Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021893_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:7:165532514:165541509:-1 gene:Zm00001d021893 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

ATGAGTGTTGTTATGCCTCCACTGCTTCAGTCTGCTCAACTCAAGCCTGATGTTACAGTT
ACTTCAGCTGAATCAGATGACGATATTGCATCAGATGACGATAGCATTGAAACAATTACA
CTTGGTGACAAAAGAATAGGAATTCGAACTAGTGTGCTGGAAGAGAAAGCAACAGCTTGC
AACATGCTGTGCTGTTATGCTGATGAGCTTAAGGAGGGTTTCTTCCCATGGATTGATCAG
GTTGCCCCAACGTTGGTTCCTCTGCTGAAGTTTTACTTCCATGAGGAAGTCAGGAGAGCT
GCTGTTGCGGCCATGCCGGAACTTCTACGCTCAGCAAAATTGGCTGTTGAGAAAGGGCAG
GCTCAAGGACGTGATGAGTCTTATGTCAAACAGTTGTCTGACTACATAATTGCAGCACTT
GTTGAAGCACTGCACAAGGAGCCAGAAACAGAAATGTGCTCATCCATGCTGGATTCTTTA
AACGAGTGTATGCAGCTTTCGGGTCTTTTGCTTGATGAAGCCCAAGTACGAGCTATCATA
GATGAGATTAAAAACGTCATTATAGCCAGTGCCACCCGGAAAAGAGAACGCTCGGAGAGA
ACAAAAGCGGAAGATTTTGATGCTGATGAAGGAGAGCTACTCAAAGAAGAGAATGAACAG
GAGGAGGAAGTATTTGATCAGGTCAGTGAGTGCCTAGGGACTTTGATTAAAACCTTCAAA
GGTTCTTTCTTGCCGTTTTTTGAAGAGCTCTCTATGTACATTACACCAATGTTGGGAAAA
GATAAAACACCTGAAGAGAGAAGGATAGCTATCTGTATTTTTGATGATGTTGCAGAGCAA
TGCCGTGAATCAGCTCTGAAGTATTATGACACATACCTTCCTTTCCTTTTGGAGGCATCA
AACGATGAAAATTCAGATGTTCGGCAGGCTGCTGTCTATGGTGTGGGTGTATGTGCCGAG
TTTGGTGGTCATGTTTTTCGCCCTCTAGTAGGAGAGGCCTTATCAAAATTAAACAATGTT
ATAAGGCATCCTGATGCACGACTTCCTGATAATATCATGGCATATGACAATGCTGTTTCG
GCGCTTGGAAAAATATGCCAATTTCATCGGGATGGTATTGATGCAGCTCAGGTTGTTCCA
GCCTGGCTTAGCTGCTTGCCTATAAAAGACGACAAGGTTGAAGCTAAAGTTGTACATGGA
CAGCTTTGCTCCATGGTGGAGAGGTCGGATGCTGAAATTCTTGGGCCTCACAGTCAGTAT
CTTCCTAAAATTGTTTCAATTTTTGCAGAGGTTTTGTGCAATGGAACAGAACTTGCCACT
GATGAAACTAGAAACAGGATGGTGAATGTCTTGAGGCGTTTCCAGCAGACTTTGCCTCCT
GATTTTCTTGCATCGACGTTTTCCAACTTGCAACCGCAGCAACAGCTACTGCTACAGTCC
ATCTTGTCGACATAG

Peptide Sequence

PEP ID

Zm00001d021893_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:7:165532514:165541509:-1 gene:Zm00001d021893 transcript:Zm00001d021893_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

MSVVMPPLLQSAQLKPDVTVTSAESDDDIASDDDSIETITLGDKRIGIRTSVLEEKATAC
NMLCCYADELKEGFFPWIDQVAPTLVPLLKFYFHEEVRRAAVAAMPELLRSAKLAVEKGQ
AQGRDESYVKQLSDYIIAALVEALHKEPETEMCSSMLDSLNECMQLSGLLLDEAQVRAII
DEIKNVIIASATRKRERSERTKAEDFDADEGELLKEENEQEEEVFDQVSECLGTLIKTFK
GSFLPFFEELSMYITPMLGKDKTPEERRIAICIFDDVAEQCRESALKYYDTYLPFLLEAS
NDENSDVRQAAVYGVGVCAEFGGHVFRPLVGEALSKLNNVIRHPDARLPDNIMAYDNAVS
ALGKICQFHRDGIDAAQVVPAWLSCLPIKDDKVEAKVVHGQLCSMVERSDAEILGPHSQY
LPKIVSIFAEVLCNGTELATDETRNRMVNVLRRFQQTLPPDFLASTFSNLQPQQQLLLQS
ILST

Transcript Sequence

Transcript ID

Zm00001d021893_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:165532514:165541509:-1 gene:Zm00001d021893 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

