Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021790_T026
CDS Infomation

cds chromosome:B73_RefGen_v4:7:163073139:163077872:1 gene:Zm00001d021790 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 22 description:B3 domain-containing transcription factor VAL3
Sequence

ATGGGCTTCAGGAAGGCAACTAACAATTCTTTCGAACAGGAGCAAGCTACAAAGCCTGCC
AATGGCGCCCTAGCAACTTCAGAAGCAAATGGTAAAGTTTCTGCCCCAGATTCCAGTCCA
AATGCTGCAGTTTCCCGTCAAAACAAGCTCAACACAGAGACCAAAAGTTCTAGTCCTGTG
GAACAAGCCACTGCATTGAAAATGGACAAGGATGGATTAACACAGAAGGAAGGGCCTGGA
ACTGGTAGTTCTTCCCCAGGTTCTGTCAAGAGAAAAACAACTATTCTTGGTCAAAAGAAT
AAAAGATTACGGATGGATAATGAGGAATCAATGGAGTTGAAGATAACATGGGAGGAAGCT
CAAGAATTGCTTCGCCCTCCTCCTAAGGCCCCATCCATTGTTATTGTTGATGGCCATGAG
TTTGAGGAATATGAGGAGCCACCGGTACTTGGAAGGAAGACTTATTTTGTAGCAGATAAA
TCAGGTTCGAACCATCAATGGGCCCAATGTGAAGATTGTTCCAAATGGAGGAAACTTCCA
ATAGATGCTCTGTTGCCCTCCAAATGGACCTGCTCTGACAACAAATGGGATCCAGAGAGG
TGTTCTTGCGAATCTGCACAGGAAATAAGTATAGAGGAGCTTGCAGAATTCATTCCTATA
AAACCTGCCAAAAAGCCCAAATTGAAGATAGAATCTGATGCTATCGATGCTTCAGATGGG
CTGGACACGCTTGCAAACCTTGCGATTCTTGGTGAAGGTGAAGCTCTCCCTTCACAGCCA
ACAACAAAACATCCCCGCCATCGTCCGGGCTGCTCATGCATCGTCTGCATCCAACCACCA
AGCGGGAAGGGTCCAAAGCACAAGCAAACTTGCACCTGTAACGTTTGTATGACGGTTCGC
CGCCGTTTCAGGACACTCATGCTTCGACGCGAGAAGAAGGCGACAAAGGATCTGTCTCGC
AAGAAAGAGACGGGCCAATCCAGTGAGAAGGCCACACAACAAGCTGTGTCCGGACCTCCA
GGAGCCAATGCCACTGCAACCAGATCTGCCCAGAAAGCAGATGGAAACACCGATGGACCT
GAAGACATGGCCGTCGATCACAAGGTGACAACATCCTCTCCCGTCAAGAACCATATTGAC
CTGAACATCCAACCTGAACGGGACGATGAGCAGTCACCGAAATCTGGTGCGGCTGGTTTG
TTGAGCCGAGACAATGCAACTTAG

Peptide Sequence

PEP ID

Zm00001d021790_P026
PEP Infomation

pep chromosome:B73_RefGen_v4:7:163073139:163077872:1 gene:Zm00001d021790 transcript:Zm00001d021790_T026 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 22 description:B3 domain-containing transcription factor VAL3
Sequence

MGFRKATNNSFEQEQATKPANGALATSEANGKVSAPDSSPNAAVSRQNKLNTETKSSSPV
EQATALKMDKDGLTQKEGPGTGSSSPGSVKRKTTILGQKNKRLRMDNEESMELKITWEEA
QELLRPPPKAPSIVIVDGHEFEEYEEPPVLGRKTYFVADKSGSNHQWAQCEDCSKWRKLP
IDALLPSKWTCSDNKWDPERCSCESAQEISIEELAEFIPIKPAKKPKLKIESDAIDASDG
LDTLANLAILGEGEALPSQPTTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCMTVR
RRFRTLMLRREKKATKDLSRKKETGQSSEKATQQAVSGPPGANATATRSAQKADGNTDGP
EDMAVDHKVTTSSPVKNHIDLNIQPERDDEQSPKSGAAGLLSRDNAT

