Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021980_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:167518663:167521071:-1 gene:Zm00001d021980 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGCGGCCACCGCCGCCGCACGGGGTCACCTCCTTGCCCCATCAATGCTCCGTCCTC CTGCGGCGCCTCGCCGCGAGCCGTTCCCTGGCCTCTTCCTCCTACTTCCTCCGCGCACTC CGCTGCCTCCACGCGCGCCTCCTCACCTCCGCGCTCCTCCATGCGCCGCCGCACCCGCAC CTCACCCTCCGCCTCATCCACCTCTACACTCTCTCCCGAGACCTCCCCGCCGCCGCGACC CTCTTCTGCGCCGACCCGTGCCCCGTTTCCGCCACTTCCCTCGTCGCCGCGTACGCCGCC GCGGACCGCCTCCCCGCCGCCGTCTCCTTCTTCGACGCCGTCCCGCCGGCGCGCCGCGAC ACCGTTCTCCACAACGCCGTGATCTCCGCCTACGCCCGCGCGTCCCACGCTGCGCCCGCG GTTGCCGTGTTCCGCTCCCTGCTCGCCTCCGGCTCCCTTCGGCCCGACGACTACTCATTC ACCGCGCTACTGAGCGCCGGGGGCCACCTGCCCAACATTTCTGTCCGGCACTGCGCGCAG CTACATTGCTCAGTGCTGAAGTCCGGCGCCGGGGGTGCCTTGTCGGTGTGCAACGCGCTC GTTGCCCTGTACATGAAATGTGAATCGCCCGAGGCGACACGAGATGCACGGAAGGTGCTC GACGAAATGCCGAATAAGGACGACCTTACGTGGACTACTATGGTCGTTGGCTATGTTAGG AGAGGCGACGTTGGTGCTGCAAGATCAGTTTTCGAGGAGGTTGATGGGAAGTTTGATGTT GTGTGGAATGCCATGATCTCAGGGTATGTTCATTCAGGAATGGCTGTGGAGGCGTTTGAG CTGTTTAGAAGGATGGTATTGGAAAGGGTGCCTCTTGATGAGTTCACATTTACTAGTGTT CTGAGTGCTTGTGCAAATGTTGGCCTCTTTGCACATGGGAAATCTGTCCATGGTCAGATT ATTCGGCTGCAGCCAAATTTTGTACCTGAGGCAGCTCTCCCTGTTAACAACGCCTTGGTG ACCTTCTACTCAAAGTGTGGGAATATTGCTGTTGCAAGAAGGATATTTGACAATATGACA TTGAAGGATGTCGTTTCTTGGAACACCATTTTGTCGGGGTATGTTGAGAGCAGCTGTTTG GACAAGGCGGTCGAAGTATTTGAGGAGATGCCATATAAAAATGAGTTGTCATGGATGGTG ATGGTATCAGGATATGTGCATGGAGGATTTGCTGAAGATGCACTTAAACTGTTTAACAAG ATGAGGTCTGAGAATGTCAAGCCGTGTGACTACACCTATGCTGGTGCTATTGCTGCATGT GGCGAGCTCGGGGCACTGAAGCATGGAAAGCAGCTTCATGGGCATATTGTGCAGCTTGGT TTTGAGGGGAGCAATTCTGCAGGAAACGCACTCATTACCATGTATGCTAGATGTGGTGCT GTGAAAGAAGCTCATCTTATGTTTCTTGTGATGCCCAATATTGACTCTGTTTCGTGGAAT GCTATGATTTCAGCCCTTGGGCAGCATGGACATGGAAGAGAGGCACTAGAACTCTTTGAT CGCATGGTTGCTGAAGGCATATATCCTGATAGGATCTCTTTCCTCACAGTATTGACAGCT TGCAATCACTCTGGTCTCGTAGATGAAGGCTTTCGATATTTCGAGTCCATGAAGAGGGAC TTTGGCATTATACCTGGAGAAGATCACTATACGCGACTGATTGATTTGCTCGGTCGAGCT GGACGGATTGGAGAAGCTAGAGACTTGATCAAGACGATGCCTTTTGAGCCTACCCCATCC ATTTGGGAGGCAATTCTTTCTGGTTGCCGGACTAGTGGAGATATGGAACTTGGTGCTCAT GCTGCTGACCAGCTCTTTAAGATGACACCACAGCATGATGGTACATATATCCTTTTGTCT AACACTTACTCAGCTGCGGGATGTTGGGTAGATGCTGCCAGAGTAAGGAAGCTAATGCGT GATCGAGGGGTTAAGAAGGAACCTGGGTGCAGCTGGATAGAAGCTGGAAACAAAGTTCAT GTGTTTCTCGTTGGTGATACAAAACATCCAGAAGCACATGAAGTTTACAAATTCCTTGAA ATGGTTGGCGCCAAGATGAGAAAGCTTGGATATGTTCCTGATACAAAGGTTGTATTGCAT GACATGGAGCCTCATCAGAAGGAACATATATTATTTGCGCATAGTGAGCGACTGGCGGTT GGTTTTGGACTCCTAAACTTGCCTCCTGGAGCTACGGTTACAGTTCTTAAGAACTTGAGA ATATGTGATGATTGTCATGCTGCAATAATGTTCATGTCAAAGGCTGTCGGAAGAGAGATT GTTGTTAGAGATGTTAGACGGTTTCACCATTTCAAGGATGGAGAATGTTCGTGTGGTAAC TATTGGTGA

Peptide Sequence

PEP ID	Zm00001d021980_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:167518663:167521071:-1 gene:Zm00001d021980 transcript:Zm00001d021980_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPRPPPPHGVTSLPHQCSVLLRRLAASRSLASSSYFLRALRCLHARLLTSALLHAPPHPH LTLRLIHLYTLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRD TVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQ LHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVR RGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSV LSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMT LKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNK MRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGA VKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA CNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPS IWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMR DRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLH DMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREI VVRDVRRFHHFKDGECSCGNYW

