Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021754_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:7:162292459:162298976:1 gene:Zm00001d021754 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific demethylase JMJ25
Sequence	ATGCCGCCGCGCCGCGGTAGAAGGAAGGGGAAGGGCAGGGCAAAGCCAAGAGCGAAGGCC ACCGAGCCCGAGCCTGAGCTAGAGGAAGCCGCCGATTCCGAGATCGAGGCGGGGGACGCG AAGGCGGAGGAGTCCGGCGAAGCGAAAGAAGATGAATCGGCAAGCGACGCCGAGTCCATG GATGCAGATGCCAACGAGGAAGCCGTCGAGAACGGAGCGGATGAGATGGATGCGGAGCCT GAAGCCAAAGCCGAGCCGGAAGCGGTAGCCACCGAGGCGGAAGCGAAACCTGACGTCTCG GATGCCGAGGATGAAGAAGCCGGTGAAACGTGCTCCGACCGCGAAGCAGATGCCAAGGAT GTTGATTCGAAGGCCAAAGCGGAGGAGTCCGACGGCGAGGATGAGGAGGGAGCCACCGCC GAGACCGACGGCGAGAGTGAAGAGGAAGCCGCTGAGACGGGCGGCGAGAACGAAGAAGAT GGTGGGGACTCCGACACCGAAGGTGATGCTGAGGAATCCCCTCCACCCCCTCCTTCCCGC AGCCGCCGCCGTAAGCGAGCGGCCACTCCCGATGATGAAGCAGAGGAGACCCCTACACCG TCGCGTCGCCGGCGCCGTCGGAAGTCGAGGCAGCGTGGTGACTCTCCGCCGCCACTTCCG GACCACCTCCGTTGCCGTCGTAGCGACGGGAAGAAGTGGCGCTGCTCGGGCCGTGCACTC CCAACTGTTAGCTTCTGCGAATACCACTACGCGAGGGCCAACAAGGGCAAGAAGCTACCA GCGGATGGAGAGCTCCTTGCTGTCGCTCTTCAGAGGCAGAAGAACAAGAGGAAGGGCAGG AGGAGAATCAATCCGTCGACGTCCCCTCAGGCAGCCACGAGTGACCGCCAGACCAGGGAT CTCCCAAACGGACTGATGACGATCTTGCCAGGTAGCAGTGGACCTGCAGCACTGTCAACT CCTGTTACTACAAAAGTTGGTGTAGAAATTTCTGCACCGATGCAGCGGTGCTATCGATCC AAGAATGCTGAGCCATTGCCTGTTGGTCCTGTGAAGGTTGTTCCTCGTGCTATGAGTATG ACGAAAGCAGCACCAAGAATGTGTCACTGCTGCGGGGTAAAGAAGGCAGCGCGTGTTGCC AATTGCAAGAACTGTGATACGAATTTCTGTAACAGCTGCATTAATAAATGGTATTCTAAG TTGTCCAGGAAGGATATAAAGGCTCGTTGTCCAGCTTGCCGTGGTCTCTGCAATTGTAAA CTGTGCAGCCTTGGTCATACCAAGGGTGCTACTCATAAGGAACCGCCAAGTGGTGAAAGG AAGATACTCAGCATAAAAATTTCCAACCATCAATTTTACAAGCTTTTACCTGTAAAACTT GACCGGGAGCAACTTGACGAGTTGGAATTAGAAGCTAAAATACAAGGAACAAAAACATCT AATGTCCGTGTCCAGGTTGCTGAAAATGGTCAGAGTGAGTCACTCTACTGTAATAACTGT AAGCTCTCTGTGAGTCAATTCTTGAGATGCTGCCCAACATGCCCGTTTAAGCTGTGCCTA AGTTGCTGTCAGAAGATACGTCAAGGAAACATGTCGAACAGCAACCCTGAAGATAAGTTC AAGAACCGGTTGCTTCAACAAGAGTCTGTCCATGAGGATGGCAGCATTACTTGCCCTTCG ATTGAGCTGGGTGGCTGCGGTGACGCCATGCTGAACCTGATATATGCATCTCCATCGAGC CAGTCTGAAGAGCTCAGTTCAGAATGTGAGCTGGATGCTGCAGGCAATCATTCTGGAGTG AAGGATGCTGAAGTTCACGGATCACCTGTACCTGAGAGTAATGGAAGATTAGCAGCAGCT TCCCAGGCAGAAACAATGTCCACATAG

