Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021702_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:160752742:160758067:1 gene:Zm00001d021702 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta amylase5 description:Beta-amylase
Sequence	ATGGCGGGGAACGCGCTAGCCAACTATGTCCAGGTCTACGTCATGCTCCCGCTGGATGTC ATCACTGTCGACAACACGTTCGAGAAGGAGGACGAGACGAGGGCGCAGCTGAAGAAGCTG ACGGAGGCGGGCGCCGACGGGGTCATGATCGACGTCTGGTGGGGGCTGGTGGAAGGGAAG GAGCCGGGAGTCTACGACTGGAGCGCCTACAGGCAGGTGTTCAAGCTGGTGCAGGAGGCC GGGCTGAAGCTGCAGGCCATCATGTCGTGCCACCAGTGCGGCGGCAACGTCGGCGACGTC GTCAACATCCCGATCCCGCAGTGGGTGCGGGACGTCGGCAAAAGCAACCCCGACATCTTC TACACCAACCGGAGTGGGCTGACGAACATCGAGTATCTCACGCTTGGAGTGGACGACCAG CCTCTCTTCCATGGGAGAACTGCCATTCAGCTGTATGCTGATTACATGAAGAGCTTCAGG GAGAACATGGCAGACTTCTTGGATGCTGGTGTCGTTGTGGACATTGAGGTGGGACTTGGC CCTGCTGGCGAGATGAGGTACCCATCGTATCCCCAGAGTCAGGGATGGGTGTTCCCAGGC GTTGGAGAATTCATATGCTATGATAAGTACCTGCAAGCAGACTTCAAAGCAGCAGCAGAA GAGGCTGGGCATCCTGAGTGGGATTTGCCTGATGATGCTGGGACGTACAATGACACTCCT GAGAAGACCCAGTTCTTCGCGGATAACGGAACATACCAGACCGACAAGGGGAAGTTCTTC CTCACATGGTACTCAAACAAACTGATCAAGCACGGTGATAAGATCTTGGACGAAGCAAAC AAGGTCTTCCTGGGATGCAAGGTGCAGCTGGCAATCAAAGTCTCTGGCATACACTGGTGG TACAACGTTCCAAACCATGCAGCTGAGCTCACTGCCGGATACTACAACTTAGATGACAGA GATGGCTACAGAACCATAGCACACATGCTCACAAGGCATCGTGCTAGCATGAACTTCACT TGTGCTGAGATGAGGGACAGTGAACAGAGTTCAGAGGCGAAAAGTGCACCTGAGGAACTG GTTCAACAGGTGCTGAGTGCTGGATGGAGAGAGGGCCTAAATTTGGCATGTGAAAATGCA CTCAACCGATATGATGCAACAGCTTACAACACCATCCTCAGGAATGCAAGACCTCAAGGC ATCAACAAGAATGGCCCTCCAGAACACAAGTTGCACGGATTCACCTACCTCCGAGTATCT GATGAACTGTTCCAGGAACAGAACTACACCACTTTCAAAACTTTTGTCAGGAGAATGCAT GCTAACCTGGATTATAATCCAAATGTCGATCCAGTTGCACCATTGGAAAGATCAAAGGCA GAGATACCAATTGAAGAAATCCTAGAAGTAGCACAGCCAAAATTGGAGCCATTTCCCTTC GACAAGGACACCGACCTACCAGTTTAA

Peptide Sequence

PEP ID	Zm00001d021702_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:160752742:160758067:1 gene:Zm00001d021702 transcript:Zm00001d021702_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta amylase5 description:Beta-amylase
Sequence	MAGNALANYVQVYVMLPLDVITVDNTFEKEDETRAQLKKLTEAGADGVMIDVWWGLVEGK EPGVYDWSAYRQVFKLVQEAGLKLQAIMSCHQCGGNVGDVVNIPIPQWVRDVGKSNPDIF YTNRSGLTNIEYLTLGVDDQPLFHGRTAIQLYADYMKSFRENMADFLDAGVVVDIEVGLG PAGEMRYPSYPQSQGWVFPGVGEFICYDKYLQADFKAAAEEAGHPEWDLPDDAGTYNDTP EKTQFFADNGTYQTDKGKFFLTWYSNKLIKHGDKILDEANKVFLGCKVQLAIKVSGIHWW YNVPNHAAELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSSEAKSAPEEL VQQVLSAGWREGLNLACENALNRYDATAYNTILRNARPQGINKNGPPEHKLHGFTYLRVS DELFQEQNYTTFKTFVRRMHANLDYNPNVDPVAPLERSKAEIPIEEILEVAQPKLEPFPF DKDTDLPV

