Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021810_T044
CDS Infomation

cds chromosome:B73_RefGen_v4:7:163448527:163454302:-1 gene:Zm00001d021810 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRUBBELIG-RECEPTOR FAMILY 1
Sequence

ATGCTTCTGGTGATGGGCAACCCGGGGCGCTCGCGGCAGTTGTCAGCGCTGGTTGCTTCC
GCCGCCATCTTGCTGTCACTGTCCGCGTTGCCAATTTGTCGGCCCTACACCTACGAGCAA
GATGTGTTTGCGATAAACGGCTTGTACACGGCACTTGGAGCACCACAGCTGCCTAATTGG
ACTTCAAATGGTGGTGACCCCTGCAATGAAGGCTGGCAAGGTGTTTCATGTGTAGCGTCA
AATATAACCTCCATAATTCTCAGCGGTGCAAATTTAGGTGGACAGCTGGGCAACACTTTG
GGGAATTTTACATCATTAATCACCTTGGATCTCAGCAACAACAATATTGGAGGGACCATA
CCAGATGGTCTACCACTCACAATGCAGAGATTTTTCCTTTCAGCTAACCAACTAAGTGGT
AGCCTTCCAAGTACATTGTCATCCCTTACACTTTTGACAAGCATGTCACTCAATAGCAAT
CATTTGACTGGAGCGATACCAGATGTATTTTCAGCACTCACTGGACTTGCAAATTTTTTG
ACCGGTCCGTTGCCACCTTCAATGGGAAATTTGACATCATTGACTAGCCTACATATTCAG
AACAATCAAATATCTGGAACTCTTAATGTGTTGCAAGATCTCCCTTTCCAAGATTTGAAC
GTTGAAAACAACCTTTTCTCTGGTCCCGTGCCTGTGAAATTACTGAACTTGCCAAACTTC
AAGAAGGATGGGAACCCATTCAATACAAGCATAGCTCCATCTGCGCAGCCTCCCATCGCG
CCAACACCATTACCGTCTATCCCACCTTCGTCAGGGCATGTCCCCTCAAAAGAACCTGCA
CATTCTTCTAGTGTTCCAGGTGGTAGTACTTCAGGATCAGGAAAACATACTACACTCAAA
TTAGTTGGATATATTCTTATTGGAGTGGTATTAGCAGTAGTTCTTGTGCTAATTGCAATG
TACTGTTTATCCAAGTACAAAGAAAAAAGGTCGAGAGATGATATTTATATGAAAAACAAG
ATAGGAAGGGTACCTCAGAAGCTTGGAGAGCCTAAAATCAAGGAGCCACCATTAAAACTC
AAGAATGATGCTGAGAAAGCTCCGAATGTTGTTTCTGATGGAAGAGAGGAGCATAAGTTA
AAAGTGCCAACATCAGAAACTTCAAATGTGGTTTATGATCCAAGTCCAAGGGATGGGCAG
AACTTAGATTCATCACCGACAGCTGTACCTTTGGCTGTTACAATGAATAAAAAAGAGCAT
GTGATTGATATGGAAAAGGCTGATAATTTTGTTGAGGACCAACTGCATCCTCCGCAGCCG
ATGGCACTGCGGACTGAAAAAGTCACTGTCAATCCCAGTGTACGTACAAGAAGGGGAAGA
GTACCTTCAGTTGAAAAGGTGGAATCGACGACTACTGTCAAGTCCTTTTCCATTGCATCC
CTTCAACAATATACCAATAGTTTCAGTGAGGAAAATATCATAAGAGACAGCAGGTTTGGT
AAGGTGTATCTGGCAAAGCTTCCTGATGGAGAGCTACTGGAAATTTTGAAGATTGACTCT
TCTAACTCAAAAGTGCCAGTAGATGCCTTTCTTGAGCTAGTTGTGAGGATTTCTGAACTG
AGGCATCCTAACATACTTGGTCTTGTTGGATACTGTGCGGAGTTTGAGCAGCGATTACTT
GTCTATGAGTACTGTAGCAAGATGACCCTACATGATGAACTTCGTCATGTGGATGACTCA
AGCAAGCCATTATCGTGGAATGCTCGCCTCCAAGTTGCTTCAGAGGCAGCAAAAGCATTG
CAACATCTTCATGACGGTTGCCAACCACCAGTTGTACACCAGAATTTTGAACCCTCTGTT
GTTCTGCTCAACAGCACCTTAGTTGTGCATATTTCTGAATGTGGCCTTGCATCACTAGCA
TCAAAATCAGTTTCTCAGTTGTCTGGACACACCTTATTCCATTATGAAGCACCTGAAGTG
CATGAATCTGGATCAGTAAGCGATCGAAGTGATGTTTACAGCTTCGGTGTAGTTATGTTG
GAGCTTCTAACAGGACGTAAACCTTATGACAGTTCGTATCCACGAGCTGAACAACATCTA
GTACGATGGGCCACTTCTCAACTCTATGATATTGATGCCATAACGAAGATGGTTGATCCT
TCCATTCGAGGACAATGTTCTGATAAGGCATTATCCCGTTTTGCTGACATTATTAGCCGC
TGCATTCAGCATGAACCAGAATTCAGGCCACCAATGTCTGAAGTTGTCCAAGACTTAACT
CGCATGGTAAGTAATGTATCAAGGGCTTCCATGTAG

