Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021741_T062
CDS Infomation

cds chromosome:B73_RefGen_v4:7:161991889:161997146:1 gene:Zm00001d021741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4G
Sequence

ATGAATGGGCTACCGCAATTTCCTGCCAGGACAAGCTCAGCTCCTCCAAATTTGGATGAA
CAAAAACGTAATCAGGCACTTGTGGAGGAACTTAAGGTTACACCTGCCCCTGTGCAACCA
GCTCTGAAACAGCAGCAGTTGCAGCAGCAGCCACAGCTGCCGCCACAGCTGCCGCCGCAG
CAGGTTCCCCAGCAGCCACAGCAGCAGTCAGCAAGAAAGGAAGCTGTTGGTTCCAGCCAA
CATAACTCCATCAATCCCCATATTACATCGCAATTGAAAAGAGATGTGCACCCATCTCCA
TCTGTCCCTAATGTTACATCTCTTAGACCTACCGTTCAAATTCCTGGTGTTCAGATGCCG
ATCCCCTTCCATCACCAGCCGGCACAAGTTTCCTTGCAGTTTGGTGGTCATGGGGCACAA
CTGCAGCCTCAAGTCGTGCCTAGCTCATATCAAATGTCAATGGGATTGACAGGCAGTAGT
ACACAAGTCCCACAGCAGCTGTATGCCCCTACTCTGCAGCATCATCAATTGCAACAGCAA
GCAATGATGCATCCTGGCCAGGGTATGGGTTATGTTCCTTCCGTTGCTCACCAATTCCCA
CAGTTGGGAAACATTCCTATGAACATCGCATCACAATATGCTCAGCAACAGCCAAACACG
CATGCTGCTGCACGTAAGACTACTGTAAAAATTACTCATCCAGACACTCATGAAGAGTTG
AAGCTCGATAAGAGGATGGACTCTTCTGGGCAGAGAGCTGCACCGAGCTTGACACAACAA
TCCCAGCCCGTTGGTAATTATGCTCCTCATATTGGCTTCTTTCATCAGCCACAGAGTTCC
TACAATCAGTCAGGAATGTATTACCCTACTACAGCTGGTGTGAACCAGGTTGCTACTGGA
TCTTCAGGTCCTAGATATAATTATCCTGTCACTCAGTCTGGGCAAGCGATGACATATATC
AGTCCATCTGCAGTGCCTCCGGTATCTGCTCAGTCCCAATATACAGTTAAACCGCACCCT
ATTGGGTTGGTGACTGAAAAATCTAGTACTCATGTCACAATAAGTGCTCCACCAGCTAAA
TCTGAGCCTCCTAAGTTACGTGCTGCTGAGGATTCTGCGTCAAGTCGGCAAAAGGATAAT
GAAATTGTTTCTGGGATCGCTGTTTCTAGTAAATCAATCCTTGAGAAGGAGGAGAGTAAC
GATCCTTTAGTCACAGTGAAGCATTCGACTGTAATAAGCCCGTCCTTGCCAATTCATGGT
GCAAAATCACAAACTTCAGTGACATCATCTCCTGTTGTGAATTCAGTCTCACCTGTGGCA
GGAGTTGATGGAAAAAGCATAGAATCTATTCAAAGGACTGGATCATTTAATGATAACAAG
AAAATTGTCACTAAAAAGGATGTCAGGATTTCATCTGAACCACCGAATTCAGCTTCATCT
GTTGAAGATAAGGTGCAAACTGTAAAGGCTGGAGGCAGTGATCACCAGGAAACTAACAAC
CTGAACAATGAGTTGGATTTGGCCAGCTCATCTTCATGCTCAACGGTTCCACTGGCAGTA
ATTTCAGTGAATGCTAACAGCACAGCAGTAACTGCTGCTGATGTTCCTGGGACAGATAGA
AGCTCAAGAAGACCATCTCCCGAGGGTACTGGTGAGCCTGCAGTAGAAAGCTTCACTGTT
TTGGCTGTTGAATGTGACAAAAGGAAGCGGACTGATGAAGTTGCGACAGATCCTAGCAAG
GATAATATTTCTTCTGATGCTACCAAACATGAATTGCCTGATGCATGTGCAGTGGACCCT
ACTGAACAGGCATCAGCAGTGACTTCTAATACTGATGATTCATATGCATCCCCTATAGTA
AATAATCAGGAGCAGTTGCTGAAAGAGTCTGCTCCATCTGCTTCTGAGGAACAAGCTATG
ATGAATAACTTTTCCAAGAATTCTGAGACTTCACATTTTCTTGATAGCAATGCTGTGGAA
GTGAGAACTGGAACTTCAGAGCCTACTGTTCAAAGTTCCAATGACGAAGGTGACTCGGAT
ATTAGTCCAGAAACAGACCTAGCTGTTTGCAATGTTCCTCTAGTTTCATCTGAGGGACAA
CTGAAATCTGAGAGTAGGGCTGATGATCAACAGGCTGCTGAACCAACAGTTTCAGTTCGA
TCAGTATCCAGGGAAAAGCCTAGTGTTGAGATCGCCAGGTAG

