Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021815_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:7:163545667:163559800:1 gene:Zm00001d021815 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:elongation initiation factor2 description: elongation initiation factor2
Sequence

ATGAAACTCCTGAGACATGTTTCTTTTGTTGATTGCCCGGGACACGACATTCTCATGGCT
ACAATGCTTAATGGAGCTGCTATCATGGATGGAGCTCTTCTTTTGATCGCAGCAAATGAA
AGTTGTCCACAGCCCCAGACATCAGAGCATCTTGCTGCTGTTGAAATCATGCGTCTTCAA
CATATCATCATTCTGCAGAACAAGATCGATCTTATCCAGGAAAGCGCAGCGATGAATCAG
CATGAAGCAATCCAAAAATTCATCCAGGGAACAATAGCTGAAGGTGCACCTGTGGTGCCT
ATATCCGCCCAGCTGAAATACAACATTGATGTTATCTGTGAATACCTTGTGAAGAAAATC
CCCATCCCTGAAAGGAACTTTACCTCACCTCCCAACATGATTGTTATTCGCTCCTTTGAT
GTTAACAAGCCTGGTTCAGAGGTCGATGAAATCAGGGGTGGTGTAGCTGGTGGTAGTATT
CTCAGGGGAGTCCTGAGGGTGAACCAGAAGATTGAAGTTCGCCCTGGCATTGTCATGAAA
GATGAGACTGGAAACATCAAGTGCACCCCAATCTACTCAAGGATTGTCTCACTGTACGCT
GAGCAGAATGAACTCCAATTTGCTGTCCCAGGAGGGCTTATTGGTGTGGGAACAACCATG
GACCCAACTCTAACACGTGCTGACAGACTGGTTGGCCAGGTTCTTGGTGAAGTAGGTTCA
CTACCTGATGTTTACGTAGAGCTTGAGATCAATTTCTTCCTACTCCGGAGGCTGTTGGGT
GTGAGGACGAAAGGTACAGAGAAGGCAGGGAAGGTGTCGAAGCTCACCAAGGGTGAGATC
CTCATGCTTAACATAGGGTCCATGTCCACAGGCGCCCGTGTGCTCGCTGTTAAGAACGAT
CTTGCCAAGCTACAGCTCACCGCGCCTGTCTGCACGAGCCGAGGAGAGAAGGTTGCTCTG
AGCCGTCGCGTTGAGAAGCATTGGCGCCTCATCGGATGGGGCCAGATCCAGGCAGGTACA
ACACTTGAAGTACCAGCGTGCCCGGTGTAA

Peptide Sequence

PEP ID

Zm00001d021815_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:7:163545667:163559800:1 gene:Zm00001d021815 transcript:Zm00001d021815_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:elongation initiation factor2 description: elongation initiation factor2
Sequence

MKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQ
HIIILQNKIDLIQESAAMNQHEAIQKFIQGTIAEGAPVVPISAQLKYNIDVICEYLVKKI
PIPERNFTSPPNMIVIRSFDVNKPGSEVDEIRGGVAGGSILRGVLRVNQKIEVRPGIVMK
DETGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGS
LPDVYVELEINFFLLRRLLGVRTKGTEKAGKVSKLTKGEILMLNIGSMSTGARVLAVKND
LAKLQLTAPVCTSRGEKVALSRRVEKHWRLIGWGQIQAGTTLEVPACPV

Transcript Sequence

Transcript ID

Zm00001d021815_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:163545667:163559800:1 gene:Zm00001d021815 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:elongation initiation factor2 description: elongation initiation factor2
Sequence

