Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021858_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:7:164639322:164644072:-1 gene:Zm00001d021858 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TIME FOR COFFEE
Sequence	ATGGCTCCCCCTCCTGGGAAGCTATCTGATGATATAGATGGCTCCTCCGACCCTGATGCA GATAAGAAGGGATTGGATTCTGAGATGGACATGTTGGGGAGAGGAAATTCGGAAAAGAAG GCTAGTGAAAGGACTCGGAGAGGACTGGATATTGATTTGGAGGACCAGAAGGTGCGAAGA ATTCCAGTCGATGAGTTCGCGCCGAAGAAGCTCACACTGCAGTTGGATTTGGAGAAGCCC AGTCTCGGTGATGAAAAGTCGCCATCAGAGAGACGGCAGCCGCAGCCGCAGCCACAACAA TTGCAGCAGCAGAAGCCCTCAAAGGCTGAGATAAAGCACGAGAAATCTGCTATGCCTGCT GCTGTTACACCACCTATGCCTATACCTGTTGGAGGCTGGCTTGGGAATTTCCCACCGTTT GGTTATCTCAGTCCAGTCCCAGGCCTATCAGCAGCTGGTCTTCATCATCCCATGGACGTG AAACCAGGGTCATCTAGTGGATTACATCATTCTGCATTGCTTCCACCGCCAACACGCTCA AAGAGATGTGCTACACATTGCTACATTGCACAATTTATCCAGCACCAGCAGCGAGTTGCA AAGATGAACTCTTTCTGGCCGCCAACTGCTGCTGCTGCAGCCGCCGCCGCCGCCAATAGA CCACCGGGGCCATTCTTTGGTGCAAGGCCATTCAGCATGGGTGTTGTGCCACCCACGGAT GCCGCCTCTATGCTTGTGAACCCAATGCAGGGAAGCTACCCTGTTAGGGCGCACACTCCG ATGCAAGAAGCAAAGGCTCCTATGGCTACATCACCATTCCAGGGGAGTCTCTCGAAGGAC AAAACACTAGGCAATGCTGCTGGTGCTGAATCAAGCCAGAGGAAACAACCACCTTCTCAT GAAACACTGCAGTCCACTCCCTTGCCAAACATGCTGCAAGCCCCGGCATTCATCTTTCCA TTCAATCAGCAGCATGCTATGGTGGCAGCTGCAAATGCTGCCAACCGAGCAGGGGATGCA AAATCATCTGGTGCCGGCAATACATTGCCGCCATCTGCCAGTGCTCACACTTTGGCAACA AACTCTGGTGCCGCGGCCATGAACTTGAGCTTTGCCAACATGCAACCGGCTGATGCCCAG TTTTTGGCAATCTTACAGAATGGATACCCGTTCCAGGTTGCTGCCCATCCTGGAGGGCCT CCATATCGAGGCATGGCATCGCCAGGCCCAGCTGTTCCATTCTTCAATGGTCATGTGTAT TCCTCCCCCATGCTGCACCCATCACAGCAGCAAGGTGCGCAGTCACAAAGTCATCAGAAG ACCCAAATGCCAAACTTGCCCAGTTCATCACAGAAGCATCAGCCACAACAGTCCCAAGGC CTGTTGGGATACGCACCAAATACTAATGCAGCAGCAGCTGCTAGTAATTCACAGAATTAT TCAAGTGGCAATCAGCGCCCTGTCCTGCTACCTGGCCTTGTGCACCGACAGGAGAGTGAC AAAACTGGACAAGATTGTCCATCTAGTGATGACAAGCCATCTCACTCCCAGAAGAGTGGG TATGAACACAATTTTGCCGTTCCAGTCCATCTACCGAATTTTGCAATGATGCCAGCCGCT CAACCTGCTGTCAGTCAGAGTGAGAAGAAGTTAAGTGACCACCAGCACCACCAGCAACAG CAGCAGCCACAAGTCAGCCGAGGCCAGGGTGTGAGGATTGATCTTGCCTCTTCTCAGCCT TTTGTGATGCCCTTTGGCTCCATTGGTCCTCCTGGATCTACCCCAAGTGGTCTTGACTTT