Peptide Sequence

PEP ID

Zm00001d021810_P044
PEP Infomation

pep chromosome:B73_RefGen_v4:7:163448527:163454302:-1 gene:Zm00001d021810 transcript:Zm00001d021810_T044 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRUBBELIG-RECEPTOR FAMILY 1
Sequence

MLLVMGNPGRSRQLSALVASAAILLSLSALPICRPYTYEQDVFAINGLYTALGAPQLPNW
TSNGGDPCNEGWQGVSCVASNITSIILSGANLGGQLGNTLGNFTSLITLDLSNNNIGGTI
PDGLPLTMQRFFLSANQLSGSLPSTLSSLTLLTSMSLNSNHLTGAIPDVFSALTGLANFL
TGPLPPSMGNLTSLTSLHIQNNQISGTLNVLQDLPFQDLNVENNLFSGPVPVKLLNLPNF
KKDGNPFNTSIAPSAQPPIAPTPLPSIPPSSGHVPSKEPAHSSSVPGGSTSGSGKHTTLK
LVGYILIGVVLAVVLVLIAMYCLSKYKEKRSRDDIYMKNKIGRVPQKLGEPKIKEPPLKL
KNDAEKAPNVVSDGREEHKLKVPTSETSNVVYDPSPRDGQNLDSSPTAVPLAVTMNKKEH
VIDMEKADNFVEDQLHPPQPMALRTEKVTVNPSVRTRRGRVPSVEKVESTTTVKSFSIAS
LQQYTNSFSEENIIRDSRFGKVYLAKLPDGELLEILKIDSSNSKVPVDAFLELVVRISEL
RHPNILGLVGYCAEFEQRLLVYEYCSKMTLHDELRHVDDSSKPLSWNARLQVASEAAKAL
QHLHDGCQPPVVHQNFEPSVVLLNSTLVVHISECGLASLASKSVSQLSGHTLFHYEAPEV
HESGSVSDRSDVYSFGVVMLELLTGRKPYDSSYPRAEQHLVRWATSQLYDIDAITKMVDP
SIRGQCSDKALSRFADIISRCIQHEPEFRPPMSEVVQDLTRMVSNVSRASM

Transcript Sequence

Transcript ID

Zm00001d021810_T044
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:163448527:163454302:-1 gene:Zm00001d021810 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRUBBELIG-RECEPTOR FAMILY 1
Sequence