Peptide Sequence

PEP ID

Zm00001d021741_P062
PEP Infomation

pep chromosome:B73_RefGen_v4:7:161991889:161997146:1 gene:Zm00001d021741 transcript:Zm00001d021741_T062 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4G
Sequence

MNGLPQFPARTSSAPPNLDEQKRNQALVEELKVTPAPVQPALKQQQLQQQPQLPPQLPPQ
QVPQQPQQQSARKEAVGSSQHNSINPHITSQLKRDVHPSPSVPNVTSLRPTVQIPGVQMP
IPFHHQPAQVSLQFGGHGAQLQPQVVPSSYQMSMGLTGSSTQVPQQLYAPTLQHHQLQQQ
AMMHPGQGMGYVPSVAHQFPQLGNIPMNIASQYAQQQPNTHAAARKTTVKITHPDTHEEL
KLDKRMDSSGQRAAPSLTQQSQPVGNYAPHIGFFHQPQSSYNQSGMYYPTTAGVNQVATG
SSGPRYNYPVTQSGQAMTYISPSAVPPVSAQSQYTVKPHPIGLVTEKSSTHVTISAPPAK
SEPPKLRAAEDSASSRQKDNEIVSGIAVSSKSILEKEESNDPLVTVKHSTVISPSLPIHG
AKSQTSVTSSPVVNSVSPVAGVDGKSIESIQRTGSFNDNKKIVTKKDVRISSEPPNSASS
VEDKVQTVKAGGSDHQETNNLNNELDLASSSSCSTVPLAVISVNANSTAVTAADVPGTDR
SSRRPSPEGTGEPAVESFTVLAVECDKRKRTDEVATDPSKDNISSDATKHELPDACAVDP
TEQASAVTSNTDDSYASPIVNNQEQLLKESAPSASEEQAMMNNFSKNSETSHFLDSNAVE
VRTGTSEPTVQSSNDEGDSDISPETDLAVCNVPLVSSEGQLKSESRADDQQAAEPTVSVR
SVSREKPSVEIAR

Transcript Sequence

Transcript ID

Zm00001d021741_T062
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:161991889:161997146:1 gene:Zm00001d021741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4G
Sequence

