Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021764_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:7:162638504:162642918:-1 gene:Zm00001d021764 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein THYLAKOID FORMATION 1 chloroplastic
Sequence

ATGGCGGCCATATCGTCACTTCCCTTCGCGGCGCTGCGCGGAGCCGCCGAGTGGAGGCCT
TCGTCGACGGCGGCGGCCGTCTCCGGCGCCGTCGTGCTCAGCGCGAGGTCTCGCCGGGGC
TCGCGCTCGGTGGTGCGATGTGTCGCCACGACGGGTGATGTCCCACCCACTGTCGCAGAA
ACAAAACTGAACTTCCTTAAGTCATACAAACGCCCAATCCCAAGCATTTACAGTGCAGTC
TTACAAGAACTTTTGGTGCAGCAACACCTGATGAGATACAAAAAAACCTATCAGTATGAT
GCTGTGTTTGCTCTTGGCTTCGTCACTGTCTATGATCAGCTCATGGAAGGGTACCCCAGC
AATGAGGACAGGGATTCCATCTTCAAGGCATATATAACAGCATTAAATGAAGATCCTGAT
CAATACAGAGCTGATGCACTAAAGATGGAAGAGTGGGCACGTTCCCAGAACGGTAGTTCC
TTAGTTGATTTTTCTTCCAGAGATGGAGAAATCGAGGCTATTCTGAAAGATATATCAGAA
AGGGCCAAGGGTAAGGGAAACTTCAGCTACAGCCGATTCTTTGCAGTTGGCTTGTTCCGT
TTGCTTGAGCTCTCAAATGCAACGGAGCCAACAATACTAGACAAGGTTGTTCCTTCCCTC
ATTAATTTGTTTCTGCCTTTCTTGTCCTGTGGTCAAGTTTTTTTTGTTTTTGCATTTCTT
GTTTGTTGTATGTGTTCTGAATTATGCTTCCTATTTCGCCTACAATTTTATTTCTGA

Peptide Sequence

PEP ID

Zm00001d021764_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:7:162638504:162642918:-1 gene:Zm00001d021764 transcript:Zm00001d021764_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein THYLAKOID FORMATION 1 chloroplastic
Sequence

MAAISSLPFAALRGAAEWRPSSTAAAVSGAVVLSARSRRGSRSVVRCVATTGDVPPTVAE
TKLNFLKSYKRPIPSIYSAVLQELLVQQHLMRYKKTYQYDAVFALGFVTVYDQLMEGYPS
NEDRDSIFKAYITALNEDPDQYRADALKMEEWARSQNGSSLVDFSSRDGEIEAILKDISE
RAKGKGNFSYSRFFAVGLFRLLELSNATEPTILDKVVPSLINLFLPFLSCGQVFFVFAFL
VCCMCSELCFLFRLQFYF

Transcript Sequence

Transcript ID

Zm00001d021764_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:162638504:162642918:-1 gene:Zm00001d021764 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein THYLAKOID FORMATION 1 chloroplastic
Sequence

