Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021972_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:7:167285813:167331067:-1 gene:Zm00001d021972 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid-transporting ATPase 2
Sequence

ATGAGTAGGGGTGTCCCAGAACCCAAGCTAACTGCTATGGATGCAATGATTGATAAGCTT
ACTGGTGCCATATTCTTATTTCAACTTACAGTCGTTGTCGTTCTTGGGGCTGCAGGCAAT
ATTTGGAAGGATATGGAAGCTCGCAAGCAATGGTATGTTAAGTATGATGACAATGAACCA
TGGTATCAGATTCTGGTTATACCTCTGCGGTTTGAACTATTGTGCTCTATTATGATTCCC
ATTTCGATAAAGGTTTCTTTGGACTTTGTTAAAAGTCTCTATGCAAAGTTCATAGATTGG
GATGATGATATTTATGACCTGGAAAATGACACACCTGCCCGTGCAGCAAACACAGCAATT
AGTGAGGACTTGGGACAGGTTGAATATATTTTGACAGATAAAACTGGGACATTGACTGAG
AACAAGATGATCTTCAGAAGGTGCTGTATTGGGGGTACCTTTTATGGGAATGAATCTGGA
GATGCGCTCAGAGACGTTGAATTACTGAACGCTGTCGCCAATAATTCTCCTAATGTCATC
AAGTTTTTGACAGTCATGACACTCTGCAATACAGTAATTCCTATAAAAAGTCCTACTGGA
CCAATTTTGTATAAAGCCCAGTCCCAGGATGAGGATGCCCTGGTTAATGCAGCTGCAAAT
TTGCATATGGTTCTTGTCAGCAAGAATGGAAGCAATGCAGAAATTCACTTCAACCGGCGA
GTGATGCAATATGAGATACTTGACATTCTTGAGTTCACATCTGACCGGAAAAGAATGTCT
ATTGTTATTTTGGATTGTCAGAGTGGCAAGTTTTTTCTCTTGTCCAAAGGAGCTGATGAG
GCAATGCTTCCTTGTGCTTATTCTGGACAAAAGACAAAGACATTTGTTGATGCAGTTGAC
AAATATGCTCAGCTGGGGTTGCGCACACTCTGCTTGGGATGGCGTGAGCTGGAACCAGAG
GAATACACTAAATGGTCTCAATCATTTAAGGAGGCCAATAGCTCATTGAATGACAGGGAG
TGGAAAGTTGCTGAGGTTTGCCAAAAGCTAGAACATAGCTTGGAGATTCTAGGTGTCAGT
GCAATAGAAGATCGCCTCCAGGATGGGGTACCAGAAACTATCGAAATACTGAGGCAGTCA
GGAATCAACTTCTGGATGTTAACTGGTGATAAACAAAGTACTGCCATTCAAATTGCTCTT
TTGTGCAACTTGATTTCTTCAGAACCTAAAGGACAGCTCTTGCATATCAATGGGAAAACT
CAAGATGAAGTTGCTAGAAGCTTGGAAAGAGTTCTTCTTACCATGAGGATTACGTCATCA
GAGCCTAAGGAGCTGGCTTTTGTAGTGGATGGCTGGGCACTAGAGATTATTCTATCACGC
TATACTGAAGCTTTTACTGAACTAGCAGTTCTTTCAAAAACTGCATTATGCTGCCGTGTT
ACACCTTCACAAAAAGCACAGCTAGTGAAGCTTCTGAAGTCATGTGACTATCGAACTTTG
GCAATCGGTGATGGTGGGAATGATGTAAGGATGATACAACAGGCTGACATTGGTGTAGGA
ATTAGTGGTAGGGAAGGTCTTCAAGCTGCAAGGGCTGCTGACTATAGCATTGGCAAATTC
AGGTTCCTGAAAAGGTTGATTCTTGTTCATGGGCGGTACTCCTACAATCGCACTGCCTTC
CTGTCGCAGTACTCTTTCTACAAGTCATTGTTAATTTGCTTTATTCAGATACTTTTTTCT
TTTCTTTCAGGCATTGCTGGAACAAGCTTATTCAACTCAGTTAGTTTGATGGCTTATAAT
GTTTTCTACACAAGCATTCCTGTTTTAACTACTGTACTGGACAAGGATTTATCTGAAAAG
ACAGTGATGCAAAATCCAGAGATATTACTTTACTGCCAAGCTGGAAGGCTTCTCAATCCA
AGTACCTTTGCTGGTTGGTTTGGTCGATCATTGTATCATGCAATCATTATTTTCTTAATA
ACCATCCATGCATATGCTAATGAGAAAAGCGAGATGGAGGAGCTCTCAATGGTTGCACTC
TCAGGAAGCATTTGGTTGCAGGCATTTGTTGTGACGTTGGAGATGAATTCCTTCACATCT
GTGCAACTTCTGGCCATATGGGGAAACCTCATTGCCTTCTATGTCCTCAATTTCTTTATC
AGCAGTATACCCACTTCTGGAATGTACACTATCATGTTCGGCCTTTGCAGACAACCGTCA
TACTGGATAACGCTGGTGTTGATCAGTGGAGTTGGAATGGGTCCTGTATTGGCTCTGAAA
TATTTCAGATATACATACAGACCTAGCGTGATCAACATTCTTCAGAAGGCCGAGCGTTCA
CGGGGGCCAATGTACACCCTGCTGAATCTAGAGTCTCAGTTGAGATCAGACAAAGATAGT
ATGATGGTAGCCGGTTCCACAGCGCCAGCCAAGAATAAGAGCTCTGTTTACGAGCCGTTG
CTTTCTGACTCCCCGATGGCATCCAGGAGATCTCTTGCACCAGCATCTTCATTTGATATC
TTCCAGCCAGCACATTCTAGAACATCTCACCCAAGAAACATAAAAGCCAATTAA