CAGCTGGAAGATGGGACCAGACACTTGGCGGTGGAGTTTGTGATTACTCTAGCTGAGGCT
AGAGAGCGTGCACCAGGAATGATGCGGCGACTCCCGCAGTTTGTTGGTAGGCTGTTTGCA
GTGCTGATGCAGATGCTGCTTGATGTCGAGGATGACCCTGCTTGGCACTCTGCTGAAACT
GAAGATGAGGACGCAGGGGAAGGGAACAACTATGGAGTGGCGCAGGAGTGCCTTGACCGC
CTTTCCATCGCCATTGGTGGGAACGCAATTGTACCAATTGCTTCTGAGCTGCTACCACAG
TACCTGTCTTCTGCTGAGTGGCAGAAGCACCATGCTGCGCTCATTACACTTGCACAGATT
GCGGAAGGATGTGCAAAGGTTATGCTTAAAAATTTGGAACAAGTCGTTTCGATGATATTG
AATGGATTTCAACATCCCCACCCACGTGTGAGATGGGCTGCTATCAATGCCATCGGTCAG
CTTTCTACGGATTTGGGCCCAGATCTTCAAGTTCATTACCACCAGCAGGTGCTGCCTGCA
TTGGCCAATGCTATGGATGATTTCCAGAATCCACGAGTTCAGGCACATGCTGCTTCAGCG
ATTTTGAATTTTAGTGAGAATTGTACACCGGAAATTTTGACGCCTTACCTGGATGGAATT
GTGAACAAATTACTTGTTCTTCTTCAGAATGGAAAGCAAATGGTGCAGGAGGGAGCATTG
ACAGCTTTAGCGTCAGTAGCAGATTCATCACAGGATCACTTCAAGAAATACTATGATGCT
GTCATGCCATACCTAAAATCTATCTTGATGCATGCAACTGATAAGTCCAATAGGATGCTC
CGTGCCAAGTCCATGGAGTGTATAAGTTTGGTAGGAATGGCTGTGGGTAAGGACAAGTTC
AGAGACGACGCAAGGCAGGTTATGGAAGTACTTATGGCTTTGCAAGGAGCTCCAATGGAA
ACTGATGATCCAATTACCAGCTACATGTTGCAGGTTATAGGCTTGGGCTAGGCTATGCAA
ATGTCTTGGACAGGATTTCCTTCCTTACATGAGTGTTGTTATGCCTCCACTGCTTCAGTC
TGCTCAACTCAAGCCTGATGTTACAGTTACTTCAGCTGAATCAGATGACGATATTGCATC
AGATGACGATAGCATTGAAACAATTACACTTGGTGACAAAAGAATAGGAATTCGAACTAG
TGTGCTGGAAGAGAAAGCAACAGCTTGCAACATGCTGTGCTGTTATGCTGATGAGCTTAA
GGAGGGTTTCTTCCCATGGATTGATCAGGTTGCCCCAACGTTGGTTCCTCTGCTGAAGTT
TTACTTCCATGAGGAAGTCAGGAGAGCTGCTGTTGCGGCCATGCCGGAACTTCTACGCTC
AGCAAAATTGGCTGTTGAGAAAGGGCAGGCTCAAGGACGTGATGAGTCTTATGTCAAACA
GTTGTCTGACTACATAATTGCAGCACTTGTTGAAGCACTGCACAAGGAGCCAGAAACAGA
AATGTGCTCATCCATGCTGGATTCTTTAAACGAGTGTATGCAGCTTTCGGGTCTTTTGCT
TGATGAAGCCCAAGTACGAGCTATCATAGATGAGATTAAAAACGTCATTATAGCCAGTGC
CACCCGGAAAAGAGAACGCTCGGAGAGAACAAAAGCGGAAGATTTTGATGCTGATGAAGG
AGAGCTACTCAAAGAAGAGAATGAACAGGAGGAGGAAGTATTTGATCAGGTCAGTGAGTG
CCTAGGGACTTTGATTAAAACCTTCAAAGGTTCTTTCTTGCCGTTTTTTGAAGAGCTCTC
TATGTACATTACACCAATGTTGGGAAAAGATAAAACACCTGAAGAGAGAAGGATAGCTAT
CTGTATTTTTGATGATGTTGCAGAGCAATGCCGTGAATCAGCTCTGAAGTATTATGACAC
ATACCTTCCTTTCCTTTTGGAGGCATCAAACGATGAAAATTCAGATGTTCGGCAGGCTGC
TGTCTATGGTGTGGGTGTATGTGCCGAGTTTGGTGGTCATGTTTTTCGCCCTCTAGTAGG
AGAGGCCTTATCAAAATTAAACAATGTTATAAGGCATCCTGATGCACGACTTCCTGATAA
TATCATGGCATATGACAATGCTGTTTCGGCGCTTGGAAAAATATGCCAATTTCATCGGGA
TGGTATTGATGCAGCTCAGGTTGTTCCAGCCTGGCTTAGCTGCTTGCCTATAAAAGACGA
CAAGGTTGAAGCTAAAGTTGTACATGGACAGCTTTGCTCCATGGTGGAGAGGTCGGATGC
TGAAATTCTTGGGCCTCACAGTCAGTATCTTCCTAAAATTGTTTCAATTTTTGCAGAGGT
TTTGTGCAATGGAACAGAACTTGCCACTGATGAAACTAGAAACAGGATGGTGAATGTCTT
GAGGCGTTTCCAGCAGACTTTGCCTCCTGATTTTCTTGCATCGACGTTTTCCAACTTGCA
ACCGCAGCAACAGCTACTGCTACAGTCCATCTTGTCGACATAGTTGTTTTTTCTGTCGCT
GCAAGGTGGGGGTTTGTTATTTTTCTTGATGTTTTATCAGCCAATTCTTTATGTCGTATC
TTTTTCTGGTGGGGTACTTTGTGAATGCATTGTTTGCTTCAACGAACTGGAGGCTGTCAC
CACACATGGTTTTGATAGAGTGTATATTGTCTGTCTTGTATT