Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021677_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:159829806:159831164:-1 gene:Zm00001d021677 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase nepenthesin-1
Sequence	ATGCCAATGTCATCGACAGCACAAATGGCTTCCCTCGCCGTTCTCATCATTTCCCTCGTC TTTGCGGCGCTTGCCTCCGACTCCGACGCCGCCGCAGGCGTCCGCGTCGAGCTCACGCGC GTCCACGCCGACCCCAGCGTGACCGCGTCCCAGTTCGTCCGCGGCGCCCTGCGCCGCGAC ATGCACCGGCACAACGCCAGGAAGCTAGCCCTAGCCGCGTCGTCCGGCGCCACGGTGTCC GCGCCGACCCAGGACTCGCCCACCGCCGGGGAGTACCTGATGGCGCTGGCCATCGGCACG CCGCCGCTGCCGTACCAGGCCATCGCCGACACGGGCAGCGACCTCATCTGGACGCAGTGC GCGCCCTGCACCTCCCAGTGCTTCCGCCAGCCGACGCCGCTGTACAACCCGTCCAGCTCC ACCACGTTCGCCGTGCTCCCGTGCAACAGCTCGCTGAGCGTATGCGCGGCGGCGCTGGCC GGGACCGGGACGGCCCCGCCGCCGGGGTGCGCGTGCACGTACAACGTCACGTACGGCAGC GGGTGGACGAGTGTCTTTCAGGGGTCCGAGACCTTCACGTTCGGGTCCACGCCGGCCGGT CATGCCCGCGTCCCTGGCATCGCCTTCGGCTGCAGCACCGCCAGCAGCGGCTTCAACGCC TCGTCCGCGTCCGGCCTCGTCGGGCTGGGCAGGGGGAGGCTGTCGCTCGTCTCCCAGCTC GGCGTCCCCAAGTTCTCCTACTGCCTCACGCCGTACCAGGACACCAACAGCACGAGCACG CTCCTCCTCGGGCCGTCGGCGTCGCTCAACGGCACCGCCGGCGTCAGCTCCACGCCTTTC GTCGCCAGCCCTTCCACTGCGCCCATGAACACCTTCTACTATCTCAACCTGACCGGCATA TCCCTCGGCACGACGGCACTGTCCATCCCGCCCGACGCCTTCTCGCTCAACGCGGACGGC ACCGGCGGGCTCATCATCGACTCTGGCACCACCATCACATTACTGGGCAATACGGCGTAC CAGCAGGTTCGGGCAGCGGTTGTCTCCCTGGTGACGCTGCCCACCACAGACGGGTCGGCA GACACGGGGCTCGACCTGTGCTTCATGCTGCCCTCCTCAACATCGGCGCCGCCGGCCATG CCGAGCATGACGCTCCACTTCAACGGCGCGGACATGGTGCTCCCGGCGGACAGCTACATG ATGTCGGACGACTCCGGCTTGTGGTGCCTGGCCATGCAGAACCAGACCGACGGCGAGGTA AACATTCTCGGCAACTACCAGCAGCAAAACATGCACATCCTCTACGACATTGGGCAGGAG ACATTGTCGTTTGCTCCGGCCAAATGCAGCGCGCTCTGA

Peptide Sequence

PEP ID	Zm00001d021677_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:159829806:159831164:-1 gene:Zm00001d021677 transcript:Zm00001d021677_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase nepenthesin-1
Sequence	MPMSSTAQMASLAVLIISLVFAALASDSDAAAGVRVELTRVHADPSVTASQFVRGALRRD MHRHNARKLALAASSGATVSAPTQDSPTAGEYLMALAIGTPPLPYQAIADTGSDLIWTQC APCTSQCFRQPTPLYNPSSSTTFAVLPCNSSLSVCAAALAGTGTAPPPGCACTYNVTYGS GWTSVFQGSETFTFGSTPAGHARVPGIAFGCSTASSGFNASSASGLVGLGRGRLSLVSQL GVPKFSYCLTPYQDTNSTSTLLLGPSASLNGTAGVSSTPFVASPSTAPMNTFYYLNLTGI SLGTTALSIPPDAFSLNADGTGGLIIDSGTTITLLGNTAYQQVRAAVVSLVTLPTTDGSA DTGLDLCFMLPSSTSAPPAMPSMTLHFNGADMVLPADSYMMSDDSGLWCLAMQNQTDGEV NILGNYQQQNMHILYDIGQETLSFAPAKCSAL

Transcript Sequence

Transcript ID	Zm00001d021677_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:159829806:159831164:-1 gene:Zm00001d021677 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase nepenthesin-1
Sequence	ATGCCAATGTCATCGACAGCACAAATGGCTTCCCTCGCCGTTCTCATCATTTCCCTCGTC TTTGCGGCGCTTGCCTCCGACTCCGACGCCGCCGCAGGCGTCCGCGTCGAGCTCACGCGC GTCCACGCCGACCCCAGCGTGACCGCGTCCCAGTTCGTCCGCGGCGCCCTGCGCCGCGAC ATGCACCGGCACAACGCCAGGAAGCTAGCCCTAGCCGCGTCGTCCGGCGCCACGGTGTCC GCGCCGACCCAGGACTCGCCCACCGCCGGGGAGTACCTGATGGCGCTGGCCATCGGCACG CCGCCGCTGCCGTACCAGGCCATCGCCGACACGGGCAGCGACCTCATCTGGACGCAGTGC GCGCCCTGCACCTCCCAGTGCTTCCGCCAGCCGACGCCGCTGTACAACCCGTCCAGCTCC ACCACGTTCGCCGTGCTCCCGTGCAACAGCTCGCTGAGCGTATGCGCGGCGGCGCTGGCC GGGACCGGGACGGCCCCGCCGCCGGGGTGCGCGTGCACGTACAACGTCACGTACGGCAGC GGGTGGACGAGTGTCTTTCAGGGGTCCGAGACCTTCACGTTCGGGTCCACGCCGGCCGGT CATGCCCGCGTCCCTGGCATCGCCTTCGGCTGCAGCACCGCCAGCAGCGGCTTCAACGCC TCGTCCGCGTCCGGCCTCGTCGGGCTGGGCAGGGGGAGGCTGTCGCTCGTCTCCCAGCTC GGCGTCCCCAAGTTCTCCTACTGCCTCACGCCGTACCAGGACACCAACAGCACGAGCACG CTCCTCCTCGGGCCGTCGGCGTCGCTCAACGGCACCGCCGGCGTCAGCTCCACGCCTTTC GTCGCCAGCCCTTCCACTGCGCCCATGAACACCTTCTACTATCTCAACCTGACCGGCATA TCCCTCGGCACGACGGCACTGTCCATCCCGCCCGACGCCTTCTCGCTCAACGCGGACGGC ACCGGCGGGCTCATCATCGACTCTGGCACCACCATCACATTACTGGGCAATACGGCGTAC CAGCAGGTTCGGGCAGCGGTTGTCTCCCTGGTGACGCTGCCCACCACAGACGGGTCGGCA GACACGGGGCTCGACCTGTGCTTCATGCTGCCCTCCTCAACATCGGCGCCGCCGGCCATG CCGAGCATGACGCTCCACTTCAACGGCGCGGACATGGTGCTCCCGGCGGACAGCTACATG ATGTCGGACGACTCCGGCTTGTGGTGCCTGGCCATGCAGAACCAGACCGACGGCGAGGTA AACATTCTCGGCAACTACCAGCAGCAAAACATGCACATCCTCTACGACATTGGGCAGGAG ACATTGTCGTTTGCTCCGGCCAAATGCAGCGCGCTCTGA