Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021806_T261
CDS Infomation	cds chromosome:B73_RefGen_v4:7:163327873:163338784:-1 gene:Zm00001d021806 gene_biotype:protein_coding transcript_biotype:protein_coding description:HOPM interactor 7
Sequence	ATGGCCGGCGCTGCAGGTGGGTTCGTCACGCGGGCGTTCGAGGCCATGCTCAAGGAGTGC GCCGCCAACCGCGGCAAGTTCGCCGCGCTGCAGCAATCCATCCAGTCATACCTCGATAGC ATCAAGGGGGCTACGGCGGAGGGCGCGGTCATCACGGAGGCGCTCGCGTCGGCTGGGCGC GTGCTCGACGGACCGCAGGCCGAGCTGGTGCTGCAGCCGCTCCGCCTCGCCGTCGAGACC AAGCACGTCAAGCTCGTCGAGCCCGCGCTCGACTGCCTCCACAAACTTATTGCTTATGAC CATTTAGAAGGCGATCCTGGTTTAGAAGGTGGTAAAAACTCCCCAATATTTACAGACATC TTGAACATGGTATGTGGTTGCGTTGATAACACATCCTCTGACAGTACTGTTCTCCAAGTC TTGAAAGTGCTTCTCAATGCTGTTGCTTCAAATAGGTTTAGAGTTCATGGAGAGCCATTG CTTGGGGTCATTAGAGTATGCTATAACATTGCTCTTAATAGCAAGAGCCCTGTGAACCAG GCTACCTCAAAGGCTATGTTAACCCAGATGATCAGCATTGTATTCAGGAGAATGGAATCT GAGCAGGTTTCTGTATTGCCTGCAAGCTCTGTGGTTAAAGATACACCTTCATCTATCACA AATGAATCTGAAAATGGAGAAATATCTACCGATGGCCAAGATGAGGAAAAAGTTACTCCG GGAGATGCATTGTCTATGAATCGGCCTTCTGAAGCACCTCCAACATCTGTTGAAGAGCTT CAGAATCTTGCTGGTGGAGCAGATATTAAGGGGCTGGAAGCTGTTCTAGACAAGGCTGTT GAACTTGAAGATGGGAAGAAAGTGTCACGTGGAATTGACCTGGACACTGTGAACATAATA CAGCGGGATGCACTATTGCTCTTTCGAACTCTTTGCAAGATGAGCATGAAAGAAGAAAGT GATGAAGTTGCTACCAAGACAAGGCTGCTATCACTTGAACTGCTCCAGGGATTGCTAGAG GGAGTCAGCAACGCATTCACAAAAAATTTCCACTTCATTGATTCGGTTAAAGCATATCTT TCATATGCTCTTCTGCGAGCATCTGTCACTTCATCTCCAGTTGTTTTTCAGTATGCTTGC GGTATATTTTCAGTTCTGTTGCTCCGTTTTAGAGAGAGTCTGAAGGGGGAAATTGGTGTC TTCTTTCCTCTGATAGTTTTAAGGTCTTTGGATAGCTCTGATAGCTCCCTCAGCCAGAAG GCTAGTGTTCTTAGGATGTTGGAGAAAGTTTGCAAAGATCCCCAAATGCTTGCAGATGTG TTTGTGAACTATGACTGTGATCTTGAGGGACCAAATCTTTTTGAACGCACGGTTAGTGCA CTCTCAAGAATAGCACAAGGGTCTCAAATTGCTGATACTAACTCCATTGTGTCATCCCAG ACAGTTTCTGTAAAAGGCTCGTCTCTCCAGTGTTTGGTGAGTATTCTGAAGTCATTGGCT GTTTGGGAGCAACTTCGAAGATATTCCTTAAAGCAAGGGAGCATTGTTGAATCTCATGAA GGGGATGCTTCAAGGAGCGTGACAACTGATGAGATGAAGAGCCAAGAGGATGTTCGGAAT CAGTTTGAGAGAGCCAAAGCTCATAAGTCGACACTGGAGGCTGCAATCTCAGAGTTTAAT