GAACAAGGAACAATAGCCTTTCCTCTCACTCGCCCCTCTGCATTTACCACTTTGCCCTCG
TCGGCGGCGCTGACCACCCGCCGCCGAGTCCGGCGAAACAACCGCCTGTAGTTCCAGAGT
AGTACCTCATGGCGGCCATATCGTCACTTCCCTTCGCGGCGCTGCGCGGAGCCGCCGAGT
GGAGGCCTTCGTCGACGGCGGCGGCCGTCTCCGGCGCCGTCGTGCTCAGCGCGAGGTCTC
GCCGGGGCTCGCGCTCGGTGGTGCGATGTGTCGCCACGACGGGTGATGTCCCACCCACTG
TCGCAGAAACAAAACTGAACTTCCTTAAGTCATACAAACGCCCAATCCCAAGCATTTACA
GTGCAGTCTTACAAGAACTTTTGGTGCAGCAACACCTGATGAGATACAAAAAAACCTATC
AGTATGATGCTGTGTTTGCTCTTGGCTTCGTCACTGTCTATGATCAGCTCATGGAAGGGT
ACCCCAGCAATGAGGACAGGGATTCCATCTTCAAGGCATATATAACAGCATTAAATGAAG
ATCCTGATCAATACAGAGCTGATGCACTAAAGATGGAAGAGTGGGCACGTTCCCAGAACG
GTAGTTCCTTAGTTGATTTTTCTTCCAGAGATGGAGAAATCGAGGCTATTCTGAAAGATA
TATCAGAAAGGGCCAAGGGTAAGGGAAACTTCAGCTACAGCCGATTCTTTGCAGTTGGCT
TGTTCCGTTTGCTTGAGCTCTCAAATGCAACGGAGCCAACAATACTAGACAAGGTTGTTC
CTTCCCTCATTAATTTGTTTCTGCCTTTCTTGTCCTGTGGTCAAGTTTTTTTTGTTTTTG
CATTTCTTGTTTGTTGTATGTGTTCTGAATTATGCTTCCTATTTCGCCTACAATTTTATT
TCTGAAAACTTTTACACCCCCCCCCCCCCCCCAAAAGTCTAAACCACACCAGTTGCTGAA
ACTGAATGTAATATTCAGTATCCACAACTGTTTTAGGTAGAAAAGCATATATCAAACTAT
AATTTGAATTCATTTACACTGGCCTGTTCAATGTTTTTCTCCCGGGATGGAGATTGTAAA
TATATTAACCAGTATAGCACTATAGCATGTGATTGTCAGTATGAAGTTGAACAGAATTTT
TTGGTGTTTCTAACAAAGTAGAAAATAAAATTTTGGGTTCAAATAAGTCTGCTTGGTAGC
TTTCTCAAGGACTTATTCAGATATATGTGTTGGCAGACTCATGGAAGTTGGGTTTCAATC
TTGAAATCTCATTTGACCTAGACATGGTCTGGTCTGCCCTTCTACCCAGTACAGCACGGT
AGACTTGTAACTCATTTTTTTTTGCTCATAATGTTTTTGGCTGGCGCTTGGGAATATGAT
AGATTTCCATTCAGATATAAGCTGTCATTCAACATATGCTTATCTTGGTTTATATTTTTT
TTAGATAACCAATGGAAGGAACAGCTTTACTAGCTAAATGAATTAATATTTAGGTTGATA
ACTCTTTCTGCACTATTAAATTGAAAACTTCGAACTAGGGTATAATACCCCAAAAAAAAT
GTGCGCAACATTTCAGCACATTTGGATAAAGTCATTTTTGGCGAAGTATAACAAATATTT
TGGCAAAACATTTGAGAAGTGTAGGTAGTGCTTGGTATTGACATCAGACTTAAATGCTAT
TTAACTGTTACAATGCTAGGACCATCTTCAAGAGTCTAAAATTCACTCTCTAAATCATCA
TTTGAAGATGAGGGGATTTTTTTTTTTTTGACCATAGCCTGAAATTCGCTCCCACGGGGA
GTCGAACCCAAGACCTCAGGAGTGCTGCTCAGACCACCTAACCAACTCGGATAGAAGTCC
TTTCGCTATCCTGTGCGTACTCTAGAGAGCTATTCTCACTCTCTATCTTTAGCTAGCGAG
AAATTCGGAATAGAGGATGACCACATTTGGATAACTAATTAAACAAGCTGTTGGAGGGTA
TTTTTCTATCAAAATTTCTTGTCCTAATAATTAGGAATTATATAGTCTTCTAGACTTGCT
CTAATATTGGTAATAGTCACTGATTTTATTTCTTGATCCATAGCTTTGCGCTGCACTAAA
CGTCAGTAAAAGAAGTGTGGATAGGGACCTTGATGTTTACCGCAACATACTCTCAAAGTT
GGTTCAAGCCAAGGAACTTCTCAAGGAATACGTGGATAGGGAAAAGAAGAAGAGAGAAGA
AAGATCGGAAGCCCCGAAGCCGAACGAAGCTGTCACAAAATTTGATGGAAACCTTTATTC
CACAAGGCATTAGAATCAGCCCTTTGCAGAGGAGAGTTTCCCAGGATAACAGAATTAACA
GTAACATCTGGACCGTGTTGAGAAACCACCAAATGTTCCCCTTTCATCACAGACGTCTTT
GGCTGCTCGTCTTGTGATGTAGCATTCTGCCGTACAAAAGGATCCAGATTATTCTTACTA
CTGGACAGATATTTGTATTTTCTCATATGTCTTGAAATCAAATGTATACATTTTCTGTGT
GTAGGGGTCAATGTTACTCAAGCAGAGAAATATAGTTTTCTCTTTTGTATTTAAATTCAG
GTAATTTGGGAGGCCGTGTTCACTTATATATAATATAGTGTGGC