Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d022016_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:7:168053191:168058662:-1 gene:Zm00001d022016 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	ATGTCTACGGAAGCGACTTTGAACAATTCTGGTGGTTCTGAATCTGCATTGCTGTTACTG GAACAGCTTGCTGAAGTTTTTGGAAAGTTAAAAACTCACACCGAAACATTTCTGCATTTG CAAAATGGCATAAAATGGGAAGATATTGAAGGGCATTTCCTCAGCCTTGATGAGTCGTAC AGAAGCAAGTTTGATGAACTGGTAGAGAAGGAGAAGGCATTAGAAGAAAAGAAAGCTGAA GCTTGTAGGTTGATTGCAGAGAAAGAGGCTAAAGTTTCTACAAAAGAGCATGCCTCACTG AATCAGCTTCAGGAGCTAAGGGATGCTGCTGTCTCTTCTCTAGCAGAGGTTCGACAAAAA TATAAGGTGGAGCTTGCTGAGATACTTGAAGCAAGTGGAAGCAAAGACAAAAAGGTAAGT ACCTCAATCAATGACAACAATGCATCTCGTGCTTCAGAGGAGAATACCCCTGCTAGTGGG TCGGGTGAGGCATCTGAAGCTTTACCTGTTGAGACTAAGCCGCGCCCTGTATTGAAGCAA CTTTGTGAACAGATGGACACCAAAGGCCTTCTGAAATTTCTTTCAGAAAACTGTAGAAAA CTTGCTAGCTTTCGTGATGAACTTTCTGTTGCACTAAAATGTGCAACTGATCCTGCACGC TTCGTACTTAATTCCCTGGAGGGTTTCTTCCCACCAGACCAAACTAATTCACCTGGGAGT AAACATAATGCCCTTGAGGTCCAGCGCAAGAGCTGCATTCTTTTAATGGAAGCTATAGCA CCTGCACTAGGGATGAAGGAGCCTGGTGGCGACGACCCTTGGAGCTCTGAAATTAAGGAG CAAGCCAAGGAAATTGCCGAAGAGTGGAAGAGTAAGTTAGCTGAGATTGACCTGGATGCT TCTAATGGCTATTCATTGGAGGCACAGGCTTTCCTGCAGCTTCTTACAACTTTTAATGTT GATTCGGTGCTTGACGAAGATGAACTATGCAAGATCGTAGTTGCTGTCTCTCGTCGCAAG CAGACTGCTGTATCCTGTCGCTCTCTTGGTCTTAATGAGAAAGTACCAGGTTGGTATCCA CCCAGAATGCCACAAGTATCATTGAGGAGTTGGTTAAGCGGCACAGGCAAATTGATGCAG TTCATTTCATACAAGCTTTTGGGCTTTCGGAGACATTCCCCCCTGCACCTCTGCTGA

Peptide Sequence

PEP ID	Zm00001d022016_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:7:168053191:168058662:-1 gene:Zm00001d022016 transcript:Zm00001d022016_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	MSTEATLNNSGGSESALLLLEQLAEVFGKLKTHTETFLHLQNGIKWEDIEGHFLSLDESY RSKFDELVEKEKALEEKKAEACRLIAEKEAKVSTKEHASLNQLQELRDAAVSSLAEVRQK YKVELAEILEASGSKDKKVSTSINDNNASRASEENTPASGSGEASEALPVETKPRPVLKQ LCEQMDTKGLLKFLSENCRKLASFRDELSVALKCATDPARFVLNSLEGFFPPDQTNSPGS KHNALEVQRKSCILLMEAIAPALGMKEPGGDDPWSSEIKEQAKEIAEEWKSKLAEIDLDA SNGYSLEAQAFLQLLTTFNVDSVLDEDELCKIVVAVSRRKQTAVSCRSLGLNEKVPGWYP PRMPQVSLRSWLSGTGKLMQFISYKLLGFRRHSPLHLC