Peptide Sequence

PEP ID

Zm00001d021972_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:7:167285813:167331067:-1 gene:Zm00001d021972 transcript:Zm00001d021972_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid-transporting ATPase 2
Sequence

MSRGVPEPKLTAMDAMIDKLTGAIFLFQLTVVVVLGAAGNIWKDMEARKQWYVKYDDNEP
WYQILVIPLRFELLCSIMIPISIKVSLDFVKSLYAKFIDWDDDIYDLENDTPARAANTAI
SEDLGQVEYILTDKTGTLTENKMIFRRCCIGGTFYGNESGDALRDVELLNAVANNSPNVI
KFLTVMTLCNTVIPIKSPTGPILYKAQSQDEDALVNAAANLHMVLVSKNGSNAEIHFNRR
VMQYEILDILEFTSDRKRMSIVILDCQSGKFFLLSKGADEAMLPCAYSGQKTKTFVDAVD
KYAQLGLRTLCLGWRELEPEEYTKWSQSFKEANSSLNDREWKVAEVCQKLEHSLEILGVS
AIEDRLQDGVPETIEILRQSGINFWMLTGDKQSTAIQIALLCNLISSEPKGQLLHINGKT
QDEVARSLERVLLTMRITSSEPKELAFVVDGWALEIILSRYTEAFTELAVLSKTALCCRV
TPSQKAQLVKLLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKF
RFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQILFSFLSGIAGTSLFNSVSLMAYN
VFYTSIPVLTTVLDKDLSEKTVMQNPEILLYCQAGRLLNPSTFAGWFGRSLYHAIIIFLI
TIHAYANEKSEMEELSMVALSGSIWLQAFVVTLEMNSFTSVQLLAIWGNLIAFYVLNFFI
SSIPTSGMYTIMFGLCRQPSYWITLVLISGVGMGPVLALKYFRYTYRPSVINILQKAERS
RGPMYTLLNLESQLRSDKDSMMVAGSTAPAKNKSSVYEPLLSDSPMASRRSLAPASSFDI
FQPAHSRTSHPRNIKAN

