Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021731_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:161606806:161611416:-1 gene:Zm00001d021731 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase-like protein D3
Sequence

ATGGCTCCTAAGGCGCCGGCGAATAATGGCGCTGTCGTCGTTGCCGGCGGCCATCACGGG
GGCAGCACCGACGTCGGCGGCGTTGCCGGGGGCGCGACGACGACGACTGTGCCGACGTCT
GTGGCGGCGAACGGCAACGGCAAGCAGCACGGCACGAGGAAGCAGAGGAGGCCTGCAGCG
GTAGTCGTCAGCCCGATGGACAAGTACTGGACGCCCGTCGACGACAAGGAGGCGGCGGAG
GCCGTCGACGACGGCGGCGAGGACGGGCGGCGCCCGCTCCTGTTCCGGACGTACAAGGTC
AAGGGAATCCTCCTGCACCCCTATAGGTTGTTGACCTTGCTGAGATTGATTGCAATCATC
CTATTCTTCATATGGCGTATCCGGCATCCGCATGCCGACGGAATGTGGCTCTGGTGGATA
TCCATTGTCGGAGATTTCTGGTTTGGTGTCACTTGGTTGCTAAACCAAGTTGCGAAGCTC
AACCCTACCAAGCGTGTCCCAGACCTTTCCCTCTTGAGACAACAGTTCGATCTCCCTGAT
GGCAACTCTAATCTCCCTAGGCTTGATGTTTTTATCAACACCGTCGATCCCATAAACGAG
CCTATGATATACACCATGAACTCTATCCTGTCCATTCTTGCCGTAGACTACCCAATCGAT
AGGACTGCTACCTACCTCTCGGATGATGGAGGGTCCATAATCCATTACGAGGGCTTGCTT
GAGACAGCAAATTTCGCGACACTCTGGGTTCCATTTTGCCGAAAACATAGCATTGAGCCG
AGAGCCCCTGAGAGCTATTTTGCTGTGAAGTCGCGCCCATACACTGGAAATGTACCAGAT
GAGTTTGCTGATGATCATAGACGCATGTCTAAGGAGTATGATGAGTTCAAGGTGCGTTTG
GATGCACTTTTTACTAAAATCCCTGAACGCTCAGATGCACACAATGCAGAGGCCAAGGAA
GGTGTAAAGGCAACCTGGATGGCAGACGGAACACAGTGGCCAGGAACATGGTTTGACCCT
GCTGAAAACCACAAGAAAGGGCAACATGCTGGAATTGTTAAGGTTATGTTGAATCACCCG
GGCGATGAACCTCGGTTTGGTGGACCAGCAAGTGCTGAAACCCCTCTGGACTTCAGTGCC
GTTGACGTGCGGCTCCCAATGCTCGTCTATATCTCCCGTGAGAAGAGTCCAAGCCATGAC
CACCAAAAGAAAGCAGGCGCCATGAACGTGCAGCTGCGGATCTCTGCGCTTCTGACCAAC
GCTCCCTTCATCATCAATTTTGATGGTGACCACTACGTCAACAACTCACAGGCCTTCCGA
GCTGCGATGTGCTTCATGCTGGACCGGCGGGATGGCGAGAACACCGCTTTTGTTCAGTTC
CCGCAACGCTTTGACGATGTCGACCCAACAGACAGGTACTGCAATCACAACCGTGTCTTC
TTTGATGCCACCTTGCTCGGCCTAAATGGCATCCAGGGACCCTCCTATGTTGGCACCGGT
TGCATGTTCCGCCGGATCGCTGTCTATGGTATTGATCCACCTCGTTGGAGAACTGATGCC
TTCAAGCTTGTGGACAACCCCAGCAAGTTTGGCAGCTCAATGCTCTTCATCAACTCCATA
CCATCGGCTGCGAACCAAGAATGGTCCATGGCGTCACCACCGGCACATGAGGAGTCGGTC
ATGGAAGAGCTGAATAATGTCATGAAGTGCGCATATGAAGAGGGCACTGAGTTCGGAAAG
GAAATCGGCTGGGTGTACAACATTGCTACGGAGGACGTGGTGACCGGCTTCCGAGTACAC
CGGACAGGGTGGCGATCTATGTACTGCCGCATGGAGCCGGATGCCTTCCGTGGCACTGCA
CCAATCAACCTCACGGAGCGCCTCTGCCAGATCCTGCGCTGGTCGGGCGGCTCCCTTGAA
ATGTTCTTCTCACACTGCCCGCTCCTTGCTGGCCGTCGACTGAACTTGATGCAACGGATC
GCCTACACCAACATGACAGCCTACCCAATCTCATCGGTCTTCCTTGTGTTCTACCTCCTC
TTCCCCGTCATATGGATCTTCCGTGGCGAGTTCTACATCCAGAAGCCGTTCCCGACATAC
GTGCTGTACCTCGTCGTCATCATAGCAATGACAGAGCTGATCGGCATGGTGGAGATCAAG
TGGGCAGGCCTCACGCTGCTGGACTGGATCCGCAACGAGCAGTTCTACATCATCGGGGCG
ACAGCCGTGTACCCGTTAGCGACGCTGCACATCGTGCTGAAGCTAGTCCTTCGCGGGAAC
GGCGTTTCGTTCAAGCTGACGGCGAAGCAGGCTACGAGCGCCGTGAACGAGAAGTACGCT
GAGATGTACGTGGTGCAGTGGACGCCACTGCTGATCCCCACAATAGCGGTGATCGCCGTG
AACGTCGGCGCGATCGGGGCGGCGATCGGCAAGGCGGTCGTCGGGGGGTGGTCGCTCCTG
CAGATGGCCGACGCGTCCCTTGGACTGGTGTTCAACGCGTGGATCCTGCTGCTGATCTAC
CCGTTCGCGCTCGGGGTGATGGGGCGGTGGAGCAAGAGGCCCTATATCCTGTTCGTCCTG
TTCATGATTGGGTTCGCTGTAGTGGCGGCGGTGGTTGTTGCCATCCATGCTGCGCGCACT
GGTTCTGTTCGGTTCCATTCCGGACATTCAGGCGGTGCTAGCTTCCCTACAAGCTGGGGG
TTTTAG