Transcript Sequence

Transcript ID	Zm00001d022016_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:168053191:168058662:-1 gene:Zm00001d022016 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	GCCGCCCCTTCTCGTCTCGACCTCTCCCCACCGGCTAACCCTAGCAGCGGCACGCGGGCG ACGGCGACCAGTAGAGGGCTAGTCGCGCCACCGGCGAAGGGATTCAGCGGTCTACCCGTC CTCCGACACAGGCGCGGCGGCGTCCTGCAGATTATTATTGGTTTGTTGCAAAATGTCTAC GGAAGCGACTTTGAACAATTCTGGTGGTTCTGAATCTGCATTGCTGTTACTGGAACAGCT TGCTGAAGTTTTTGGAAAGTTAAAAACTCACACCGAAACATTTCTGCATTTGCAAAATGG CATAAAATGGGAAGATATTGAAGGGCATTTCCTCAGCCTTGATGAGTCGTACAGAAGCAA GTTTGATGAACTGGTAGAGAAGGAGAAGGCATTAGAAGAAAAGAAAGCTGAAGCTTGTAG GTTGATTGCAGAGAAAGAGGCTAAAGTTTCTACAAAAGAGCATGCCTCACTGAATCAGCT TCAGGAGCTAAGGGATGCTGCTGTCTCTTCTCTAGCAGAGGTTCGACAAAAATATAAGGT GGAGCTTGCTGAGATACTTGAAGCAAGTGGAAGCAAAGACAAAAAGGTAAGTACCTCAAT CAATGACAACAATGCATCTCGTGCTTCAGAGGAGAATACCCCTGCTAGTGGGTCGGGTGA GGCATCTGAAGCTTTACCTGTTGAGACTAAGCCGCGCCCTGTATTGAAGCAACTTTGTGA ACAGATGGACACCAAAGGCCTTCTGAAATTTCTTTCAGAAAACTGTAGAAAACTTGCTAG CTTTCGTGATGAACTTTCTGTTGCACTAAAATGTGCAACTGATCCTGCACGCTTCGTACT TAATTCCCTGGAGGGTTTCTTCCCACCAGACCAAACTAATTCACCTGGGAGTAAACATAA TGCCCTTGAGGTCCAGCGCAAGAGCTGCATTCTTTTAATGGAAGCTATAGCACCTGCACT AGGGATGAAGGAGCCTGGTGGCGACGACCCTTGGAGCTCTGAAATTAAGGAGCAAGCCAA GGAAATTGCCGAAGAGTGGAAGAGTAAGTTAGCTGAGATTGACCTGGATGCTTCTAATGG CTATTCATTGGAGGCACAGGCTTTCCTGCAGCTTCTTACAACTTTTAATGTTGATTCGGT GCTTGACGAAGATGAACTATGCAAGATCGTAGTTGCTGTCTCTCGTCGCAAGCAGACTGC TGTATCCTGTCGCTCTCTTGGTCTTAATGAGAAAGTACCAGGTTGGTATCCACCCAGAAT GCCACAAGTATCATTGAGGAGTTGGTTAAGCGGCACAGGCAAATTGATGCAGTTCATTTC ATACAAGCTTTTGGGCTTTCGGAGACATTCCCCCCTGCACCTCTGCTGAAGACATATGTT GAGGAACAAAAGGATACAATTGAAAATAATGGCGATGCAACTGCGATCTCATTAACGGTT TGTTTATTTTCTCATTTTTGTGATTTTGATGCGACTGTCTAGTGGCATCATAGTTCATTG GTCTAACAGAACTACTTCATTCTCTAGTGTACTGTAAAATAAAGCTTATGAAGTTATTTT TTATTTCATTTTTTGTTCTTAATAAGGTATGAAAAATTTGAGGTATAACTAACTTCTTAT ATCTTTTTTTGTGGATAATTTGGTTTTTTTAAATTATGTAACTTGGAGGGATAGGTTTTT TACTGAATAAAGAATGGAAAAAAGACCTTTTTTAGGGTATGGGTATTAATTGGTTACGAG TTCCTCAGCCTGTCAGCTGGTACAAGAGAACAAGGGTAGACCCGGAGGCCACCACATGAG TGGGGTATGGGAAAGGAATAAACTGAGGCAAGTCTTCTTTCCGCAAAGCGAAGAGGCTGC TTCAAACTTGTGAGTTTGTGACCTGGTGACTCAGCGAGACAGCTCTCACCAGTCACCACT TCACCATGCTTGCTGTTCTTGGTACAAGAGAACGAAATCTGGATAATACCAATTCCTATT TGCTGTAAAATGATTCAAACTACTAAGTAATTGTTTTTAAGTTTGATAATATTGACCATT GGGAGCCCATCTTTAATTTCTTGAAATTTATCTTACCTTTACCTCCAGAATTTTCTAGGG AAATGCTATATTGCTCTCAGCATATAATGTTTGCTGTCTGTGAATATTACTGTGCAACTG TTGCTAGGCGCTTCGGCTTACCGCACAATTGTCTCGTGCATTGTGGGATAATGACCACAA TGTTATTAGTAATGTGAAATAAGTCCTTATATTAAATCATGTTGTATGATAGTTTTACAT TTGATTTGCAATTCTTTTTTTATTTCTATTGTTTGTTATTTTATAACTTTACAAGTTTGT CTCATGACTCGATAAATCCAATTTTCAGGATGACCCCAAATCTAGGGAGCTAATTGCTTT GAGGGCTGTGATTAAGTGTATCGAAGAGCATAAGCTTCAGAAGGAGTGTTCACTTGGACC TCTCCAGAAGCGTGTTTCTGAGCTGAAGCCCAAGGGTGAGAAAAGGCCATCAAGTGATGC TGGGCGTACTTATGCAAAGAAGCCTCGAGGCCCTGGCATTTCATTTCCTAGGAGACCTGC CGGTTCTGTTGGTTCAGCTGCTCGCAGGCCTCCATTTCCGGGCTATACCTGGCAGCGTGC TCCTGCGCCGATGCCCTCCCGTGGTCCTGCTCCAGTGCCCTCCCGTGCCCCTCTTCCTGC CCCTCTTCCTGATAGATATGGAGCTGCTGACCGGTACCATTACACACCACCAGCCCCAGC ATACGACTCTGGTGCATTTTCGTCTTACAGTGAACCTTTCAGTGCCCCAAAACCATTCCA GTACACTCCAGGGTCAGTGGCAGCATCATACAATTCAAGCCCCTATAAAGTCGCTTATGG TGGCCCAGGAGCACCAGTCAGAAGCACCTATCCAGGTTATGCCAGCGCATCTGGGCCGGC TGCTTCCAGCAGCTATGCAAATTATATGGGATCCGTATATCGCCCTCCCCAGCAACCATA GATTCGACTCCTCCCTCAAAAAATGTTGTGCTGGTGATGCAAGACATGGAAACCAGTCCC TCCCATCCAACTCCCATGGCGGAGATGTAAACTTGAGCTATTTTCTTGTTTCATCGTCCA CAACAGTGGGGTTTGGAGGTGTATACTGATGCTCTCATGTCCAGCTACATCTACAATGTA CCTTGCACTCTTGTTTGCTTTTAGCTGTGCTTATTCCTGAGTCGTTGAATGTTTTATATT TTCTTTCCACAAGTCTGTCTCATGTAGGGAACTGTCTCATCTAGGAATATAACTCCTTTA CTTGC