Transcript Sequence

Transcript ID

Zm00001d021972_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:167285813:167331067:-1 gene:Zm00001d021972 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phospholipid-transporting ATPase 2
Sequence

AGCAGGCCTGCCCAGCTGACCTCACCTGGACAATCAAGCTGAAGAGAAATATCATAGTGT
GCATGGTTTTTCAGGAATGAAGCGTTTTGTCTACATAAATGATGAGTCTTATCAGAACGA
CTACTGTGATAACCGGGTTTCTAATACAAAGTATACCTTATTGAACTTCGTGCCAAAAAA
CCTATGGGAACAGTTCAGGCGCTTCATGAATCAATATTTCTTGTTGATAGCTTGTCTGCA
ACTATGGTCACTTATCACTCCTGTAAATCCTGCAAGTACCTGGGGCCCACTTATATTTAT
CTTTGCTGTTTCTGCAACCAAAGAGGCATGGGATGACTACAACAGGTATATTTCAGATAA
ACAAGCGAATGATAAGGAAGTGTGGATTGTTAAGAATGGTGCCCGGAAACACATTCAAGC
TCAAGATATCCGTGTCGGTAACATAGTTTGGATTCGAGAGAATGAAGAAGTACCATGTGA
TCTTGTTTTGTTGGGAACTTCTGAACCACAAGGCATCTGTCATGTTGAGACAGCTGCTCT
TGATGGGGAAATTGATTTGAAGACAAGAGCAAGCCCACCACCATGCGTAGGGCTGGAGTT
TGAACAGCTGCACAAAATAAAGGGTGTGATCGAGTGCCCAATACCAGATAAAGACATACG
AAGATTTGATGCAAACATCCGCCTGTTTCCTCCATTCATTGATAATGACATTTGCCCATT
GACTATTAATAACACATTGCTGCAGTCATGCTACTTGAGAAATACAGAATGGGCTTGTGG
TGTAGCAGTTTATACAGCTTTACCAGGAGATTGATTATTGATAATCTCCACTTTCAGGCA
ATGAAACTAAGTTGGGAATGAGTAGGGGTGTCCCAGAACCCAAGCTAACTGCTATGGATG
CAATGATTGATAAGCTTACTGGTGCCATATTCTTATTTCAACTTACAGTCGTTGTCGTTC
TTGGGGCTGCAGGCAATATTTGGAAGGATATGGAAGCTCGCAAGCAATGGTATGTTAAGT
ATGATGACAATGAACCATGGTATCAGATTCTGGTTATACCTCTGCGGTTTGAACTATTGT
GCTCTATTATGATTCCCATTTCGATAAAGGTTTCTTTGGACTTTGTTAAAAGTCTCTATG
CAAAGTTCATAGATTGGGATGATGATATTTATGACCTGGAAAATGACACACCTGCCCGTG
CAGCAAACACAGCAATTAGTGAGGACTTGGGACAGGTTGAATATATTTTGACAGATAAAA
CTGGGACATTGACTGAGAACAAGATGATCTTCAGAAGGTGCTGTATTGGGGGTACCTTTT
ATGGGAATGAATCTGGAGATGCGCTCAGAGACGTTGAATTACTGAACGCTGTCGCCAATA
ATTCTCCTAATGTCATCAAGTTTTTGACAGTCATGACACTCTGCAATACAGTAATTCCTA
TAAAAAGTCCTACTGGACCAATTTTGTATAAAGCCCAGTCCCAGGATGAGGATGCCCTGG
TTAATGCAGCTGCAAATTTGCATATGGTTCTTGTCAGCAAGAATGGAAGCAATGCAGAAA
TTCACTTCAACCGGCGAGTGATGCAATATGAGATACTTGACATTCTTGAGTTCACATCTG