TCGGCATTGGCGCAGAACCATGCAGTTTTCCAGAGCCATCAAGATGCAGCAAGGCATGGT TATCCCCAGCTTAATTTTGCTGCAGCTCAACCTGTGCAATCCACGCAGCAGAAGCCCCAG CACCAAATGACTGGAGAAACAAAAACTGTTGCGGGGGATTCATCCTCGACTCCCATTGCT GGAGACAGTGAGAGAAAGAAATCAACTTCTCACAAGTATTCTAGTGATTCACAACAGCAT TCGCTGTCCTTCACCAGGACGGAAAGCAAGAATTATGTGCCTCCTTTCCTTACTGGCAAC ACAAATGAAACTTCGTCCCGCACCCTGAGCCTTATCGGAACAGAATCTTCAAATGCATTC ATGGGAAGCAAACCCACAAATTCCAACACCCCTGCCTCTACCGCCGCTGCAGCTTCGGCC AGCATTTCTCAGCAGCAGCAGCAGCACCTTCAGATGCAAGCGCAACAAAAGCACCAGCAG CATCAGCAGCTAATTCAGCATCACCATCTGAATCGGCCCAGATCTGCTGCACCAAGTACA CAGAACAGTGCAGGTGGGTACCAAGACCGTATAAACATGGCTAATTTTCAGAATATGATG TACCCATCAAGTGCTGCCCAAGGGAGAGTTCAATCCCCCCAGTTGAAGGCATCCTCAGGG AGAGGGACACCTTCATCTACTGCTACGACTACCCCTGCCGCCACACCCCCTAATTTGATT ATGATGAAGAACAGTAGCCTCCACCAGCAACAAGCAAAAGTCCCTATGCAGGCTCTCTAC ACTCCTGGTCACCAATCACAGACTTCCTTAAGTTCATCAAAGGTAGGACCTTCTCTAACA AACCTTTCTACCGGAGGAGGGGATCTATCTCGATCTTCAAACGCCCCTGTTGCTTCTGGT TCACCATCCAATTCGGTGTCCAAAAGTACCGGTGGCAGCCCACCCGCCACAGGAAATGCA AAGGGTGTTCAGCAGCCTGTCCAACTGCCATCACCACAGCAGCAGTCAGCCAAGAACTCC GCGTCGACGTCTGGCTCCAGGACTACTCCCACGAATCATTTCAGTATGGCC

Peptide Sequence

PEP ID	Zm00001d021858_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:7:164639322:164644072:-1 gene:Zm00001d021858 transcript:Zm00001d021858_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TIME FOR COFFEE
Sequence	MAPPPGKLSDDIDGSSDPDADKKGLDSEMDMLGRGNSEKKASERTRRGLDIDLEDQKVRR IPVDEFAPKKLTLQLDLEKPSLGDEKSPSERRQPQPQPQQLQQQKPSKAEIKHEKSAMPA AVTPPMPIPVGGWLGNFPPFGYLSPVPGLSAAGLHHPMDVKPGSSSGLHHSALLPPPTRS KRCATHCYIAQFIQHQQRVAKMNSFWPPTAAAAAAAAANRPPGPFFGARPFSMGVVPPTD AASMLVNPMQGSYPVRAHTPMQEAKAPMATSPFQGSLSKDKTLGNAAGAESSQRKQPPSH ETLQSTPLPNMLQAPAFIFPFNQQHAMVAAANAANRAGDAKSSGAGNTLPPSASAHTLAT NSGAAAMNLSFANMQPADAQFLAILQNGYPFQVAAHPGGPPYRGMASPGPAVPFFNGHVY SSPMLHPSQQQGAQSQSHQKTQMPNLPSSSQKHQPQQSQGLLGYAPNTNAAAAASNSQNY SSGNQRPVLLPGLVHRQESDKTGQDCPSSDDKPSHSQKSGYEHNFAVPVHLPNFAMMPAA QPAVSQSEKKLSDHQHHQQQQQPQVSRGQGVRIDLASSQPFVMPFGSIGPPGSTPSGLDF SALAQNHAVFQSHQDAARHGYPQLNFAAAQPVQSTQQKPQHQMTGETKTVAGDSSSTPIA GDSERKKSTSHKYSSDSQQHSLSFTRTESKNYVPPFLTGNTNETSSRTLSLIGTESSNAF MGSKPTNSNTPASTAAAASASISQQQQQHLQMQAQQKHQQHQQLIQHHHLNRPRSAAPST QNSAGGYQDRINMANFQNMMYPSSAAQGRVQSPQLKASSGRGTPSSTATTTPAATPPNLI MMKNSSLHQQQAKVPMQALYTPGHQSQTSLSSSKVGPSLTNLSTGGGDLSRSSNAPVASG SPSNSVSKSTGGSPPATGNAKGVQQPVQLPSPQQQSAKNSASTSGSRTTPTNHFSMA