Peptide Sequence

PEP ID	Zm00001d021754_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:7:162292459:162298976:1 gene:Zm00001d021754 transcript:Zm00001d021754_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific demethylase JMJ25
Sequence	MPPRRGRRKGKGRAKPRAKATEPEPELEEAADSEIEAGDAKAEESGEAKEDESASDAESM DADANEEAVENGADEMDAEPEAKAEPEAVATEAEAKPDVSDAEDEEAGETCSDREADAKD VDSKAKAEESDGEDEEGATAETDGESEEEAAETGGENEEDGGDSDTEGDAEESPPPPPSR SRRRKRAATPDDEAEETPTPSRRRRRRKSRQRGDSPPPLPDHLRCRRSDGKKWRCSGRAL PTVSFCEYHYARANKGKKLPADGELLAVALQRQKNKRKGRRRINPSTSPQAATSDRQTRD LPNGLMTILPGSSGPAALSTPVTTKVGVEISAPMQRCYRSKNAEPLPVGPVKVVPRAMSM TKAAPRMCHCCGVKKAARVANCKNCDTNFCNSCINKWYSKLSRKDIKARCPACRGLCNCK LCSLGHTKGATHKEPPSGERKILSIKISNHQFYKLLPVKLDREQLDELELEAKIQGTKTS NVRVQVAENGQSESLYCNNCKLSVSQFLRCCPTCPFKLCLSCCQKIRQGNMSNSNPEDKF KNRLLQQESVHEDGSITCPSIELGGCGDAMLNLIYASPSSQSEELSSECELDAAGNHSGV KDAEVHGSPVPESNGRLAAASQAETMST

Transcript Sequence

Transcript ID	Zm00001d021754_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:162292459:162298976:1 gene:Zm00001d021754 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific demethylase JMJ25
Sequence	GAGCCAGTACACGCACCACTTCCCCCCTTCGATCTAGCCATCCCAACTCCGCCGACTCGC TGGAACCCTAGCCAGCCGCCGCCATGCCGCCGCGCCGCGGTAGAAGGAAGGGGAAGGGCA GGGCAAAGCCAAGAGCGAAGGCCACCGAGCCCGAGCCTGAGCTAGAGGAAGCCGCCGATT CCGAGATCGAGGCGGGGGACGCGAAGGCGGAGGAGTCCGGCGAAGCGAAAGAAGATGAAT CGGCAAGCGACGCCGAGTCCATGGATGCAGATGCCAACGAGGAAGCCGTCGAGAACGGAG CGGATGAGATGGATGCGGAGCCTGAAGCCAAAGCCGAGCCGGAAGCGGTAGCCACCGAGG CGGAAGCGAAACCTGACGTCTCGGATGCCGAGGATGAAGAAGCCGGTGAAACGTGCTCCG ACCGCGAAGCAGATGCCAAGGATGTTGATTCGAAGGCCAAAGCGGAGGAGTCCGACGGCG AGGATGAGGAGGGAGCCACCGCCGAGACCGACGGCGAGAGTGAAGAGGAAGCCGCTGAGA