CGTAAACCAACTAAAGGGATTGAATATTTGTTGTCAAATAAATTGATAGAAAATAAGGCA TCATCTGTAGCTCAGTTTCTCAAGAGCAACCCGGGCCTGGATAAGGTTATGATTGGTGAG TACTTGGGACAGCATGAGGAGTTCCCTCTTGCTGTGATGCATGCCTATGTTGACTCCATG AAGTTTTCAGGATTGAAGTTTGATGCTGCAATTCGTGAGTTCCTGAAAGGATTTCGCCTT CCCGGTGAGGCACAGAAGATAGATCGCATAATGGAAAAGTTTGCTGAGCGGTACTGTGCT GATAATCCTGAGCTTTTCAAAAATGCAGATACTGCTTATGTTCTTGCTTATGCTGTTATA ATGTTGAATACTGATGCACACAATCCAATGGTGTGGCCTAAGATGTCAAAATCAGATTTT GTTCGTATGAACACTGCGAGTGATGCAGAAGAATGTGCCCCAAAGGAGCTCTTGGAAGAA ATTTATGATTCCATTGTCAAGGAAGAGATAAAGATAAAAGATGATTCTCATGATACTTCA AAAACCACAAAGAGACCTGAAACAGAAGAAACAGGCCGTCTTGTCAATATCCTCAATTTA GCCCTTCCAAGACTGAAGTCAGCTAGCGATACAAAGGCTGAGAGTGAAAAGATCATCAAA CAGACACAGGCACTTTTCAGGAACCAGGGACAGAAGAAAGGTGTTTTTCACGTTGCACAG CAGGTGGAGCTTGTTAGGCCAATGCTTGAAGCTGTAGGATGGCCTTTGCTTGCAACATTT TCTGTGACCATGGAGGAAGGTGACAGTAAGCCTAGGGTTGTATCATGCATGGAAGGGTTT CGTGCTGGTATCCATCTTACTCGTGTTCTTGGGATGGACACCATGCGCTATGCTTTCTTG ACGTCCTTAGTGAGGTTTACATTTTTGCATGCTCCCAAGGAGATGCGTAGTAAAAATGTC GAGGCACTGAAGACTCTTCTTGGTTTAGCTGACACTGATATGGATGCTTTACAAGATACT TGGAATGCTGTTTTAGAATGTGTATCGAGACTCGAATATATCACTTCAAATCCTTCAATT TCTGCAACTGTAATGCTGGGATCAAATCAAATATCAAGGGATTCTGTAGTCCAATCGCTG AAAGAGTTGGCTGGGAAGCCTGCTGAACAAATCTTTGTAAACAGTGTAAAACTGCCAAGT GATTCAATTGTTGAATTCTTCACCGCCCTTTGTGGCGTTTCTGCTGAAGAGCTAAAACAA ACACCTGCTCGTGTCTTTAGCTTGCAGAAGCTTGTAGAGATAAGCTATTATAACATGGCT CGCATACGGCTGGTGTGGGCTAGAATCTGGTCTGTGTTGGCCCAGCATTTTATTGCTGCT GGAAGCCACCACGAGGAGAAAGTTGCAATGTATGCCATTGATTCGCTAAGACAACTTGGT ATGAAGTACTTGGAGCGTGCTGAATTAAACAACTTCACATTTCAGAGCGACATACTGAAA CCCTTTGTCATTTTAATGAGGAATAGTCACAACTCAAAAATCCGAGGTTTAATTGTTGAT TGCATTGTTCAGTTGATCAAGTCAAAAGTTGGCAGCATAAAGTCAGGGTGGCGTTGTGTA TTCATGATATTTACTGCAGCGGCTGATGACGAGGATGAATCAATTGTTGAGAGTGCTTTT GAAAATGTAGAACAAGTTATCTTGGAACATTTTGATCAAGTCGTTGGTGATTGCTTCATG GATTGTGTCAACTGTCTTATTGGTTTTGCAAATAACAAGTGCACTCCTCGGATTAGTTTG AAGGCTATTGCTCTCCTGCGTATATGTGAAGATCGTTTGGCAGAGGGATTCATTCCAGGC GGTGCTGTTAAACCTATTGATGTTGTTCCAGAGGCCAATTTTGATGTGTCTGAGCATTAC TGGTTTCCTATGCTAGCTGGTTTGTCTGATTTGACTTTGGACTCTAGACCAGAAGTCAGA CATTGTGCACTGGAAGTGTTGTTTGATTTGTTGAATGAAAGAGGACATAAGTTCTCTTCT