Transcript Sequence

Transcript ID	Zm00001d021702_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:160752742:160758067:1 gene:Zm00001d021702 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta amylase5 description:Beta-amylase
Sequence	ATACAAGGCGTCAAAACCAAAGTTCTTCAGGACGCAGTCCCCGCGAATCACAATGGCAAC AACCTGCTGTGCTACATATGCCAGCTCGGGATGGTATCGATATCCAAAATCATCAGCTCA CCCTGCACATGCGCATTCCTGGGCGACTATACGGAAAGATAGGTTTTTGCATCGCTGGAG AAGCGCTGCAAAGTCGCATTCCAGATCTCCCCTGCCTCCGCTGTATAAATAGACCCTCAA GCTCCCTGCAACATCCATCAAGGCCCAAGCTCAGCGACCACCAAGCAGAGCAAGCCAGTG AGGTCTCTCAGAGCGTAGCCAGCCAGCTACAATGGCGGGGAACGCGCTAGCCAACTATGT CCAGGTCTACGTCATGCTCCCGCTGGATGTCATCACTGTCGACAACACGTTCGAGAAGGA GGACGAGACGAGGGCGCAGCTGAAGAAGCTGACGGAGGCGGGCGCCGACGGGGTCATGAT CGACGTCTGGTGGGGGCTGGTGGAAGGGAAGGAGCCGGGAGTCTACGACTGGAGCGCCTA CAGGCAGGTGTTCAAGCTGGTGCAGGAGGCCGGGCTGAAGCTGCAGGCCATCATGTCGTG CCACCAGTGCGGCGGCAACGTCGGCGACGTCGTCAACATCCCGATCCCGCAGTGGGTGCG GGACGTCGGCAAAAGCAACCCCGACATCTTCTACACCAACCGGAGTGGGCTGACGAACAT CGAGTATCTCACGCTTGGAGTGGACGACCAGCCTCTCTTCCATGGGAGAACTGCCATTCA GCTGTATGCTGATTACATGAAGAGCTTCAGGGAGAACATGGCAGACTTCTTGGATGCTGG TGTCGTTGTGGACATTGAGGTGGGACTTGGCCCTGCTGGCGAGATGAGGTACCCATCGTA TCCCCAGAGTCAGGGATGGGTGTTCCCAGGCGTTGGAGAATTCATATGCTATGATAAGTA CCTGCAAGCAGACTTCAAAGCAGCAGCAGAAGAGGCTGGGCATCCTGAGTGGGATTTGCC TGATGATGCTGGGACGTACAATGACACTCCTGAGAAGACCCAGTTCTTCGCGGATAACGG AACATACCAGACCGACAAGGGGAAGTTCTTCCTCACATGGTACTCAAACAAACTGATCAA GCACGGTGATAAGATCTTGGACGAAGCAAACAAGGTCTTCCTGGGATGCAAGGTGCAGCT GGCAATCAAAGTCTCTGGCATACACTGGTGGTACAACGTTCCAAACCATGCAGCTGAGCT CACTGCCGGATACTACAACTTAGATGACAGAGATGGCTACAGAACCATAGCACACATGCT CACAAGGCATCGTGCTAGCATGAACTTCACTTGTGCTGAGATGAGGGACAGTGAACAGAG TTCAGAGGCGAAAAGTGCACCTGAGGAACTGGTTCAACAGGTGCTGAGTGCTGGATGGAG AGAGGGCCTAAATTTGGCATGTGAAAATGCACTCAACCGATATGATGCAACAGCTTACAA CACCATCCTCAGGAATGCAAGACCTCAAGGCATCAACAAGAATGGCCCTCCAGAACACAA GTTGCACGGATTCACCTACCTCCGAGTATCTGATGAACTGTTCCAGGAACAGAACTACAC CACTTTCAAAACTTTTGTCAGGAGAATGCATGCTAACCTGGATTATAATCCAAATGTCGA TCCAGTTGCACCATTGGAAAGATCAAAGGCAGAGATACCAATTGAAGAAATCCTAGAAGT AGCACAGCCAAAATTGGAGCCATTTCCCTTCGACAAGGACACCGACCTACCAGTTTAAAC