GCCAGCGAGAAACCGGCTAATCCGCCGTTACCACTACCGAAAGCTACACATGCTGCTCCA
AGGGCTCTACCAAAAAACTCTAACACAGCGCTTCCTCAGGGAGGATCGCAAGGAGAACCA
TCAAAGGGGTTTAACTTTCAGTTTGGTAGTATAAATATGAATGGGCTACCGCAATTTCCT
GCCAGGACAAGCTCAGCTCCTCCAAATTTGGATGAACAAAAACGTAATCAGGCACTTGTG
GAGGAACTTAAGGTTACACCTGCCCCTGTGCAACCAGCTCTGAAACAGCAGCAGTTGCAG
CAGCAGCCACAGCTGCCGCCACAGCTGCCGCCGCAGCAGGTTCCCCAGCAGCCACAGCAG
CAGTCAGCAAGAAAGGAAGCTGTTGGTTCCAGCCAACATAACTCCATCAATCCCCATATT
ACATCGCAATTGAAAAGAGATGTGCACCCATCTCCATCTGTCCCTAATGTTACATCTCTT
AGACCTACCGTTCAAATTCCTGGTGTTCAGATGCCGATCCCCTTCCATCACCAGCCGGCA
CAAGTTTCCTTGCAGTTTGGTGGTCATGGGGCACAACTGCAGCCTCAAGTCGTGCCTAGC
TCATATCAAATGTCAATGGGATTGACAGGCAGTAGTACACAAGTCCCACAGCAGCTGTAT
GCCCCTACTCTGCAGCATCATCAATTGCAACAGCAAGCAATGATGCATCCTGGCCAGGGT
ATGGGTTATGTTCCTTCCGTTGCTCACCAATTCCCACAGTTGGGAAACATTCCTATGAAC
ATCGCATCACAATATGCTCAGCAACAGCCAAACACGCATGCTGCTGCACGTAAGACTACT
GTAAAAATTACTCATCCAGACACTCATGAAGAGTTGAAGCTCGATAAGAGGATGGACTCT
TCTGGGCAGAGAGCTGCACCGAGCTTGACACAACAATCCCAGCCCGTTGGTAATTATGCT
CCTCATATTGGCTTCTTTCATCAGCCACAGAGTTCCTACAATCAGTCAGGAATGTATTAC
CCTACTACAGCTGGTGTGAACCAGGTTGCTACTGGATCTTCAGGTCCTAGATATAATTAT
CCTGTCACTCAGTCTGGGCAAGCGATGACATATATCAGTCCATCTGCAGTGCCTCCGGTA
TCTGCTCAGTCCCAATATACAGTTAAACCGCACCCTATTGGGTTGGTGACTGAAAAATCT
AGTACTCATGTCACAATAAGTGCTCCACCAGCTAAATCTGAGCCTCCTAAGTTACGTGCT
GCTGAGGATTCTGCGTCAAGTCGGCAAAAGGATAATGAAATTGTTTCTGGGATCGCTGTT
TCTAGTAAATCAATCCTTGAGAAGGAGGAGAGTAACGATCCTTTAGTCACAGTGAAGCAT
TCGACTGTAATAAGCCCGTCCTTGCCAATTCATGGTGCAAAATCACAAACTTCAGTGACA
TCATCTCCTGTTGTGAATTCAGTCTCACCTGTGGCAGGAGTTGATGGAAAAAGCATAGAA
TCTATTCAAAGGACTGGATCATTTAATGATAACAAGAAAATTGTCACTAAAAAGGATGTC
AGGATTTCATCTGAACCACCGAATTCAGCTTCATCTGTTGAAGATAAGGTGCAAACTGTA
AAGGCTGGAGGCAGTGATCACCAGGAAACTAACAACCTGAACAATGAGTTGGATTTGGCC
AGCTCATCTTCATGCTCAACGGTTCCACTGGCAGTAATTTCAGTGAATGCTAACAGCACA
GCAGTAACTGCTGCTGATGTTCCTGGGACAGATAGAAGCTCAAGAAGACCATCTCCCGAG
GGTACTGGTGAGCCTGCAGTAGAAAGCTTCACTGTTTTGGCTGTTGAATGTGACAAAAGG
AAGCGGACTGATGAAGTTGCGACAGATCCTAGCAAGGATAATATTTCTTCTGATGCTACC
AAACATGAATTGCCTGATGCATGTGCAGTGGACCCTACTGAACAGGCATCAGCAGTGACT
TCTAATACTGATGATTCATATGCATCCCCTATAGTAAATAATCAGGAGCAGTTGCTGAAA
GAGTCTGCTCCATCTGCTTCTGAGGAACAAGCTATGATGAATAACTTTTCCAAGAATTCT
GAGACTTCACATTTTCTTGATAGCAATGCTGTGGAAGTGAGAACTGGAACTTCAGAGCCT
ACTGTTCAAAGTTCCAATGACGAAGGTGACTCGGATATTAGTCCAGAAACAGACCTAGCT
GTTTGCAATGTTCCTCTAGTTTCATCTGAGGGACAACTGAAATCTGAGAGTAGGGCTGAT