ACCGGAAAAGAATGTCTATTGTTATTTTGGATTGTCAGAGTGGCAAGTTTTTTCTCTTGT
CCAAAGGAGCTGATGAGGCAATGCTTCCTTGTGCTTATTCTGGACAAAAGACAAAGACAT
TTGTTGATGCAGTTGACAAATATGCTCAGCTGGGGTTGCGCACACTCTGCTTGGGATGGC
GTGAGCTGGAACCAGAGGAATACACTAAATGGTCTCAATCATTTAAGGAGGCCAATAGCT
CATTGAATGACAGGGAGTGGAAAGTTGCTGAGGTTTGCCAAAAGCTAGAACATAGCTTGG
AGATTCTAGGTGTCAGTGCAATAGAAGATCGCCTCCAGGATGGGGTACCAGAAACTATCG
AAATACTGAGGCAGTCAGGAATCAACTTCTGGATGTTAACTGGTGATAAACAAAGTACTG
CCATTCAAATTGCTCTTTTGTGCAACTTGATTTCTTCAGAACCTAAAGGACAGCTCTTGC
ATATCAATGGGAAAACTCAAGATGAAGTTGCTAGAAGCTTGGAAAGAGTTCTTCTTACCA
TGAGGATTACGTCATCAGAGCCTAAGGAGCTGGCTTTTGTAGTGGATGGCTGGGCACTAG
AGATTATTCTATCACGCTATACTGAAGCTTTTACTGAACTAGCAGTTCTTTCAAAAACTG
CATTATGCTGCCGTGTTACACCTTCACAAAAAGCACAGCTAGTGAAGCTTCTGAAGTCAT
GTGACTATCGAACTTTGGCAATCGGTGATGGTGGGAATGATGTAAGGATGATACAACAGG
CTGACATTGGTGTAGGAATTAGTGGTAGGGAAGGTCTTCAAGCTGCAAGGGCTGCTGACT
ATAGCATTGGCAAATTCAGGTTCCTGAAAAGGTTGATTCTTGTTCATGGGCGGTACTCCT
ACAATCGCACTGCCTTCCTGTCGCAGTACTCTTTCTACAAGTCATTGTTAATTTGCTTTA
TTCAGATACTTTTTTCTTTTCTTTCAGGCATTGCTGGAACAAGCTTATTCAACTCAGTTA
GTTTGATGGCTTATAATGTTTTCTACACAAGCATTCCTGTTTTAACTACTGTACTGGACA
AGGATTTATCTGAAAAGACAGTGATGCAAAATCCAGAGATATTACTTTACTGCCAAGCTG
GAAGGCTTCTCAATCCAAGTACCTTTGCTGGTTGGTTTGGTCGATCATTGTATCATGCAA
TCATTATTTTCTTAATAACCATCCATGCATATGCTAATGAGAAAAGCGAGATGGAGGAGC
TCTCAATGGTTGCACTCTCAGGAAGCATTTGGTTGCAGGCATTTGTTGTGACGTTGGAGA
TGAATTCCTTCACATCTGTGCAACTTCTGGCCATATGGGGAAACCTCATTGCCTTCTATG
TCCTCAATTTCTTTATCAGCAGTATACCCACTTCTGGAATGTACACTATCATGTTCGGCC
TTTGCAGACAACCGTCATACTGGATAACGCTGGTGTTGATCAGTGGAGTTGGAATGGGTC
CTGTATTGGCTCTGAAATATTTCAGATATACATACAGACCTAGCGTGATCAACATTCTTC
AGAAGGCCGAGCGTTCACGGGGGCCAATGTACACCCTGCTGAATCTAGAGTCTCAGTTGA
GATCAGACAAAGATAGTATGATGGTAGCCGGTTCCACAGCGCCAGCCAAGAATAAGAGCT
CTGTTTACGAGCCGTTGCTTTCTGACTCCCCGATGGCATCCAGGAGATCTCTTGCACCAG
CATCTTCATTTGATATCTTCCAGCCAGCACATTCTAGAACATCTCACCCAAGAAACATAA
AAGCCAATTAATTTTTTGGAACAACAGT