Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021968_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:167232151:167236033:-1 gene:Zm00001d021968 gene_biotype:protein_coding transcript_biotype:protein_coding description:HRT transcription factor

Sequence

ATGCCTGCGCCCGTCGCACCTGTAACCTCCAGGCTGAAGCGGGAAGACTGCCCCCGCACC
AAGCACGACTCCCTCTTTTCCCCATGGAAGGTCCTTGTCGGGCCGTCGGACTGGAGGGAC
CACGCCGCCGGCAAGGAAGGGGTCCAGAGGTACCGCATCCGCAACCTCCCGGACAACTTC
CCCGGCCTCTACGAGCTAGGCGTTGCCTGCGCGGCCGACGAGGGCGTCAGGTCCCGGAGG
CGTGACGCGCGAGGCGTCGTCGTGGTGTACCTCGGCCAGGCCGACAGTGTCCGGGCGAGG
CTGCAGCAGTATGGCCGCTCGGGGTCGCATCTGGACACTACGAACTCGCCGGGCTCTTCT
GATAGAGATGCGGCGAATGCGCTCGCCGAGGGTCCTGGACTCTTCAGAGAAGTGTTCTCC
AGAGGCTACTCCGTCGTGTTTCGATGTGCGCTGATGGACAATAAACAAGAAGCTGAGAAG
ACTGAAGCACTACTCCTGAGAGTATTTGATTATGCATGGAACAAGCTTCAGAATGGTGCT
TGTCGCCGGCAAGAAATACTGCATAAGTTAGAACTGCGAGCAGCCAACCATAGGTCTCTA
CTTAGCAGAGTAAGTGACATGAAACAAAAAATATTTGGACAGAAAGCAGGTATAAATATA
AAGGGAAGTGGGCCAGCTAACACCTCGCCTAGCATAATTAAAAGTATGCTCCCAAGGGTT
CGTACAATCGTTCGTTTCAGACCTCAGTTAGTAAACCCTAACAACAGTGAAGGTGGGATA
ACTGGTATTCCCTATGCAAATAGACAAGCACATAGAAGGAAGTCCAAAGGATACCAAGTA
AAAAAGTTCGATGTTACAAAACGGAGAACTGTGCCGATACATGATTCTAACTCTGTCTGT
GGAGTGCTGCTGGAAGATGGTTTTTGTCTGGAGCACCCAGTTCATGGAAGAAAGAGGTGC
AGCTTACACAAAGGTAAAAGAGTCAAAGGCAGCCCAAAAAGTTCGCCTACTAGCCATCCT
TGCCAAGTTGGGATTGCAATTACTGAGTTTTGCCTAACTGAAGATTTGGACAGCTCGGTC
CCAAAACAGGAAAGCGAAATACGGCCCAAAAATATGTCTACAACTCTGAAAGAACCTCAG
AGGCAAAGCGATAATTTGGAATCACAAAAGGTGAATACTGGAGAAGCTTCTACAGAAGAT
GGAACACAAGAAGTTTCTAGGGATGCTTGTATCTTAGAAGAGAAGGCCTTCTTCCATGCT
GACTCTGAGTCTCAGGAGCAGCAGCCTTCTGGGAGAATGTGGTTTGAGCTGCTCAAATCA
CAGAGGAAACCGGCGAGCGCACATCCATCAAGAAGAGGCTTGGGATCTCAGATAACAGCA
ATGACAGATAACAGGTCCTGCAAAATGGTGTCAATTGCAGGAATGGAAAGGACTGAGAAG
GACAGTGGAGTAGAGGTCACTGCTGCTTCGTTTTCCAGAAGCTCAGGATGGCCCTGTACC
TGTGGCGCCCGTACGTCGGACGGTTCACGTTGTATGAATATGCCGATTGAAGGGAGGAAG
AGATGTGCATTGCACAAAGGGCAAAGGGCAGCATTCCCCCCTACACCATCGGCATAA

Peptide Sequence

PEP ID

Zm00001d021968_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:167232151:167236033:-1 gene:Zm00001d021968 transcript:Zm00001d021968_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:HRT transcription factor

Sequence

MPAPVAPVTSRLKREDCPRTKHDSLFSPWKVLVGPSDWRDHAAGKEGVQRYRIRNLPDNF
PGLYELGVACAADEGVRSRRRDARGVVVVYLGQADSVRARLQQYGRSGSHLDTTNSPGSS
DRDAANALAEGPGLFREVFSRGYSVVFRCALMDNKQEAEKTEALLLRVFDYAWNKLQNGA
CRRQEILHKLELRAANHRSLLSRVSDMKQKIFGQKAGINIKGSGPANTSPSIIKSMLPRV
RTIVRFRPQLVNPNNSEGGITGIPYANRQAHRRKSKGYQVKKFDVTKRRTVPIHDSNSVC
GVLLEDGFCLEHPVHGRKRCSLHKGKRVKGSPKSSPTSHPCQVGIAITEFCLTEDLDSSV
PKQESEIRPKNMSTTLKEPQRQSDNLESQKVNTGEASTEDGTQEVSRDACILEEKAFFHA
DSESQEQQPSGRMWFELLKSQRKPASAHPSRRGLGSQITAMTDNRSCKMVSIAGMERTEK
DSGVEVTAASFSRSSGWPCTCGARTSDGSRCMNMPIEGRKRCALHKGQRAAFPPTPSA

