Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021909_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:165775781:165777019:-1 gene:Zm00001d021909 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	ATGCCGGAGCGGCGCATCGTGCCGGTTCCCGCGACGTCCGACATCGGCGTTCTGCCCATG GACGCCCTGCGCGAGATTCTACTGCGCCTCCAGGCCAAGGAGCTCTGCCGCCTCCGCCTG GTCTGCCGTCTGTGGCGGTCCCTCCTCTCCGACCCGCACTTCGCCGCGCCCCACTACGCG CGGCATCGGGCGGTGCTCATCATCGCCGCCTACAAGGACGACGCGGGGCGCGACGTGCTC GTGGACATCATGGATCTCTCCGGGCAAATCGTGAAGAAGGTGCCCACAATGGAGGGCGAC AGAGCCGCCGTGAGGGGCGGGGGGACCCTTGACCGCGTCTGTGTTAGGAAAATCGACGAC AGCCGCAGCAGCTACCGAGTGTTCAACCCGATTCGCGAGGAAGTGTACTACTTACCGGAC AGATTATTCGATCCGGCTACTGGAGCTGTGTACCGCATACCAGACAGCTACGCAGAAGAG CATGTGGAGCTCGCTTCGAGCTTGATCACCGAGCCCAAGTATCTGTTTGGACAGGTCGCC CGGACAGGAGAGTGCAAGATGTTTCGAATGCTATTCCATTTTTCCGTTGGCATTGGAGGT CGGGGGATGTTTGAGGTCTGCACGCTCAACTCCGATAACAGTAGCAGCCGGGCAGCAGGG TGGAGGAGAGCCGCGCCCCTTGAAAAAGGCATTCAGATTAGTAGGTTTACCAGTGTGGTA ATCGATGGGGTTGTCTACTGCCTTTGCTTTGGTCCACACCATTCTATCACCTTCGACAAC CGAGTTACCGAGCAAGATTTGATATTTACATTCGACCTTGAGACTGAGGCATGGGGACCG TCAATCCGGGGGCCCCCGATCACCTTCCCTGATGACGCTGATCTCATGTTCTACTACCTT GGTCTTCCTAATGTAAAGCAACTGACAATAGCCAACCTGAATCGCTCCTTGGCTGTTGTG CATGGCCCAGCTCCGTATGTTGATGTTTGGATTCTACTGGACTTTGCAAAGGGTCTCTGG GTCAAAATGTACAGCATACAGTTTGAGAAATACACCATTCTTAAGCCCGTGCATCCCTTG TTTGTGTTTGGCGACGGGAGGATCATCCTGTATAAACAAGACCATGATTACCTGCAGATT TATGATCCAAGAACCAACACACTTGCTGATTTACTGGAGTCAAAGCATTTCTCTGCAGTT GCTAGGTACACAGGAAACCTACTGAGCTTAGAGCGCTGA

Peptide Sequence

PEP ID	Zm00001d021909_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:165775781:165777019:-1 gene:Zm00001d021909 transcript:Zm00001d021909_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	MPERRIVPVPATSDIGVLPMDALREILLRLQAKELCRLRLVCRLWRSLLSDPHFAAPHYA RHRAVLIIAAYKDDAGRDVLVDIMDLSGQIVKKVPTMEGDRAAVRGGGTLDRVCVRKIDD SRSSYRVFNPIREEVYYLPDRLFDPATGAVYRIPDSYAEEHVELASSLITEPKYLFGQVA RTGECKMFRMLFHFSVGIGGRGMFEVCTLNSDNSSSRAAGWRRAAPLEKGIQISRFTSVV IDGVVYCLCFGPHHSITFDNRVTEQDLIFTFDLETEAWGPSIRGPPITFPDDADLMFYYL GLPNVKQLTIANLNRSLAVVHGPAPYVDVWILLDFAKGLWVKMYSIQFEKYTILKPVHPL FVFGDGRIILYKQDHDYLQIYDPRTNTLADLLESKHFSAVARYTGNLLSLER

Transcript Sequence

Transcript ID	Zm00001d021909_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:165775781:165777019:-1 gene:Zm00001d021909 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	ATGCCGGAGCGGCGCATCGTGCCGGTTCCCGCGACGTCCGACATCGGCGTTCTGCCCATG GACGCCCTGCGCGAGATTCTACTGCGCCTCCAGGCCAAGGAGCTCTGCCGCCTCCGCCTG GTCTGCCGTCTGTGGCGGTCCCTCCTCTCCGACCCGCACTTCGCCGCGCCCCACTACGCG CGGCATCGGGCGGTGCTCATCATCGCCGCCTACAAGGACGACGCGGGGCGCGACGTGCTC GTGGACATCATGGATCTCTCCGGGCAAATCGTGAAGAAGGTGCCCACAATGGAGGGCGAC AGAGCCGCCGTGAGGGGCGGGGGGACCCTTGACCGCGTCTGTGTTAGGAAAATCGACGAC AGCCGCAGCAGCTACCGAGTGTTCAACCCGATTCGCGAGGAAGTGTACTACTTACCGGAC AGATTATTCGATCCGGCTACTGGAGCTGTGTACCGCATACCAGACAGCTACGCAGAAGAG CATGTGGAGCTCGCTTCGAGCTTGATCACCGAGCCCAAGTATCTGTTTGGACAGGTCGCC CGGACAGGAGAGTGCAAGATGTTTCGAATGCTATTCCATTTTTCCGTTGGCATTGGAGGT CGGGGGATGTTTGAGGTCTGCACGCTCAACTCCGATAACAGTAGCAGCCGGGCAGCAGGG TGGAGGAGAGCCGCGCCCCTTGAAAAAGGCATTCAGATTAGTAGGTTTACCAGTGTGGTA ATCGATGGGGTTGTCTACTGCCTTTGCTTTGGTCCACACCATTCTATCACCTTCGACAAC CGAGTTACCGAGCAAGATTTGATATTTACATTCGACCTTGAGACTGAGGCATGGGGACCG TCAATCCGGGGGCCCCCGATCACCTTCCCTGATGACGCTGATCTCATGTTCTACTACCTT GGTCTTCCTAATGTAAAGCAACTGACAATAGCCAACCTGAATCGCTCCTTGGCTGTTGTG CATGGCCCAGCTCCGTATGTTGATGTTTGGATTCTACTGGACTTTGCAAAGGGTCTCTGG GTCAAAATGTACAGCATACAGTTTGAGAAATACACCATTCTTAAGCCCGTGCATCCCTTG TTTGTGTTTGGCGACGGGAGGATCATCCTGTATAAACAAGACCATGATTACCTGCAGATT TATGATCCAAGAACCAACACACTTGCTGATTTACTGGAGTCAAAGCATTTCTCTGCAGTT GCTAGGTACACAGGAAACCTACTGAGCTTAGAGCGCTGA