CCAGTTACCATTGTGCAGTTCCAAAGATGGCTCGTCGTGGATTGATGGAACAGGACTTAA
GCAAACTGGATGTGACGAAGCTTCACCCCCTGTCACCTGAAGTTATCTCACGCCAAGCAA
CAATCAATATGGGTATGAATGCAATCCCTTCACTGTGGTTGTGCCGTTCTCTGATTTGGT
GTCAGCATACCTGATATATCGTTTGGTTTAGTTTCTTTGAAGTTTCCTTACGTACAAAAA
ACTATTCTGATTTCTAGAACAGTGATCCAGACATCAATCACTAGCATTGAGCTATTTGTT
TGTGGCACCATGCAATGAACTACAGTGGTTCTTCATCCTTCATTTCTTACAGCACTGTAC
TTCATGCATAACAATTATTGAGTTTCATCGGATACTTAAGATGTTGGAGCCATCCTCTTC
CCTCTGGATGCATCTGCTTAATCCTCTTCTATCAGACTGAAATCACATGTTCACCTAAAT
TTGCGATAAACATTTACTGTTTGTTGTTGTCCCACATCACTATTTATACTGGTAAGATAT
CTGTCTACTTTGTATACGATGATTTGTGCCTAATGAAGATGTACATGGTGCATTGTATAA
CATATACAAATACAAAAACCTTTGATTTTTGAACAATATGTTACTTTGGTTTTTTAGCTT
CCTATGAATTCGGAAATGGCCTGTATATGTATTCAGATTTTATGCGAAAGGAGGCCTCCT
GTGGTACCATAATATTTTTTCTGCAAATATCTCAGGTACCATTGGCCATGTGGCTCATGG
AAAGTCCACTGTTGTTAAAGCTATATCTGGTGTTCAGGTGTGATTCATGTATTCCAGTGT
AATATTTGTTTCAAACATTGAATCCGAGTTTTGTATTTGGTGTCAATTTTATGTGTCATC
TTTCTGTATCTTTTTTTCTCTCATCATGTCACTCCGACATGTGATGATTAGACACACATT
TTAGAATTTGGTACATAGGTTTAAAATGCATGCTAGGAATACATGTGCAATTTTGTTAAA
TATATGGCTCAGTGACCTTTCTGGGGATTTATTTGATATTAGTAATATTACTGTGACAAA
CGGACTGTTGTGCTTTGTGCTTTTGTTTACCAGCATCTGTTACAATGACATAGACTGGTT
AGCAACTGATTTTTTCGACCCTCAATCCTTTTTCACCATGTCTGTGCTTGGTATATAATT
TGTTTTATACTAATATTTTGGTGGCTTAATTTTGGCTTTGTAGACTGTTCGGTTCAAGAA
TGAGCTGGAACGTAACATTACTATAAAGCTGGGTTACGCTAATGCAAAAATCTACAAATG
TGAGGATGACAGATGTCCGCGACCAATGTGCTACAAGTATGCTCATCACACACTAAATGT
CAGAGTTCTCTATTAACATTGTATCTTTCTAATCTGCCACTTGTTAATAATGAAGAAGTT
AGCATGATTGTTCTAACCTTTGGTCTATGCTGAATCTTTTCTGTTCATACAATTCATTTA
CTGGTTTATATGTTTCAAAGACCATGCTCGAACTCTCATATGACTGATTGTCCAAAAAAT
GTATTATATATTATTTAGCATTTGCTGATCAAAGGCGAGGAATTATATGTTGTGTCATGT
AACCCTTGTGCACCATGTGTTGACTTTGTTTCATTCAAATTAAGGGCCTATGGAAGCGGA
AAAGAAGATAGCCCTCTATGTGATGTGCCTGGATTTGAAAACACTAGAATGAAACTCCTG
AGACATGTTTCTTTTGTTGATTGCCCGGGACACGACATTCTCATGGCTACAATGCTTAAT
GGAGCTGCTATCATGGATGGAGCTCTTCTTTTGATCGCAGCAAATGAAAGTTGTCCACAG
CCCCAGACATCAGAGCATCTTGCTGCTGTTGAAATCATGCGTCTTCAACATATCATCATT
CTGCAGAACAAGATCGATCTTATCCAGGAAAGCGCAGCGATGAATCAGCATGAAGCAATC
CAAAAATTCATCCAGGGAACAATAGCTGAAGGTGCACCTGTGGTGCCTATATCCGCCCAG
CTGAAATACAACATTGATGTTATCTGTGAATACCTTGTGAAGAAAATCCCCATCCCTGAA
AGGAACTTTACCTCACCTCCCAACATGATTGTTATTCGCTCCTTTGATGTTAACAAGCCT
GGTTCAGAGGTCGATGAAATCAGGGGTGGTGTAGCTGGTGGTAGTATTCTCAGGGGAGTC
CTGAGGGTGAACCAGAAGATTGAAGTTCGCCCTGGCATTGTCATGAAAGATGAGACTGGA
AACATCAAGTGCACCCCAATCTACTCAAGGATTGTCTCACTGTACGCTGAGCAGAATGAA
CTCCAATTTGCTGTCCCAGGAGGGCTTATTGGTGTGGGAACAACCATGGACCCAACTCTA
ACACGTGCTGACAGACTGGTTGGCCAGGTTCTTGGTGAAGTAGGTTCACTACCTGATGTT
TACGTAGAGCTTGAGATCAATTTCTTCCTACTCCGGAGGCTGTTGGGTGTGAGGACGAAA
GGTACAGAGAAGGCAGGGAAGGTGTCGAAGCTCACCAAGGGTGAGATCCTCATGCTTAAC
ATAGGGTCCATGTCCACAGGCGCCCGTGTGCTCGCTGTTAAGAACGATCTTGCCAAGCTA
CAGCTCACCGCGCCTGTCTGCACGAGCCGAGGAGAGAAGGTTGCTCTGAGCCGTCGCGTT
GAGAAGCATTGGCGCCTCATCGGATGGGGCCAGATCCAGGCAGGTACAACACTTGAAGTA
CCAGCGTGCCCGGTGTAAAGCGTCATACTCAGACGTGAGCTGAAGTTGTGTGCAAAAGAG
AAAAAAAAATGAGTTTGTTGTTAGTCCTGTCCCTGCGTTACTGCAGATCCAAAGTCCTGG
GTCACTCTAATTTTATTTTGTTTCGTTCAATTTTGGAGGCCGTTTGCATTATGATTCCTG
TGAACATTACCAGGTCGGAAACCAGTATTGTGAACATTATGAGTACGGCATATGGATCAG
CATT