Transcript Sequence

Transcript ID

Zm00001d021968_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:167232151:167236033:-1 gene:Zm00001d021968 gene_biotype:protein_coding transcript_biotype:protein_coding description:HRT transcription factor

Sequence

GGCAGCGGCAGCGGCAGCGGCGGCGCTGAGCCCGACTGCCAGAAACCGGCCACGGGATCA
GGTCCGTCAGACCGATGCCTGCGCCCGTCGCACCTGTAACCTCCAGGCTGAAGCGGGAAG
ACTGCCCCCGCACCAAGCACGACTCCCTCTTTTCCCCATGGAAGGTCCTTGTCGGGCCGT
CGGACTGGAGGGACCACGCCGCCGGCAAGGAAGGGGTCCAGAGGTACCGCATCCGCAACC
TCCCGGACAACTTCCCCGGCCTCTACGAGCTAGGCGTTGCCTGCGCGGCCGACGAGGGCG
TCAGGTCCCGGAGGCGTGACGCGCGAGGCGTCGTCGTGGTGTACCTCGGCCAGGCCGACA
GTGTCCGGGCGAGGCTGCAGCAGTATGGCCGCTCGGGGTCGCATCTGGACACTACGAACT
CGCCGGGCTCTTCTGATAGAGATGCGGCGAATGCGCTCGCCGAGGGTCCTGGACTCTTCA
GAGAAGTGTTCTCCAGAGGCTACTCCGTCGTGTTTCGATGTGCGCTGATGGACAATAAAC
AAGAAGCTGAGAAGACTGAAGCACTACTCCTGAGAGTATTTGATTATGCATGGAACAAGC
TTCAGAATGGTGCTTGTCGCCGGCAAGAAATACTGCATAAGTTAGAACTGCGAGCAGCCA
ACCATAGGTCTCTACTTAGCAGAGTAAGTGACATGAAACAAAAAATATTTGGACAGAAAG
CAGGTATAAATATAAAGGGAAGTGGGCCAGCTAACACCTCGCCTAGCATAATTAAAAGTA
TGCTCCCAAGGGTTCGTACAATCGTTCGTTTCAGACCTCAGTTAGTAAACCCTAACAACA
GTGAAGGTGGGATAACTGGTATTCCCTATGCAAATAGACAAGCACATAGAAGGAAGTCCA
AAGGATACCAAGTAAAAAAGTTCGATGTTACAAAACGGAGAACTGTGCCGATACATGATT
CTAACTCTGTCTGTGGAGTGCTGCTGGAAGATGGTTTTTGTCTGGAGCACCCAGTTCATG
GAAGAAAGAGGTGCAGCTTACACAAAGGTAAAAGAGTCAAAGGCAGCCCAAAAAGTTCGC
CTACTAGCCATCCTTGCCAAGTTGGGATTGCAATTACTGAGTTTTGCCTAACTGAAGATT
TGGACAGCTCGGTCCCAAAACAGGAAAGCGAAATACGGCCCAAAAATATGTCTACAACTC
TGAAAGAACCTCAGAGGCAAAGCGATAATTTGGAATCACAAAAGGTGAATACTGGAGAAG
CTTCTACAGAAGATGGAACACAAGAAGTTTCTAGGGATGCTTGTATCTTAGAAGAGAAGG
CCTTCTTCCATGCTGACTCTGAGTCTCAGGAGCAGCAGCCTTCTGGGAGAATGTGGTTTG
AGCTGCTCAAATCACAGAGGAAACCGGCGAGCGCACATCCATCAAGAAGAGGCTTGGGAT
CTCAGATAACAGCAATGACAGATAACAGGTCCTGCAAAATGGTGTCAATTGCAGGAATGG
AAAGGACTGAGAAGGACAGTGGAGTAGAGGTCACTGCTGCTTCGTTTTCCAGAAGCTCAG
GATGGCCCTGTACCTGTGGCGCCCGTACGTCGGACGGTTCACGTTGTATGAATATGCCGA
TTGAAGGGAGGAAGAGATGTGCATTGCACAAAGGGCAAAGGGCAGCATTCCCCCCTACAC
CATCGGCATAATAGACAGGACGGGTTTTTTTCTTACTTCCAATTGTTGTTTTCACATTTC
TGTTAGCAAATTGAAACACAGAAAGCTGTTTTCATATTTCATGTGCCCCAAAACGACTAC
ATACATTTTGTAACTGTATTGCTCATCATTGAATTTTTCACATCAATTTTTAATGTTTTG
CGCTTCATA