Peptide Sequence

PEP ID	Zm00001d021806_P261
PEP Infomation	pep chromosome:B73_RefGen_v4:7:163327873:163338784:-1 gene:Zm00001d021806 transcript:Zm00001d021806_T261 gene_biotype:protein_coding transcript_biotype:protein_coding description:HOPM interactor 7
Sequence	MAGAAGGFVTRAFEAMLKECAANRGKFAALQQSIQSYLDSIKGATAEGAVITEALASAGR VLDGPQAELVLQPLRLAVETKHVKLVEPALDCLHKLIAYDHLEGDPGLEGGKNSPIFTDI LNMVCGCVDNTSSDSTVLQVLKVLLNAVASNRFRVHGEPLLGVIRVCYNIALNSKSPVNQ ATSKAMLTQMISIVFRRMESEQVSVLPASSVVKDTPSSITNESENGEISTDGQDEEKVTP GDALSMNRPSEAPPTSVEELQNLAGGADIKGLEAVLDKAVELEDGKKVSRGIDLDTVNII QRDALLLFRTLCKMSMKEESDEVATKTRLLSLELLQGLLEGVSNAFTKNFHFIDSVKAYL SYALLRASVTSSPVVFQYACGIFSVLLLRFRESLKGEIGVFFPLIVLRSLDSSDSSLSQK ASVLRMLEKVCKDPQMLADVFVNYDCDLEGPNLFERTVSALSRIAQGSQIADTNSIVSSQ TVSVKGSSLQCLVSILKSLAVWEQLRRYSLKQGSIVESHEGDASRSVTTDEMKSQEDVRN QFERAKAHKSTLEAAISEFNRKPTKGIEYLLSNKLIENKASSVAQFLKSNPGLDKVMIGE YLGQHEEFPLAVMHAYVDSMKFSGLKFDAAIREFLKGFRLPGEAQKIDRIMEKFAERYCA DNPELFKNADTAYVLAYAVIMLNTDAHNPMVWPKMSKSDFVRMNTASDAEECAPKELLEE IYDSIVKEEIKIKDDSHDTSKTTKRPETEETGRLVNILNLALPRLKSASDTKAESEKIIK QTQALFRNQGQKKGVFHVAQQVELVRPMLEAVGWPLLATFSVTMEEGDSKPRVVSCMEGF RAGIHLTRVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALKTLLGLADTDMDALQDT WNAVLECVSRLEYITSNPSISATVMLGSNQISRDSVVQSLKELAGKPAEQIFVNSVKLPS DSIVEFFTALCGVSAEELKQTPARVFSLQKLVEISYYNMARIRLVWARIWSVLAQHFIAA GSHHEEKVAMYAIDSLRQLGMKYLERAELNNFTFQSDILKPFVILMRNSHNSKIRGLIVD CIVQLIKSKVGSIKSGWRCVFMIFTAAADDEDESIVESAFENVEQVILEHFDQVVGDCFM DCVNCLIGFANNKCTPRISLKAIALLRICEDRLAEGFIPGGAVKPIDVVPEANFDVSEHY WFPMLAGLSDLTLDSRPEVRHCALEVLFDLLNERGHKFSS

Transcript Sequence

Transcript ID	Zm00001d021806_T261
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:163327873:163338784:-1 gene:Zm00001d021806 gene_biotype:protein_coding transcript_biotype:protein_coding description:HOPM interactor 7