GCGCACAAAGACTCAACACAAGCGCCCCCCTCGTCGCAGTCCCGCCGTTACATGGCCCGC
TCTGTTCCCCTTTCCGGCGCCCGCGACGGACTGCGACGAGCGGATAGATAGATCTGTGCC
CCGTCCCTGTCTCGCCATCCTCCTTTCTCCTCCTCCACTCCCTATCGACTATCGAGCAGA
GCGAATCCTTAGCGGGGAAGTCTTTCCGAGCTCAGGGAGTGGGGTTTAAAACGCGGCTCG
ACGAAAGGAAGGCCGCACTCGCTGCTGCTGCTGGTCGCTTGCTTTCGGTGGCGAGCGTCT
CGGTAAAGCGGCGTCGGCGTCGGAGGCGGCGGCAGAGACTGGACTTGCTTGCTCCTTGCT
GCGCAGTGTAGTGCTGTGCTACCTTGGAGACAGGATCCTGCCGCAGGGACTCATAATTGA
TCAGTGTGCCCCAACATAAGAGCGAAACGTGACTGAGTTTGCCAGCTCCCCCTTCATCCA
CTGTGGTCGCTCGTCTGCTAATGCCCGCATCGGAGGATTGCTCACGGATATGCTTCTGGT
GATGGGCAACCCGGGGCGCTCGCGGCAGTTGTCAGCGCTGGTTGCTTCCGCCGCCATCTT
GCTGTCACTGTCCGCGTTGCCAATTTGTCGGCCCTACACCTACGAGCAAGATGTGTTTGC
GATAAACGGCTTGTACACGGCACTTGGAGCACCACAGCTGCCTAATTGGACTTCAAATGG
TGGTGACCCCTGCAATGAAGGCTGGCAAGGTGTTTCATGTGTAGCGTCAAATATAACCTC
CATAATTCTCAGCGGTGCAAATTTAGGTGGACAGCTGGGCAACACTTTGGGGAATTTTAC
ATCATTAATCACCTTGGATCTCAGCAACAACAATATTGGAGGGACCATACCAGATGGTCT
ACCACTCACAATGCAGAGATTTTTCCTTTCAGCTAACCAACTAAGTGGTAGCCTTCCAAG
TACATTGTCATCCCTTACACTTTTGACAAGCATGTCACTCAATAGCAATCATTTGACTGG
AGCGATACCAGATGTATTTTCAGCACTCACTGGACTTGCAAATTTTTTGACCGGTCCGTT
GCCACCTTCAATGGGAAATTTGACATCATTGACTAGCCTACATATTCAGAACAATCAAAT
ATCTGGAACTCTTAATGTGTTGCAAGATCTCCCTTTCCAAGATTTGAACGTTGAAAACAA
CCTTTTCTCTGGTCCCGTGCCTGTGAAATTACTGAACTTGCCAAACTTCAAGAAGGATGG
GAACCCATTCAATACAAGCATAGCTCCATCTGCGCAGCCTCCCATCGCGCCAACACCATT
ACCGTCTATCCCACCTTCGTCAGGGCATGTCCCCTCAAAAGAACCTGCACATTCTTCTAG
TGTTCCAGGTGGTAGTACTTCAGGATCAGGAAAACATACTACACTCAAATTAGTTGGATA
TATTCTTATTGGAGTGGTATTAGCAGTAGTTCTTGTGCTAATTGCAATGTACTGTTTATC
CAAGTACAAAGAAAAAAGGTCGAGAGATGATATTTATATGAAAAACAAGATAGGAAGGGT
ACCTCAGAAGCTTGGAGAGCCTAAAATCAAGGAGCCACCATTAAAACTCAAGAATGATGC
TGAGAAAGCTCCGAATGTTGTTTCTGATGGAAGAGAGGAGCATAAGTTAAAAGTGCCAAC
ATCAGAAACTTCAAATGTGGTTTATGATCCAAGTCCAAGGGATGGGCAGAACTTAGATTC
ATCACCGACAGCTGTACCTTTGGCTGTTACAATGAATAAAAAAGAGCATGTGATTGATAT
GGAAAAGGCTGATAATTTTGTTGAGGACCAACTGCATCCTCCGCAGCCGATGGCACTGCG
GACTGAAAAAGTCACTGTCAATCCCAGTGTACGTACAAGAAGGGGAAGAGTACCTTCAGT
TGAAAAGGTGGAATCGACGACTACTGTCAAGTCCTTTTCCATTGCATCCCTTCAACAATA
TACCAATAGTTTCAGTGAGGAAAATATCATAAGAGACAGCAGGTTTGGTAAGGTGTATCT
GGCAAAGCTTCCTGATGGAGAGCTACTGGAAATTTTGAAGATTGACTCTTCTAACTCAAA
AGTGCCAGTAGATGCCTTTCTTGAGCTAGTTGTGAGGATTTCTGAACTGAGGCATCCTAA
CATACTTGGTCTTGTTGGATACTGTGCGGAGTTTGAGCAGCGATTACTTGTCTATGAGTA
CTGTAGCAAGATGACCCTACATGATGAACTTCGTCATGTGGATGACTCAAGCAAGCCATT
ATCGTGGAATGCTCGCCTCCAAGTTGCTTCAGAGGCAGCAAAAGCATTGCAACATCTTCA
TGACGGTTGCCAACCACCAGTTGTACACCAGAATTTTGAACCCTCTGTTGTTCTGCTCAA
CAGCACCTTAGTTGTGCATATTTCTGAATGTGGCCTTGCATCACTAGCATCAAAATCAGT
TTCTCAGTTGTCTGGACACACCTTATTCCATTATGAAGCACCTGAAGTGCATGAATCTGG
ATCAGTAAGCGATCGAAGTGATGTTTACAGCTTCGGTGTAGTTATGTTGGAGCTTCTAAC
AGGACGTAAACCTTATGACAGTTCGTATCCACGAGCTGAACAACATCTAGTACGATGGGC
CACTTCTCAACTCTATGATATTGATGCCATAACGAAGATGGTTGATCCTTCCATTCGAGG
ACAATGTTCTGATAAGGCATTATCCCGTTTTGCTGACATTATTAGCCGCTGCATTCAGCA
TGAACCAGAATTCAGGCCACCAATGTCTGAAGTTGTCCAAGACTTAACTCGCATGGTAAG
TAATGTATCAAGGGCTTCCATGTAGGCTATCCCTTAAACAATGGTAAAATGTGGAGGTCC
GTCCTTATAGAAATTAGAATTCGAGGACGCACCTCGTTCTGGAGCTTCTTGCTAGATTCA
GTTCTCTCTGGCCATGATTCAAGATGCCTTTGACGACCATTGATGCGGTAGTAGGATATT
TTGGCCAATGCAAAATGGGTGGAACACAGTGGCAGGATGCAGAGACTGCACCACGTTTTG
TCCACTGCCAGTAATGCTCCTCTGAATCTCTGGTCAATTTATAGTTCAAAGCTATTGTTG
TAATTCTGTAGTCTGCACTCTGCACAATATATTTCTTAGT