Transcript Sequence

Transcript ID	Zm00001d021980_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:167518663:167521071:-1 gene:Zm00001d021980 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGCGGCCACCGCCGCCGCACGGGGTCACCTCCTTGCCCCATCAATGCTCCGTCCTC CTGCGGCGCCTCGCCGCGAGCCGTTCCCTGGCCTCTTCCTCCTACTTCCTCCGCGCACTC CGCTGCCTCCACGCGCGCCTCCTCACCTCCGCGCTCCTCCATGCGCCGCCGCACCCGCAC CTCACCCTCCGCCTCATCCACCTCTACACTCTCTCCCGAGACCTCCCCGCCGCCGCGACC CTCTTCTGCGCCGACCCGTGCCCCGTTTCCGCCACTTCCCTCGTCGCCGCGTACGCCGCC GCGGACCGCCTCCCCGCCGCCGTCTCCTTCTTCGACGCCGTCCCGCCGGCGCGCCGCGAC ACCGTTCTCCACAACGCCGTGATCTCCGCCTACGCCCGCGCGTCCCACGCTGCGCCCGCG GTTGCCGTGTTCCGCTCCCTGCTCGCCTCCGGCTCCCTTCGGCCCGACGACTACTCATTC ACCGCGCTACTGAGCGCCGGGGGCCACCTGCCCAACATTTCTGTCCGGCACTGCGCGCAG CTACATTGCTCAGTGCTGAAGTCCGGCGCCGGGGGTGCCTTGTCGGTGTGCAACGCGCTC GTTGCCCTGTACATGAAATGTGAATCGCCCGAGGCGACACGAGATGCACGGAAGGTGCTC GACGAAATGCCGAATAAGGACGACCTTACGTGGACTACTATGGTCGTTGGCTATGTTAGG AGAGGCGACGTTGGTGCTGCAAGATCAGTTTTCGAGGAGGTTGATGGGAAGTTTGATGTT GTGTGGAATGCCATGATCTCAGGGTATGTTCATTCAGGAATGGCTGTGGAGGCGTTTGAG CTGTTTAGAAGGATGGTATTGGAAAGGGTGCCTCTTGATGAGTTCACATTTACTAGTGTT CTGAGTGCTTGTGCAAATGTTGGCCTCTTTGCACATGGGAAATCTGTCCATGGTCAGATT ATTCGGCTGCAGCCAAATTTTGTACCTGAGGCAGCTCTCCCTGTTAACAACGCCTTGGTG ACCTTCTACTCAAAGTGTGGGAATATTGCTGTTGCAAGAAGGATATTTGACAATATGACA TTGAAGGATGTCGTTTCTTGGAACACCATTTTGTCGGGGTATGTTGAGAGCAGCTGTTTG GACAAGGCGGTCGAAGTATTTGAGGAGATGCCATATAAAAATGAGTTGTCATGGATGGTG ATGGTATCAGGATATGTGCATGGAGGATTTGCTGAAGATGCACTTAAACTGTTTAACAAG ATGAGGTCTGAGAATGTCAAGCCGTGTGACTACACCTATGCTGGTGCTATTGCTGCATGT GGCGAGCTCGGGGCACTGAAGCATGGAAAGCAGCTTCATGGGCATATTGTGCAGCTTGGT TTTGAGGGGAGCAATTCTGCAGGAAACGCACTCATTACCATGTATGCTAGATGTGGTGCT GTGAAAGAAGCTCATCTTATGTTTCTTGTGATGCCCAATATTGACTCTGTTTCGTGGAAT GCTATGATTTCAGCCCTTGGGCAGCATGGACATGGAAGAGAGGCACTAGAACTCTTTGAT CGCATGGTTGCTGAAGGCATATATCCTGATAGGATCTCTTTCCTCACAGTATTGACAGCT TGCAATCACTCTGGTCTCGTAGATGAAGGCTTTCGATATTTCGAGTCCATGAAGAGGGAC TTTGGCATTATACCTGGAGAAGATCACTATACGCGACTGATTGATTTGCTCGGTCGAGCT GGACGGATTGGAGAAGCTAGAGACTTGATCAAGACGATGCCTTTTGAGCCTACCCCATCC ATTTGGGAGGCAATTCTTTCTGGTTGCCGGACTAGTGGAGATATGGAACTTGGTGCTCAT GCTGCTGACCAGCTCTTTAAGATGACACCACAGCATGATGGTACATATATCCTTTTGTCT AACACTTACTCAGCTGCGGGATGTTGGGTAGATGCTGCCAGAGTAAGGAAGCTAATGCGT GATCGAGGGGTTAAGAAGGAACCTGGGTGCAGCTGGATAGAAGCTGGAAACAAAGTTCAT GTGTTTCTCGTTGGTGATACAAAACATCCAGAAGCACATGAAGTTTACAAATTCCTTGAA ATGGTTGGCGCCAAGATGAGAAAGCTTGGATATGTTCCTGATACAAAGGTTGTATTGCAT GACATGGAGCCTCATCAGAAGGAACATATATTATTTGCGCATAGTGAGCGACTGGCGGTT GGTTTTGGACTCCTAAACTTGCCTCCTGGAGCTACGGTTACAGTTCTTAAGAACTTGAGA ATATGTGATGATTGTCATGCTGCAATAATGTTCATGTCAAAGGCTGTCGGAAGAGAGATT GTTGTTAGAGATGTTAGACGGTTTCACCATTTCAAGGATGGAGAATGTTCGTGTGGTAAC TATTGGTGA