Sequence	CTGCTGAAACTGTGAAAGCTTCTGAAGACAAATCAGCCGAGCGAGCGTGCGTGCGTGCGA GACAACCAGGTCCGATCCGCCCCCGCCGAGCCGAGGACAGCAGCGGGGGCTCTCGGTCTC CTCCTCCAGATCTTGCACCCAATCCAGATCTCGCGCCCTCTCCGTTCCTCTCCTATGTCC ATTCCCCCTCCTCGGATCTAACCACTCCGTCCCTCTCCCCGTCCCCGCGTCCGGAGCTGA GATCCGTGGTCATGGCCGGCGCTGCAGGTGGGTTCGTCACGCGGGCGTTCGAGGCCATGC TCAAGGAGTGCGCCGCCAACCGCGGCAAGTTCGCCGCGCTGCAGCAATCCATCCAGTCAT ACCTCGATAGCATCAAGGGGGCTACGGCGGAGGGCGCGGTCATCACGGAGGCGCTCGCGT CGGCTGGGCGCGTGCTCGACGGACCGCAGGCCGAGCTGGTGCTGCAGCCGCTCCGCCTCG CCGTCGAGACCAAGCACGTCAAGCTCGTCGAGCCCGCGCTCGACTGCCTCCACAAACTTA TTGCTTATGACCATTTAGAAGGCGATCCTGGTTTAGAAGGTGGTAAAAACTCCCCAATAT TTACAGACATCTTGAACATGGTATGTGGTTGCGTTGATAACACATCCTCTGACAGTACTG TTCTCCAAGTCTTGAAAGTGCTTCTCAATGCTGTTGCTTCAAATAGGTTTAGAGTTCATG GAGAGCCATTGCTTGGGGTCATTAGAGTATGCTATAACATTGCTCTTAATAGCAAGAGCC CTGTGAACCAGGCTACCTCAAAGGCTATGTTAACCCAGATGATCAGCATTGTATTCAGGA GAATGGAATCTGAGCAGGTTTCTGTATTGCCTGCAAGCTCTGTGGTTAAAGATACACCTT CATCTATCACAAATGAATCTGAAAATGGAGAAATATCTACCGATGGCCAAGATGAGGAAA AAGTTACTCCGGGAGATGCATTGTCTATGAATCGGCCTTCTGAAGCACCTCCAACATCTG TTGAAGAGCTTCAGAATCTTGCTGGTGGAGCAGATATTAAGGGGCTGGAAGCTGTTCTAG ACAAGGCTGTTGAACTTGAAGATGGGAAGAAAGTGTCACGTGGAATTGACCTGGACACTG TGAACATAATACAGCGGGATGCACTATTGCTCTTTCGAACTCTTTGCAAGATGAGCATGA AAGAAGAAAGTGATGAAGTTGCTACCAAGACAAGGCTGCTATCACTTGAACTGCTCCAGG GATTGCTAGAGGGAGTCAGCAACGCATTCACAAAAAATTTCCACTTCATTGATTCGGTTA AAGCATATCTTTCATATGCTCTTCTGCGAGCATCTGTCACTTCATCTCCAGTTGTTTTTC AGTATGCTTGCGGTATATTTTCAGTTCTGTTGCTCCGTTTTAGAGAGAGTCTGAAGGGGG AAATTGGTGTCTTCTTTCCTCTGATAGTTTTAAGGTCTTTGGATAGCTCTGATAGCTCCC TCAGCCAGAAGGCTAGTGTTCTTAGGATGTTGGAGAAAGTTTGCAAAGATCCCCAAATGC TTGCAGATGTGTTTGTGAACTATGACTGTGATCTTGAGGGACCAAATCTTTTTGAACGCA CGGTTAGTGCACTCTCAAGAATAGCACAAGGGTCTCAAATTGCTGATACTAACTCCATTG TGTCATCCCAGACAGTTTCTGTAAAAGGCTCGTCTCTCCAGTGTTTGGTGAGTATTCTGA AGTCATTGGCTGTTTGGGAGCAACTTCGAAGATATTCCTTAAAGCAAGGGAGCATTGTTG AATCTCATGAAGGGGATGCTTCAAGGAGCGTGACAACTGATGAGATGAAGAGCCAAGAGG ATGTTCGGAATCAGTTTGAGAGAGCCAAAGCTCATAAGTCGACACTGGAGGCTGCAATCT CAGAGTTTAATCGTAAACCAACTAAAGGGATTGAATATTTGTTGTCAAATAAATTGATAG AAAATAAGGCATCATCTGTAGCTCAGTTTCTCAAGAGCAACCCGGGCCTGGATAAGGTTA