Peptide Sequence

PEP ID

Zm00001d021731_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:161606806:161611416:-1 gene:Zm00001d021731 transcript:Zm00001d021731_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase-like protein D3
Sequence

MAPKAPANNGAVVVAGGHHGGSTDVGGVAGGATTTTVPTSVAANGNGKQHGTRKQRRPAA
VVVSPMDKYWTPVDDKEAAEAVDDGGEDGRRPLLFRTYKVKGILLHPYRLLTLLRLIAII
LFFIWRIRHPHADGMWLWWISIVGDFWFGVTWLLNQVAKLNPTKRVPDLSLLRQQFDLPD
GNSNLPRLDVFINTVDPINEPMIYTMNSILSILAVDYPIDRTATYLSDDGGSIIHYEGLL
ETANFATLWVPFCRKHSIEPRAPESYFAVKSRPYTGNVPDEFADDHRRMSKEYDEFKVRL
DALFTKIPERSDAHNAEAKEGVKATWMADGTQWPGTWFDPAENHKKGQHAGIVKVMLNHP
GDEPRFGGPASAETPLDFSAVDVRLPMLVYISREKSPSHDHQKKAGAMNVQLRISALLTN
APFIINFDGDHYVNNSQAFRAAMCFMLDRRDGENTAFVQFPQRFDDVDPTDRYCNHNRVF
FDATLLGLNGIQGPSYVGTGCMFRRIAVYGIDPPRWRTDAFKLVDNPSKFGSSMLFINSI
PSAANQEWSMASPPAHEESVMEELNNVMKCAYEEGTEFGKEIGWVYNIATEDVVTGFRVH
RTGWRSMYCRMEPDAFRGTAPINLTERLCQILRWSGGSLEMFFSHCPLLAGRRLNLMQRI
AYTNMTAYPISSVFLVFYLLFPVIWIFRGEFYIQKPFPTYVLYLVVIIAMTELIGMVEIK
WAGLTLLDWIRNEQFYIIGATAVYPLATLHIVLKLVLRGNGVSFKLTAKQATSAVNEKYA
EMYVVQWTPLLIPTIAVIAVNVGAIGAAIGKAVVGGWSLLQMADASLGLVFNAWILLLIY
PFALGVMGRWSKRPYILFVLFMIGFAVVAAVVVAIHAARTGSVRFHSGHSGGASFPTSWG
F

