Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021929_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:166016446:166018185:-1 gene:Zm00001d021929 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase2 description: geranylgeranyl pyrophosphate synthase2
Sequence	ATGGCCATGGCGTTTCACTTCCACCCGCTGGTCGCCTCGCGCGTCCACTTCTCTCCGCTC CCGTTCGCCGCCGCTACGGGGGCACCCTCCCCCTCTTCCTCCGTCGCCATCGCGGCGCAC TACCACCACCACGGCCGCCGCCGCTTCTCCGCCATCGTGGCCACGGCCACCACCACGGAG TTCAACTTCAAGGCATACATGGAGGAGCGCGCGGTCGCGGTGAACCGGGCGCTGGACGCG GCCATCCCCGCCGGGGGCCTCCCCGCGGCGCTGCACGACGCGATGCGGTACGCGCTGCTG GCGGGCGGGAAGCGCGTGCGCCCCGCGCTGTGCCTGGCCGCGTGCGCCGTGGTGGGCGGG CCGGAGTCCTGGGCGATGCCGGCCGCGGCGGCCGTCGAGATGGTGCACACCATGTCGCTC GTCCACGACGACCTACCCTGCATGGACGACGACGACCTCCGCCGCGGCAAGCCCACCTGC CACGTCGTCTACGGCGAGCCCATCGCGGTCCTCGCCGGGGACGCGCTGCTCTCGCTCTCC TTCCACCACATGGCCAGCGTCGGATCCTACCCTCCGGCCGTTGACCCGGAGAAGCACCCC GCCCGCGTCGTCCGAGCCATTGGCGAGCTCGCGCGCTGCATCGGATCGGAGGGACTCGTC GCCGGCCAGGTTGTGGATCTTGAGATGACAGGCACGTCTCAAACTGTGCCCCTTGAACTC CTCGAGTACATCCACCTCCACAAGACTGCTGCATTGCTCGAGGCCTCGGTCGTGATCGGG GCGATCATCGGAGGCGGCACGGACGAGCAAATCGAGGCGCTGCGGAAATACGCGAGGTCA ATCGGGCTGCTGTTCCAGGTGGTCGATGACATACTCGACGTCACCAAGTCGTCGGAGGAG CTAGGCAAGACGGCGGGGAAGGACCTGGCAAGTGACAAGACGACGTACCCTAAGCTACTG GGGCTAGCCAAGTCGCGGGAGTTTGCAGAGAAGTTGGTCTCTGACGCAACAGAGCAGCTC GCTTGCTTCGACGAGGAGAAGGCAGCACCCCTGTTGCACTTGGCCAACTATATCGCCCAC AGGCAGAACTGA

Peptide Sequence

PEP ID	Zm00001d021929_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:166016446:166018185:-1 gene:Zm00001d021929 transcript:Zm00001d021929_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase2 description: geranylgeranyl pyrophosphate synthase2
Sequence	MAMAFHFHPLVASRVHFSPLPFAAATGAPSPSSSVAIAAHYHHHGRRRFSAIVATATTTE FNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAACAVVGG PESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS FHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLEL LEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEE LGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLANYIAH RQN

Transcript Sequence

Transcript ID	Zm00001d021929_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:166016446:166018185:-1 gene:Zm00001d021929 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase2 description: geranylgeranyl pyrophosphate synthase2
Sequence	ACCACCGCCCGGGCGGCCACTCCACGTCTCCACTTGCCGTGCTGCACCGACGCGGCCAGC GCCAAAGCTTCTCTTCACCTCAAGAATTCAAGACAAGGCAGATCGCAACCTCTCGAGGCC ACCCCCAATCTCCAACGTTGCCGTCCCCCGCACTTTACCCCCAAGCCCAACCCAACTCGC CACCCATGGCCATGGCGTTTCACTTCCACCCGCTGGTCGCCTCGCGCGTCCACTTCTCTC CGCTCCCGTTCGCCGCCGCTACGGGGGCACCCTCCCCCTCTTCCTCCGTCGCCATCGCGG CGCACTACCACCACCACGGCCGCCGCCGCTTCTCCGCCATCGTGGCCACGGCCACCACCA CGGAGTTCAACTTCAAGGCATACATGGAGGAGCGCGCGGTCGCGGTGAACCGGGCGCTGG ACGCGGCCATCCCCGCCGGGGGCCTCCCCGCGGCGCTGCACGACGCGATGCGGTACGCGC TGCTGGCGGGCGGGAAGCGCGTGCGCCCCGCGCTGTGCCTGGCCGCGTGCGCCGTGGTGG GCGGGCCGGAGTCCTGGGCGATGCCGGCCGCGGCGGCCGTCGAGATGGTGCACACCATGT CGCTCGTCCACGACGACCTACCCTGCATGGACGACGACGACCTCCGCCGCGGCAAGCCCA CCTGCCACGTCGTCTACGGCGAGCCCATCGCGGTCCTCGCCGGGGACGCGCTGCTCTCGC TCTCCTTCCACCACATGGCCAGCGTCGGATCCTACCCTCCGGCCGTTGACCCGGAGAAGC ACCCCGCCCGCGTCGTCCGAGCCATTGGCGAGCTCGCGCGCTGCATCGGATCGGAGGGAC TCGTCGCCGGCCAGGTTGTGGATCTTGAGATGACAGGCACGTCTCAAACTGTGCCCCTTG AACTCCTCGAGTACATCCACCTCCACAAGACTGCTGCATTGCTCGAGGCCTCGGTCGTGA TCGGGGCGATCATCGGAGGCGGCACGGACGAGCAAATCGAGGCGCTGCGGAAATACGCGA GGTCAATCGGGCTGCTGTTCCAGGTGGTCGATGACATACTCGACGTCACCAAGTCGTCGG AGGAGCTAGGCAAGACGGCGGGGAAGGACCTGGCAAGTGACAAGACGACGTACCCTAAGC TACTGGGGCTAGCCAAGTCGCGGGAGTTTGCAGAGAAGTTGGTCTCTGACGCAACAGAGC AGCTCGCTTGCTTCGACGAGGAGAAGGCAGCACCCCTGTTGCACTTGGCCAACTATATCG CCCACAGGCAGAACTGAAGATTTGTGGTGATGCTTATTCTGTTCTTGCTCACTGTCGATC TGTAACATTGTATAAGGCAGTTGATATTGGTTCTGAGAAATATTTCCAAATCGTCATTTG GTGTATACTAGCTGTAGCTCTGTACCTTGATGTAATGAGGCTGTTATATTTTTTTTCTCC ATTGAAGAATGCAAATAAATATGGAAGAATTGTACAC