TGATTGGTGAGTACTTGGGACAGCATGAGGAGTTCCCTCTTGCTGTGATGCATGCCTATG TTGACTCCATGAAGTTTTCAGGATTGAAGTTTGATGCTGCAATTCGTGAGTTCCTGAAAG GATTTCGCCTTCCCGGTGAGGCACAGAAGATAGATCGCATAATGGAAAAGTTTGCTGAGC GGTACTGTGCTGATAATCCTGAGCTTTTCAAAAATGCAGATACTGCTTATGTTCTTGCTT ATGCTGTTATAATGTTGAATACTGATGCACACAATCCAATGGTGTGGCCTAAGATGTCAA AATCAGATTTTGTTCGTATGAACACTGCGAGTGATGCAGAAGAATGTGCCCCAAAGGAGC TCTTGGAAGAAATTTATGATTCCATTGTCAAGGAAGAGATAAAGATAAAAGATGATTCTC ATGATACTTCAAAAACCACAAAGAGACCTGAAACAGAAGAAACAGGCCGTCTTGTCAATA TCCTCAATTTAGCCCTTCCAAGACTGAAGTCAGCTAGCGATACAAAGGCTGAGAGTGAAA AGATCATCAAACAGACACAGGCACTTTTCAGGAACCAGGGACAGAAGAAAGGTGTTTTTC ACGTTGCACAGCAGGTGGAGCTTGTTAGGCCAATGCTTGAAGCTGTAGGATGGCCTTTGC TTGCAACATTTTCTGTGACCATGGAGGAAGGTGACAGTAAGCCTAGGGTTGTATCATGCA TGGAAGGGTTTCGTGCTGGTATCCATCTTACTCGTGTTCTTGGGATGGACACCATGCGCT ATGCTTTCTTGACGTCCTTAGTGAGGTTTACATTTTTGCATGCTCCCAAGGAGATGCGTA GTAAAAATGTCGAGGCACTGAAGACTCTTCTTGGTTTAGCTGACACTGATATGGATGCTT TACAAGATACTTGGAATGCTGTTTTAGAATGTGTATCGAGACTCGAATATATCACTTCAA ATCCTTCAATTTCTGCAACTGTAATGCTGGGATCAAATCAAATATCAAGGGATTCTGTAG TCCAATCGCTGAAAGAGTTGGCTGGGAAGCCTGCTGAACAAATCTTTGTAAACAGTGTAA AACTGCCAAGTGATTCAATTGTTGAATTCTTCACCGCCCTTTGTGGCGTTTCTGCTGAAG AGCTAAAACAAACACCTGCTCGTGTCTTTAGCTTGCAGAAGCTTGTAGAGATAAGCTATT ATAACATGGCTCGCATACGGCTGGTGTGGGCTAGAATCTGGTCTGTGTTGGCCCAGCATT TTATTGCTGCTGGAAGCCACCACGAGGAGAAAGTTGCAATGTATGCCATTGATTCGCTAA GACAACTTGGTATGAAGTACTTGGAGCGTGCTGAATTAAACAACTTCACATTTCAGAGCG ACATACTGAAACCCTTTGTCATTTTAATGAGGAATAGTCACAACTCAAAAATCCGAGGTT TAATTGTTGATTGCATTGTTCAGTTGATCAAGTCAAAAGTTGGCAGCATAAAGTCAGGGT GGCGTTGTGTATTCATGATATTTACTGCAGCGGCTGATGACGAGGATGAATCAATTGTTG AGAGTGCTTTTGAAAATGTAGAACAAGTTATCTTGGAACATTTTGATCAAGTCGTTGGTG ATTGCTTCATGGATTGTGTCAACTGTCTTATTGGTTTTGCAAATAACAAGTGCACTCCTC GGATTAGTTTGAAGGCTATTGCTCTCCTGCGTATATGTGAAGATCGTTTGGCAGAGGGAT TCATTCCAGGCGGTGCTGTTAAACCTATTGATGTTGTTCCAGAGGCCAATTTTGATGTGT CTGAGCATTACTGGTTTCCTATGCTAGCTGGTTTGTCTGATTTGACTTTGGACTCTAGAC CAGAAGTCAGACATTGTGCACTGGAAGTGTTGTTTGATTTGTTGAATGAAAGAGGACATA AGTTCTCTTCTCC