Transcript Sequence

Transcript ID

Zm00001d021790_T026
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:163073139:163077872:1 gene:Zm00001d021790 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 22 description:B3 domain-containing transcription factor VAL3
Sequence

AACATTTTGGACAGACATACTTCCCTCCAATCTCCCAACCTGAAGGGCTCCCTTTAAAGG
TTCAGGATGCCAGTGGTAAAGAATGGATATTCCAATTCCGTTTCTGGCCAAATAATAATA
GCAGGATGTATGTATTGGAGGGTGTCACACCTTGCATTCAGTCAATGCAGTTACAAGCAG
GCGACACAGTCGAATAGACCCAGAAGGGAAATTGATCATGGGCTTCAGGAAGGCAACTAA
CAATTCTTTCGAACAGGAGCAAGCTACAAAGCCTGCCAATGGCGCCCTAGCAACTTCAGA
AGCAAATGGTAAAGTTTCTGCCCCAGATTCCAGTCCAAATGCTGCAGTTTCCCGTCAAAA
CAAGCTCAACACAGAGACCAAAAGTTCTAGTCCTGTGGAACAAGCCACTGCATTGAAAAT
GGACAAGGATGGATTAACACAGAAGGAAGGGCCTGGAACTGGTAGTTCTTCCCCAGGTTC
TGTCAAGAGAAAAACAACTATTCTTGGTCAAAAGAATAAAAGATTACGGATGGATAATGA
GGAATCAATGGAGTTGAAGATAACATGGGAGGAAGCTCAAGAATTGCTTCGCCCTCCTCC
TAAGGCCCCATCCATTGTTATTGTTGATGGCCATGAGTTTGAGGAATATGAGGAGCCACC
GGTACTTGGAAGGAAGACTTATTTTGTAGCAGATAAATCAGGTTCGAACCATCAATGGGC
CCAATGTGAAGATTGTTCCAAATGGAGGAAACTTCCAATAGATGCTCTGTTGCCCTCCAA
ATGGACCTGCTCTGACAACAAATGGGATCCAGAGAGGTGTTCTTGCGAATCTGCACAGGA
AATAAGTATAGAGGAGCTTGCAGAATTCATTCCTATAAAACCTGCCAAAAAGCCCAAATT
GAAGATAGAATCTGATGCTATCGATGCTTCAGATGGGCTGGACACGCTTGCAAACCTTGC
GATTCTTGGTGAAGGTGAAGCTCTCCCTTCACAGCCAACAACAAAACATCCCCGCCATCG
TCCGGGCTGCTCATGCATCGTCTGCATCCAACCACCAAGCGGGAAGGGTCCAAAGCACAA
GCAAACTTGCACCTGTAACGTTTGTATGACGGTTCGCCGCCGTTTCAGGACACTCATGCT
TCGACGCGAGAAGAAGGCGACAAAGGATCTGTCTCGCAAGAAAGAGACGGGCCAATCCAG
TGAGAAGGCCACACAACAAGCTGTGTCCGGACCTCCAGGAGCCAATGCCACTGCAACCAG
ATCTGCCCAGAAAGCAGATGGAAACACCGATGGACCTGAAGACATGGCCGTCGATCACAA
GGTGACAACATCCTCTCCCGTCAAGAACCATATTGACCTGAACATCCAACCTGAACGGGA
CGATGAGCAGTCACCGAAATCTGGTGCGGCTGGTTTGTTGAGCCGAGACAATGCAACTTA
GAGAGTGGATAGCGTGGATTGATTGATCATACCATACCAATGAGTGGACATAGATAACCG
ATCGAA