Transcript Sequence

Transcript ID	Zm00001d021858_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:164639322:164644072:-1 gene:Zm00001d021858 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TIME FOR COFFEE
Sequence	GGCGGTGGAACCAGTGGAGGCAGCTCCGGCGTAGGAGATGGCTCGCAGATTTCGAAGTCT CCATCTTTTATCCAAGAGGAGATTGAGGTCGCTGAGGTGCTGTTCGGGCTCACCAGGCAG TTCCCATGCCCGCAAAAGCAGGAGAGCAACCACAAACTCGAGCCTAGGGACGCGCCCGAG GCCAAGTCTGGGAACTCTTCGCCGGCCCCCTCGTCTTCTGGCGTCCGACCGTCGGATTCC ACCTCCCTTTCCACCATAGCTCCAAAGAGGAAGAGACCACGGCTGGTAAATTACGACGAA GATAGCCGTCCGGCGAGACCAGAGTTGGCAGAGCCGTCATCAAACCCGGAGTCACCTCCT GTGGCAAGATCAGAAGCGAAGACAACAGCAACATCGGCAGCAGCAGAAAGCGGCACCAGC ACCACCCCTGCGGCTGCCCAACCTGAGACTTCACGAGAGTCAGAGAAGGCGGAGGACCGT GGTAGAAACAGAGACTCAGAGCTCCGGCCCAACGAATCAGATCGGCGAGATCACAGGTTG GAGAGCCAGGCTGTGCCGCCGTCGCCGTTGCCGTTGCCGTTGCCAGAGCCTCCAGTCAAG CCGGATGCTGAAGCAAAGCCGGTGGGCTCCGAGGCCAGGAACGGCGAAGCTACTGCCACG ACAAAGATTGAGCTGGCATCGGATGGCGCTCGGCATGACAAGAGGTTTTCCATTGATCTC ATGGCTCCCCCTCCTGGGAAGCTATCTGATGATATAGATGGCTCCTCCGACCCTGATGCA GATAAGAAGGGATTGGATTCTGAGATGGACATGTTGGGGAGAGGAAATTCGGAAAAGAAG GCTAGTGAAAGGACTCGGAGAGGACTGGATATTGATTTGGAGGACCAGAAGGTGCGAAGA ATTCCAGTCGATGAGTTCGCGCCGAAGAAGCTCACACTGCAGTTGGATTTGGAGAAGCCC AGTCTCGGTGATGAAAAGTCGCCATCAGAGAGACGGCAGCCGCAGCCGCAGCCACAACAA TTGCAGCAGCAGAAGCCCTCAAAGGCTGAGATAAAGCACGAGAAATCTGCTATGCCTGCT GCTGTTACACCACCTATGCCTATACCTGTTGGAGGCTGGCTTGGGAATTTCCCACCGTTT GGTTATCTCAGTCCAGTCCCAGGCCTATCAGCAGCTGGTCTTCATCATCCCATGGACGTG AAACCAGGGTCATCTAGTGGATTACATCATTCTGCATTGCTTCCACCGCCAACACGCTCA AAGAGATGTGCTACACATTGCTACATTGCACAATTTATCCAGCACCAGCAGCGAGTTGCA AAGATGAACTCTTTCTGGCCGCCAACTGCTGCTGCTGCAGCCGCCGCCGCCGCCAATAGA CCACCGGGGCCATTCTTTGGTGCAAGGCCATTCAGCATGGGTGTTGTGCCACCCACGGAT GCCGCCTCTATGCTTGTGAACCCAATGCAGGGAAGCTACCCTGTTAGGGCGCACACTCCG ATGCAAGAAGCAAAGGCTCCTATGGCTACATCACCATTCCAGGGGAGTCTCTCGAAGGAC