGATGCGCTTTTACCCTTCCAACTTGAAGGAG TGATGTTTGGGCTTCGAAGGCGTGGACGTTGCCTAATTGCAGATGAGATGGGGCTCGGCA AGACTCTCCAGGCGATTGCAATAGCATGCTGTTTCAAGGACGAGGGCTCTATATTAATAG TATGTCCAGCTGTATTGCGTTATTCTTGGGCAGAGGAATTGGAACGCTGGGATCCTTCAT TTATGCCAAAAGATATTCATATTGTATTTGGTCGTCAAGACAGTCTTGAACATCTAAATG CTACTCCAAGGGCAGTGATTATATCTTACCAGATGCTAAGTCGCCTTAGAGAAAGTATGG TGAATAGAACATGGGCACTGATGATTGTTGATGAATCACATAACATACGCTGCACGAAGA AACTAGAAGAAAAATATGAGACAAAAGCTGTGCTACATCTAGCTTCAAAAACTGAACGCA TCATATTGCTCTCGGGGACACCCTCTTTCTCAAGACCTTTTGATATCTACCACCAGATAA ATATGCTATGGCCCCACATGCTTGGTACTGATAAATTTGATTATGCGAAAAAATATTGCT TGCTGCATGTTGCACGAAGTTATCAGGGGAAAATGTTTAAGGACTTCTCTAAGGGCACAC GGTTGACAGAGTTAAATGTTTTGCTCAGTCAAACTGTCATGATTAGGCGACTGAAGGAGC ATTTGTTGAATGAACTGCCCCCCAAGCGGCGACAAATTATTAGGTTGAAGCTAAAGGCAC CAGATATCAGGGCAGCCACATCTTCATGCGGCAAAAGGGTGAACCCTAACAGTTGTAATG GAACTCTTACAATTGAATTGCCCAGTAAAAGCAATGATGATGAAAATACAAAAGAGGAAG AAGATGATTGCAAGAAATCTCCAAGGAGTCTCACCCCACAAGAGATTGGTATCGCAAAGT TATCTGGATTTAGTGAATGGTTCTCAAATCATTTCATCATGAATGGATTTGATGCTAACC ATAACCTGGATCCCCAGTCTAGCTGTCAGAAAACAATAATATTTGCACATCACTTAAAGG TTCTAGATGGAATACAGGTGTTTATCTCTGAGAATGAGATCAGATTTGTTCGCATTGATG GAAGCACACTTCAAAGGGAAAGGAAAGAAGCTGTTGATTCTTTCCGTTTGGATCCAGAGG TGAAGGTTGCAATAATTGGAATTACTGCTGGTGGTGTTGGCTTAGACTTCTCATCTGCTC AGAATGTTATTTTTGTGGAGCTCCCAAAATCAGCTTCAGAATTGCTTCAGGCTGAGGATA GAGCTCATAGACGTGGCCAAAGAAATGCGGTCAACATATATATATTCTGTGGAAAGAACA CATTGGATGAATCACACTGGCTCCAGTTAAACCAGAGTCTGTTCCGTGTCTCGTCTTTGA TGAATGGAAAAAAGGATGCTGTAAGGGAGATTGAGGTTGATCAAGTGTGCCAACTTGAAG AAATCAAGGACACCGAGGAAACACAACGCAAACTGCATCCTTTGGAGAATCATAATGCAG ATTTGACCCACGTACCAAAAAAACTTCTGGAAAGTGATGATTTGTCCATTGATGGTTTTC TTGGCATCGAAGATTTGGAATTTGACTTGGATTTCACCATTAGGACAATTCCTCTTGAAT TTGAGGATGAAAACCCCGGCACATCCTTGAAAAATAATCCAACTCCAACAGTACTTGAAG ACAGATCTTGTATTGATGTTTCTCTTTCACCAGCTGCAGTCTTTTGCTCTGTACTATCTA GTTGTAAATCAATAAAGTCTCGTAAGAGGCTTTCTGGAAATTCTGGGTCCTTGAGTCAAG CTGCATCTGTTCCAGATTTTCCAATTCAAGTGGAGTCTCTGCGTTTTGAGGTTAGCCGGC ACACAGGACGAATCCACTTGTACAGTTGTGTTCCTGGACATGATTCAAGACCCAAACCAC TTTGTGAAAATTTTCTGCCAGAAGAATTGAATTCACCTTTATGTTCTCCCAGTGATGTTA AAACAAGAACTCTTCTCTTGAAAAAGATTCCTTCATTTTGCAATGTGTTCAATGCATTCA TCAAAGAGTGGTTGGCACTAAGACCAATTGATCAAAATAAATTGCTTGGAAAGCCATTAC AACTTCCGTTGAACCTTGAGTTGTGTTTTCTGAAAGATAGCATCAATCATAGCACAGAAG GGATACTTAAAGGGGGAAGTAAGAGGCGTGCTGCATCATTGAATGATGTCAGTAATCCTT TGCCAGAAAATGCTGAATGGAGACAGGTGGTGTTGCGTAATGGCACCTGTAAAGAGAGAC AGTACACTCAGGGCTGGACCATTGATGATGAACCTCTCTGCAAACTTTGTCAAGGACTTT GCAATGGAAGGCTTGCAAAGTCACCAGAATATTTTGAAGATCTATTCTGTAGTTTAGCTT GTTTCCAGGAATACAGATTAAGAACCAGTGGCAGGGCCCTCCGGCAGGCACTGTTTCAAA TAGAACGTGGCAAGTGCTCCCAATGCAAGCTCGATTGTTGCAAGCTTGTCAAACACATTA AACTCTTACCTTTGGGAAAGCGAGAAGAATACATCAGAAAGGTTGCTCCAAACATTGCAA GTAGAAAGAAACTCCTAGATAAACTTGTCCGTGAACCAATTGATGGAAATGCTTGGCATG CAGATCACATAATACCTGTTTATAAAGGAGGAGGGGAATGTAAACTCGAGAACATGAGAA CACTGTGTGTGGCTTGTCATTATGAGGTCACCAGAACTCAGCACAAGGAACTAAAAGAAA TAAGAAAGAAGGCTAAAGAGCACTTGAAAAACGCCTTGAATAAACAAAAGGATAAACCAA GTGAAGCAACAGAAGAACTAGATGACGAATCGTTGCTGATAGCTGTCCCGGGTAGTGCCT ACTCCTTAGGATTTCCTGGCAACGGATCTGATGAAAAGGCTGCTGAATAGGGCATGTTTC ATTTACCTTGATTATTGTTCAAAAAGGGCGCTGGTATTTTTTAGCTCGCGTCCTTTTTTT GTACATGTTAAATGCTACCAAGCGTTTGTAAGCTGTTCGGCTGCTCTTATAAGCAGCACT GATAAGCAACACTATTGCAGCTGCAGAGCTAGAATTATC