ACTCCAATGATGCAAACTACAGGAAGAATCACGAGACACTTAAAAAATCAAGACAAATAG TAAGCCTATTGTCGAGCAGTAGTCTATTAACTAAATAAAATGCTGTGTGGAGCATATTAT AATCGCATATTGCCCTAATAATATTGTGTTGTTAAACCTGAGGCTTGATGGTTATCTGAT GAGTTGTAATAATAGCCTTGGTCTTCCTGTTGTATGTATGTATTTGAGCTAAGGAATAAA AATTGTGGCTTTGTGGGTTATTTATTGTGCCCTTTAGAGAGTATGTGTGGTTTACAAGTG CTTGAAATAATAGTTCTACCTGCACATTCTGGTGATGATAAAAACAAATCATTACACAAC ATCAAGAGAAAAATAATAATCAAATCAAAATGGTGTGATGATAAAAGAATAAAATGTGTT GTGAAGCTAAGAGAGCACCATGGTTGTATATGATTTGGATCACCTATTTTCTGTGTCAGT TTTATGCATACTGTTATGGCTCTGGACCGGATTTATGTCCGACGCCGTCTAGGTTCAGGG TTAGCAAATCAATAACCTTATCTTTCTATCTTTAGAGTTTCTACATTTTCCTTTGGAAGG TTGAGTCATTTATGGACTATAAATAAAGGGTTCAAGGAAGAGCAAGGCATGCTTGATTGC CAACGATTCTATTAGCAGGCACTGCCAATGACAACTGGTCGGTGACGCCGTACAGCCATT ATCGTGACGATAGGTTGTCATCGATTTCCTGCGGCTGCCTCTACCAATTCTATAATTCAA AAGAATACAAACCTTTCATGTAACTAAAAAAATGTTTGCTTCACCTCAACCCAAAGCCAA AGATGTCACAAATTGGCATAAACATGTACTATGTAGTGTGGATCATCATGCAACCCGTGC TCGAACTTGAACTAAAAAAGGATCAAACCTGAGGATCGACAGATCGGCCACTTGGTTAGT GGAGGTGGGATTTAACATCCTGCCAATCTAGTGGTCCAACTCAGGCAAAAGTCCTTGAAT AAAAGCCAGATGACCTAACATTCTCTGTTTTAAAAAATACCAGGACAAATCTCCTAGAAA ATGCTACAAGATTTTTTTTTCGTGACCGTGTCATTGCACGTTTTTCATTAAGAGGGAGTA GAGTGAACAAAGTACAAACCCCCTGTCGGTAATTAGAGTTACCGAATAGGAGGGTTCCCA AAGGACCACTAAAGCGATACTACAGAACGCATTTTGCAACACAACATAAGCCGGTAATAG AAGGTAATCGTAGAAGAATAGGAAGCGACTGCAAGTGTCTGAAACCCGCTGAAGACCATT CACTTGTTTCGTCCAAGATCAAGCACAGCAGCTCCCGTGGCTGGCCCAACGAAGGTCTTC GTGTTCCTCTTTTTTCAATTTCTAAAATGCTACAAGATTTGTCTGTGGATTCGTCAACAG AAGCACAGGAATTGTCTTTAGAGTAAGGAGAAAATCAAAGTAACAGAGCAAAAGTAACAA TATGTTTTTCTTCCAGCTCAGGGAGCTCACTAGGGCCATACATGCTAATTGATTACTGAT AGAGCAACCGAATTAAGGGTACATATGCATGAATCCTTGTAGGTTTTTAACGAAACGGAA GGAAGAGTGCCAGAGAGGAACACCACTATTTCAGTTTCAGTCAGTTAATTAGCGGACTGG TGTAGCTAGAGCAGAAAATGAATCTATCAGAACATGTTATAGGGCTGATCCCACCAAGTT TAGCAAATCACAAAAGTACTACATGGAGAAAATAAAAACCCCTACATATTATGGCTCACA CATATCCGTGACAGATATCCTATTGCTTTTGATCCTGAAAATATCATATAGCAACTTGGG CGTTACAAACAATACGGAATACGGTGTGTGGTATGCTGTGAATGAAGGTTAACGCTACTG CTTCAGTTAAGCGCTAGCAGGCGCGCGGGCCTTGACTTCGATTGAATTGATTGATTGATG GAACTACTCGCAAATCATGATTCGGGGTCGACTGCGTGATCTCAACGAGGGTGTGGTACT GTGGTCTTGAGCCTGGAACAGGCACAGAGCGGCCGACTAACCTGCGTGAGTGCGTGACGG CGTGGGCTGGATAGCGACTCGCGAGCCCCCCTGCGCCTTCGCCCTTCGAGCTCCGCTCCC TCCACTGTACGCGGCGCTCGAGCCGAGCATCGGAGGCGGCGCTGTCGCCGAAACCCGCCA CTGCGAGAACGGAGAGGATTGTTCGTCAAGCAGTTGGCCAGTTGGGGCAC