AAAACACTAGGCAATGCTGCTGGTGCTGAATCAAGCCAGAGGAAACAACCACCTTCTCAT GAAACACTGCAGTCCACTCCCTTGCCAAACATGCTGCAAGCCCCGGCATTCATCTTTCCA TTCAATCAGCAGCATGCTATGGTGGCAGCTGCAAATGCTGCCAACCGAGCAGGGGATGCA AAATCATCTGGTGCCGGCAATACATTGCCGCCATCTGCCAGTGCTCACACTTTGGCAACA AACTCTGGTGCCGCGGCCATGAACTTGAGCTTTGCCAACATGCAACCGGCTGATGCCCAG TTTTTGGCAATCTTACAGAATGGATACCCGTTCCAGGTTGCTGCCCATCCTGGAGGGCCT CCATATCGAGGCATGGCATCGCCAGGCCCAGCTGTTCCATTCTTCAATGGTCATGTGTAT TCCTCCCCCATGCTGCACCCATCACAGCAGCAAGGTGCGCAGTCACAAAGTCATCAGAAG ACCCAAATGCCAAACTTGCCCAGTTCATCACAGAAGCATCAGCCACAACAGTCCCAAGGC CTGTTGGGATACGCACCAAATACTAATGCAGCAGCAGCTGCTAGTAATTCACAGAATTAT TCAAGTGGCAATCAGCGCCCTGTCCTGCTACCTGGCCTTGTGCACCGACAGGAGAGTGAC AAAACTGGACAAGATTGTCCATCTAGTGATGACAAGCCATCTCACTCCCAGAAGAGTGGG TATGAACACAATTTTGCCGTTCCAGTCCATCTACCGAATTTTGCAATGATGCCAGCCGCT CAACCTGCTGTCAGTCAGAGTGAGAAGAAGTTAAGTGACCACCAGCACCACCAGCAACAG CAGCAGCCACAAGTCAGCCGAGGCCAGGGTGTGAGGATTGATCTTGCCTCTTCTCAGCCT TTTGTGATGCCCTTTGGCTCCATTGGTCCTCCTGGATCTACCCCAAGTGGTCTTGACTTT TCGGCATTGGCGCAGAACCATGCAGTTTTCCAGAGCCATCAAGATGCAGCAAGGCATGGT TATCCCCAGCTTAATTTTGCTGCAGCTCAACCTGTGCAATCCACGCAGCAGAAGCCCCAG CACCAAATGACTGGAGAAACAAAAACTGTTGCGGGGGATTCATCCTCGACTCCCATTGCT GGAGACAGTGAGAGAAAGAAATCAACTTCTCACAAGTATTCTAGTGATTCACAACAGCAT TCGCTGTCCTTCACCAGGACGGAAAGCAAGAATTATGTGCCTCCTTTCCTTACTGGCAAC ACAAATGAAACTTCGTCCCGCACCCTGAGCCTTATCGGAACAGAATCTTCAAATGCATTC ATGGGAAGCAAACCCACAAATTCCAACACCCCTGCCTCTACCGCCGCTGCAGCTTCGGCC AGCATTTCTCAGCAGCAGCAGCAGCACCTTCAGATGCAAGCGCAACAAAAGCACCAGCAG CATCAGCAGCTAATTCAGCATCACCATCTGAATCGGCCCAGATCTGCTGCACCAAGTACA CAGAACAGTGCAGGTGGGTACCAAGACCGTATAAACATGGCTAATTTTCAGAATATGATG TACCCATCAAGTGCTGCCCAAGGGAGAGTTCAATCCCCCCAGTTGAAGGCATCCTCAGGG AGAGGGACACCTTCATCTACTGCTACGACTACCCCTGCCGCCACACCCCCTAATTTGATT ATGATGAAGAACAGTAGCCTCCACCAGCAACAAGCAAAAGTCCCTATGCAGGCTCTCTAC ACTCCTGGTCACCAATCACAGACTTCCTTAAGTTCATCAAAGGTAGGACCTTCTCTAACA AACCTTTCTACCGGAGGAGGGGATCTATCTCGATCTTCAAACGCCCCTGTTGCTTCTGGT TCACCATCCAATTCGGTGTCCAAAAGTACCGGTGGCAGCCCACCCGCCACAGGAAATGCA AAGGGTGTTCAGCAGCCTGTCCAACTGCCATCACCACAGCAGCAGTCAGCCAAGAACTCC GCGTCGACGTCTGGCTCCAGGACTACTCCCACGAATCATTTCAGTATGGCC