CGGGCGGCGAGAACGAAGAAGATGGTGGGGACTCCGACACCGAAGGTGATGCTGAGGAAT CCCCTCCACCCCCTCCTTCCCGCAGCCGCCGCCGTAAGCGAGCGGCCACTCCCGATGATG AAGCAGAGGAGACCCCTACACCGTCGCGTCGCCGGCGCCGTCGGAAGTCGAGGCAGCGTG GTGACTCTCCGCCGCCACTTCCGGACCACCTCCGTTGCCGTCGTAGCGACGGGAAGAAGT GGCGCTGCTCGGGCCGTGCACTCCCAACTGTTAGCTTCTGCGAATACCACTACGCGAGGG CCAACAAGGGCAAGAAGCTACCAGCGGATGGAGAGCTCCTTGCTGTCGCTCTTCAGAGGC AGAAGAACAAGAGGAAGGGCAGGAGGAGAATCAATCCGTCGACGTCCCCTCAGGCAGCCA CGAGTGACCGCCAGACCAGGGATCTCCCAAACGGACTGATGACGATCTTGCCAGGTAGCA GTGGACCTGCAGCACTGTCAACTCCTGTTACTACAAAAGTTGGTGTAGAAATTTCTGCAC CGATGCAGCGGTGCTATCGATCCAAGAATGCTGAGCCATTGCCTGTTGGTCCTGTGAAGG TTGTTCCTCGTGCTATGAGTATGACGAAAGCAGCACCAAGAATGTGTCACTGCTGCGGGG TAAAGAAGGCAGCGCGTGTTGCCAATTGCAAGAACTGTGATACGAATTTCTGTAACAGCT GCATTAATAAATGGTATTCTAAGTTGTCCAGGAAGGATATAAAGGCTCGTTGTCCAGCTT GCCGTGGTCTCTGCAATTGTAAACTGTGCAGCCTTGGTCATACCAAGGGTGCTACTCATA AGGAACCGCCAAGTGGTGAAAGGAAGATACTCAGCATAAAAATTTCCAACCATCAATTTT ACAAGCTTTTACCTGTAAAACTTGACCGGGAGCAACTTGACGAGTTGGAATTAGAAGCTA AAATACAAGGAACAAAAACATCTAATGTCCGTGTCCAGGTTGCTGAAAATGGTCAGAGTG AGTCACTCTACTGTAATAACTGTAAGCTCTCTGTGAGTCAATTCTTGAGATGCTGCCCAA CATGCCCGTTTAAGCTGTGCCTAAGTTGCTGTCAGAAGATACGTCAAGGAAACATGTCGA ACAGCAACCCTGAAGATAAGTTCAAGAACCGGTTGCTTCAACAAGAGTCTGTCCATGAGG ATGGCAGCATTACTTGCCCTTCGATTGAGCTGGGTGGCTGCGGTGACGCCATGCTGAACC TGATATATGCATCTCCATCGAGCCAGTCTGAAGAGCTCAGTTCAGAATGTGAGCTGGATG CTGCAGGCAATCATTCTGGAGTGAAGGATGCTGAAGTTCACGGATCACCTGTACCTGAGA GTAATGGAAGATTAGCAGCAGCTTCCCAGGCAGAAACAATGTCCACATAGTCTCAGAAGA TGCAATTCTTGTTGGCTCATCTTTCAGGTGGGAGCGCAAGCGTTTATATTACATTGAAGC CTGAAGATAGTGTATGATATGGTCAAAAATCGGTAGAGGGTAGGTTGCCTGATTAGGTTG CTTGATTTAGGAGGTTGCCAGCCTATATGGCCATTGATTTTAGGCCTGTGACCTGGGGAT AATCCCAATTGTTGTATTGTTCATCTTTGACCAGGGAGCGAACATCGTTGTACATATGGT TATGGCTTTATTTTTGTCATTACCGAGGGGCGAGAGCTGATGAATGGTTGTACTGTCGTT CGTTCAAGGGATTACCTGGCTATTTTGTGGTACCGTCAGTGCTCAGTATTCGGTACTCGG TAGCACTTGATCGTACTATTATTTGTCATGTGAGGCTAGTGTTCTAACATTGGCCATTGT GACTCGATTGTGAAAGCATTAC