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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021817_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:7:163565568:163566817:-1 gene:Zm00001d021817 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 1
Sequence

ATGCCGCTGAAGCTCATGTCCGCGGTGCGCGCGTCCAAGGCTGGCTTGGATATGCCCGCC
GCCGCGTGGAGGAAGGCCTTCGCGCGCGCCTACAAGACCATGGACAAGGACCTTCGCTCC
CACGCCACCCTAGATTGCTTCTGCAGTGGCAGCACCGCCGTCACCGTACTCAAGCTCGGC
TCGGATCTCTACATGGCCAACATTGGTGACTCACGCGCCGTCCTTGGCTCGAGGGATGGT
GGCGACGGCGGCATGGTGGCCTTGCAACTGACTATTGACCTCAAACCGGATGTTCCCAGC
GAGGCAGAACGGATCAAGAAGTGCAGGGGCAGAGTATTTGCTCTGCAGGACGAACCGGAG
GTGCCGCGGGTCTGGCTGCCGTTCGATGACGCGCCAGGCCTGGCAATGGCCCGGGCCTTT
GGGGACTTCTGCCTCAAGGATTATGGTGTCATTTCGGTTCCAGAGTTCTTCCACTGGTCG
CTCACAGAGAAGGATCAGTTTGTCATCCTTGCATCAGATGGGATAATGATTAGCCAG

Peptide Sequence

PEP ID

Zm00001d021817_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:7:163565568:163566817:-1 gene:Zm00001d021817 transcript:Zm00001d021817_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 1
Sequence

MPLKLMSAVRASKAGLDMPAAAWRKAFARAYKTMDKDLRSHATLDCFCSGSTAVTVLKLG
SDLYMANIGDSRAVLGSRDGGDGGMVALQLTIDLKPDVPSEAERIKKCRGRVFALQDEPE
VPRVWLPFDDAPGLAMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGIMISQ

Transcript Sequence

Transcript ID

Zm00001d021817_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:163565568:163566817:-1 gene:Zm00001d021817 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 1
Sequence

GGCAGGGGTTCGGCGGGGAGGAAGACGTCGTGCTTTGTGGGGTGTTCGACGGGCACGGCC
CGCATGGCCACCTGGTGGCGCGCAGAGTCCGCGATGCGATGCCGCTGAAGCTCATGTCCG
CGGTGCGCGCGTCCAAGGCTGGCTTGGATATGCCCGCCGCCGCGTGGAGGAAGGCCTTCG
CGCGCGCCTACAAGACCATGGACAAGGACCTTCGCTCCCACGCCACCCTAGATTGCTTCT
GCAGTGGCAGCACCGCCGTCACCGTACTCAAGCTCGGCTCGGATCTCTACATGGCCAACA
TTGGTGACTCACGCGCCGTCCTTGGCTCGAGGGATGGTGGCGACGGCGGCATGGTGGCCT
TGCAACTGACTATTGACCTCAAACCGGATGTTCCCAGCGAGGCAGAACGGATCAAGAAGT
GCAGGGGCAGAGTATTTGCTCTGCAGGACGAACCGGAGGTGCCGCGGGTCTGGCTGCCGT
TCGATGACGCGCCAGGCCTGGCAATGGCCCGGGCCTTTGGGGACTTCTGCCTCAAGGATT
ATGGTGTCATTTCGGTTCCAGAGTTCTTCCACTGGTCGCTCACAGAGAAGGATCAGTTTG
TCATCCTTGCATCAGATGGGATAATGATTAGCCAG