Transcript Sequence

Transcript ID

Zm00001d021731_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:161606806:161611416:-1 gene:Zm00001d021731 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cellulose synthase-like protein D3
Sequence

GCTCTGCTCAGTTCTCAGTGCTGCATGCACCGAGCAAGTGAGCTATAGCTACCGACCAGC
AGCCCAGCTAATTCAGTCTCTACTAGCAGAGCTAGTAGCCAGCTGCCTGCCACTGACTGA
TCATCGCGTCGACCAGAGCATGGCTCCTAAGGCGCCGGCGAATAATGGCGCTGTCGTCGT
TGCCGGCGGCCATCACGGGGGCAGCACCGACGTCGGCGGCGTTGCCGGGGGCGCGACGAC
GACGACTGTGCCGACGTCTGTGGCGGCGAACGGCAACGGCAAGCAGCACGGCACGAGGAA
GCAGAGGAGGCCTGCAGCGGTAGTCGTCAGCCCGATGGACAAGTACTGGACGCCCGTCGA
CGACAAGGAGGCGGCGGAGGCCGTCGACGACGGCGGCGAGGACGGGCGGCGCCCGCTCCT
GTTCCGGACGTACAAGGTCAAGGGAATCCTCCTGCACCCCTATAGGTTGTTGACCTTGCT
GAGATTGATTGCAATCATCCTATTCTTCATATGGCGTATCCGGCATCCGCATGCCGACGG
AATGTGGCTCTGGTGGATATCCATTGTCGGAGATTTCTGGTTTGGTGTCACTTGGTTGCT
AAACCAAGTTGCGAAGCTCAACCCTACCAAGCGTGTCCCAGACCTTTCCCTCTTGAGACA
ACAGTTCGATCTCCCTGATGGCAACTCTAATCTCCCTAGGCTTGATGTTTTTATCAACAC
CGTCGATCCCATAAACGAGCCTATGATATACACCATGAACTCTATCCTGTCCATTCTTGC
CGTAGACTACCCAATCGATAGGACTGCTACCTACCTCTCGGATGATGGAGGGTCCATAAT
CCATTACGAGGGCTTGCTTGAGACAGCAAATTTCGCGACACTCTGGGTTCCATTTTGCCG
AAAACATAGCATTGAGCCGAGAGCCCCTGAGAGCTATTTTGCTGTGAAGTCGCGCCCATA
CACTGGAAATGTACCAGATGAGTTTGCTGATGATCATAGACGCATGTCTAAGGAGTATGA
TGAGTTCAAGGTGCGTTTGGATGCACTTTTTACTAAAATCCCTGAACGCTCAGATGCACA
CAATGCAGAGGCCAAGGAAGGTGTAAAGGCAACCTGGATGGCAGACGGAACACAGTGGCC
AGGAACATGGTTTGACCCTGCTGAAAACCACAAGAAAGGGCAACATGCTGGAATTGTTAA
GGTTATGTTGAATCACCCGGGCGATGAACCTCGGTTTGGTGGACCAGCAAGTGCTGAAAC
CCCTCTGGACTTCAGTGCCGTTGACGTGCGGCTCCCAATGCTCGTCTATATCTCCCGTGA
GAAGAGTCCAAGCCATGACCACCAAAAGAAAGCAGGCGCCATGAACGTGCAGCTGCGGAT