GATCAACAGGCTGCTGAACCAACAGTTTCAGTTCGATCAGTATCCAGGGAAAAGCCTAGT
GTTGAGATCGCCAGGTAGGAAGAAGAAAAAGGAAATGCTTGCTAAGGCTGATGCTGCTGG
GTCTTCAGATCTTTATAATGCATACAAGGGACCAGAAGAGAAGTCTGAAATGGTTGGTAC
TGCAGATGGTGCTGATAGTTCTTCAATAGTTGACACAACACATGTGCTGCTTGATGAAGC
AGAAAGGGATGTTAGTACGTTTGCAGATGATTGTAAGAAAAAAGTTGAGCTTGATGATTG
GGAAGATGCTGCAGACATGTCTACTCCAAAGCTGGCACCAGATTCTGGAAATCAGGCTGG
CACCACCCAAGTGCTAGATTCAGATACAAGTGAAGCAAACAGCAGGAAGAAATATTCACG
GGATTTTCTGTTGACCTTGCAACACCACTGTACTGGTCTTCCTGTTGGATTTCAGATGAA
TGAAGCTGTCAATGCAATAATGAATAATTTGGTTGGAAAGTCTTATGTTGTTGACCGGGA
ACCTTACCCTAGTCCTGGAAGGGGTTTGGACCGCCCAACTTCTCGTGGTGACCGCCGTGG
TGCTGCCATGACTGACGACAGGTGGACTAAGACGGGTGTTCCTCTCAGTCCTGGTCGTGA
TGTTCACATGGACCTGCCAAATGGAACATCAGTTGTCAACTACCGTAGCTCAGGAGGTAA
TCATGGTGTTTTAAGGAATCCACGTGGCCAACCATCAAATCAATATGGTGGTGGTCTTCT
TGCAGGACCTGTGCATTCTGTTGGGCCTCAAGTACCTCGCAGCGGCTCTGATTCTGATAG
ATGGCAGCAAAAGGGTCTCATGCCTTCCCCTGTCACACCCATGCAAACAATGCACAAAGC
AGAGAGGAAGTATGTTGTTGGGAAAGTTTCTGATGAGGAGGAGGCGAAACAGAGGCAGTT
GAAAGGCATTCTTAACAAGCTGACTCCACAAAACTTTGAAAAACTGTTTGAACAAGTTAA
GGAAGTCAACATTGACAGTGTAGCAACTCTTACTGGGGTCATTTCACAGATATTTGACAA
AGCTTTGATGGAACCAACTTTTTGTGAAATGTATGCTAATTTTTGCTTCCATCTGGCTGG
TGCCTTGCCTGACTTCAGTGAAGACAATGAAAAGATCACATTCAAAAGATTGCTTTTGAA
TAAATGCCAAGAGGAGTTTGAGAGAGGTGAAAGGGAAGAAGCTGAAGCTGATAAAACAGA
AGAGGAAGGTGAGATCAAACAGACCAAAGAAGAAAGAGAGGAAAAGAGAATCCGTGCTCG
AAGGCGCATGCTGGGAAACATTAGGTTAATCGGAGAGTTGTTCAAAAAGAAAATGTTGAC
AGAAAGGATTATGCATGAGTGCATTAAAAAATTGTTTGGAAATTGTGATGATCCCGATGA
GGAGAACATTGAAGCACTATGCAAATTGATGAGTACAATTGGTGAGATGATTGATCGTGC
AAAGGCAAAGGAGCACATGGATGCATATTTTGGTATGATGCATAAGATGTCAACAAGTCA
GAAGTTGTCTTCTCGTGTAAGGTTTATGTTGAGAGATTCAATTGACCTCAGGAGAAATAA
ATGGCAACAGAGGCGTAAAGTTGAAGGCCCCAAGAAGATTGAGGAGGTGCACAGAGATGC
AGCTCAAGAAAGACATGCTCAGTCAAGTAGGCTAGGACGTGGTCCAGCTGTTAGTTCTGT
TTCAAGAAGAGGAGCACCTTCTATGGATTATGGCTCTCGTGGCTCATCTGCGTTAGCATC
CTCAAGTTCCCAACAAGGGAGCATTCGTGGAATGCCTCCACACTCGCGTGGTTCACAAGA
CATCCGATATGAGGAGAGGAACCAGTTTGACAATAGAACTGTTCTTCCCCAGCGTGTAGT
CAAGGATGAAGCTATCACTCTTGGGCCACAAGGTGGCCTTGCTAGGGGTATGTCTATAAG
AGGGCTGTCACCAGCATCAAATACTGAACTTCCTTCTGTTATTGACCACCGGAGAATATT
ATCTGGTTCTAATGGTTATAACTCTGTGACTGATTGGACATCATCATCTGGAAGAGAAGA
TTCTAGCTCAATAATTCCAGATCGAACCTCTGGCCGAACTTCTGCTTCTAGTCAATCTGC
TGGACCTTCACAGAGGCCTGCCAGCCAGGAAGGCCGTCCAGGAAGTAAATCATATTCTGA
GGATGAATTGAGAGAAAAATCTGTTTTGGCCATTCGGGAATATTACAG