CTCTGCGCTTCTGACCAACGCTCCCTTCATCATCAATTTTGATGGTGACCACTACGTCAA
CAACTCACAGGCCTTCCGAGCTGCGATGTGCTTCATGCTGGACCGGCGGGATGGCGAGAA
CACCGCTTTTGTTCAGTTCCCGCAACGCTTTGACGATGTCGACCCAACAGACAGGTACTG
CAATCACAACCGTGTCTTCTTTGATGCCACCTTGCTCGGCCTAAATGGCATCCAGGGACC
CTCCTATGTTGGCACCGGTTGCATGTTCCGCCGGATCGCTGTCTATGGTATTGATCCACC
TCGTTGGAGAACTGATGCCTTCAAGCTTGTGGACAACCCCAGCAAGTTTGGCAGCTCAAT
GCTCTTCATCAACTCCATACCATCGGCTGCGAACCAAGAATGGTCCATGGCGTCACCACC
GGCACATGAGGAGTCGGTCATGGAAGAGCTGAATAATGTCATGAAGTGCGCATATGAAGA
GGGCACTGAGTTCGGAAAGGAAATCGGCTGGGTGTACAACATTGCTACGGAGGACGTGGT
GACCGGCTTCCGAGTACACCGGACAGGGTGGCGATCTATGTACTGCCGCATGGAGCCGGA
TGCCTTCCGTGGCACTGCACCAATCAACCTCACGGAGCGCCTCTGCCAGATCCTGCGCTG
GTCGGGCGGCTCCCTTGAAATGTTCTTCTCACACTGCCCGCTCCTTGCTGGCCGTCGACT
GAACTTGATGCAACGGATCGCCTACACCAACATGACAGCCTACCCAATCTCATCGGTCTT
CCTTGTGTTCTACCTCCTCTTCCCCGTCATATGGATCTTCCGTGGCGAGTTCTACATCCA
GAAGCCGTTCCCGACATACGTGCTGTACCTCGTCGTCATCATAGCAATGACAGAGCTGAT
CGGCATGGTGGAGATCAAGTGGGCAGGCCTCACGCTGCTGGACTGGATCCGCAACGAGCA
GTTCTACATCATCGGGGCGACAGCCGTGTACCCGTTAGCGACGCTGCACATCGTGCTGAA
GCTAGTCCTTCGCGGGAACGGCGTTTCGTTCAAGCTGACGGCGAAGCAGGCTACGAGCGC
CGTGAACGAGAAGTACGCTGAGATGTACGTGGTGCAGTGGACGCCACTGCTGATCCCCAC
AATAGCGGTGATCGCCGTGAACGTCGGCGCGATCGGGGCGGCGATCGGCAAGGCGGTCGT
CGGGGGGTGGTCGCTCCTGCAGATGGCCGACGCGTCCCTTGGACTGGTGTTCAACGCGTG
GATCCTGCTGCTGATCTACCCGTTCGCGCTCGGGGTGATGGGGCGGTGGAGCAAGAGGCC
CTATATCCTGTTCGTCCTGTTCATGATTGGGTTCGCTGTAGTGGCGGCGGTGGTTGTTGC
CATCCATGCTGCGCGCACTGGTTCTGTTCGGTTCCATTCCGGACATTCAGGCGGTGCTAG
CTTCCCTACAAGCTGGGGGTTTTAGATCGCGTTCATCATTGGTTAGTGGCATTGGTTGCA
GGTTGTTCCATTAGCTGAGAGCTTCTTCGCTGTGGAGTTCCTACTTGATGTAAATCGTGC
ATTGATTGTACATGTTTGTTCAGTGGATGGTTTGTAAGGAACAAAAAATGGTGGTAAAGT
GAAAGCACATTTCTGCC