Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021669_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:7:159577955:159605524:-1 gene:Zm00001d021669 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosyl-DNA phosphodiesterase 1
Sequence	ATGGCGTCCGCATCTCGAGTGAGGCTTGGCACTCTAGTTCCCCTTACCAAGGACAATGCT GGCTCATCAAATGGATCTGTATCAAGCATTCCTATATTCCAGGGGCCCAATGTAGTCGGG AGGGATCATTTGGTTGTCGTCGACAAGAGGATCAGCCGCAAGCATCTGAGCCTCCACGCC TCTACTGATGGCTCCATTGAAGTAGTAGTGGAAGGTCCAAACCCTATAATTGTGCGATCG AAGGGACAGAGGAGGAAGGTTTGTGCTAAAGAGACAGCCAAGATTGCTCATGGTGATGTC CTAGAACTGATTCCTGGTGATTATTTCGTGAAGTACGTGGACATGGGTGATGAACATGTA CCAATGCATTTGAGCGACTTAATGAAGGGTAAGAGGTATAGTGAGGAACATGGCGCAGCA GTCAAGAGGATTCGACAGATTATGGAAGATGAGGCTTTGGCAAAAACACTACAGGAAAGC TTTGCAGCAGATGATGCAGCTGTTTCTGGCATGCCTTCTGGCCAAAAAATAAGTTCACAT GACAGTGCCGGTTCTTCCGAAAGAAATAATGACAGAACACACTCTGTTGGTCCTTTGAAA GATATGCTCCCTTTGACTTTTCGGCTCATGCATGTCCAAGGTCTTCCATCATGGACTAAC ACTTCATCAGTTACCATTCAAGATGTCATACAGGGTGAAGTACTGCTTGCTGTACTTTCA AATTACATGGTGGACATTGATTGGTTGCTTACTGCGTGCCCAAGTTTGAGGAAGGTTCCA CATGTCCTGGTTCTACATGGGCAAGATGGTGCTTCATTAGAGCTTATGAAGAAGCTGAAG CCTGCAAATTGGATCCTTCACAGGCCTCCACTCCCAATTTCATTTGGAACACACCATTCT AAGGCTATGTTGCTTGTGTATCCTCAAGGAATTCGAATTGTTGTGCACACAGCAAATTTG ATACATGTTGACTGGAATTACAAAAGTCAGGGACTATGGATGCAAGATTTTCCCTGGAAA GACACAGTCGATATGAATAAAAAAACAGCCTTTGAGAATGATCTAGTTGATTATCTAAGT GCACTTAAGTGGCCTGAGTTCAGGGTGAATCTCCCAGGGGTTGGTGATGTCAACATCAAT GCGGCATTCTTTAGGAAGTTTGACTATAGTAATTCAATGGTCAGGTTGATTGGATCGGTT CCTGGTTATCATGTGGGCTCCAATATTAGGAAGTGGGGCCATATGAAACTTAGGAATGTT CTGGATGAAATCATGTTCAATAAACAATTTTGCAAATCCCCTCTGATTTACCAGGTACCT TTTTATATATATCCATTTTTAGGGCATGCAACTTTGCAAAAAATGTGGTGGTAA

Peptide Sequence

PEP ID	Zm00001d021669_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:7:159577955:159605524:-1 gene:Zm00001d021669 transcript:Zm00001d021669_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosyl-DNA phosphodiesterase 1
Sequence	MASASRVRLGTLVPLTKDNAGSSNGSVSSIPIFQGPNVVGRDHLVVVDKRISRKHLSLHA STDGSIEVVVEGPNPIIVRSKGQRRKVCAKETAKIAHGDVLELIPGDYFVKYVDMGDEHV PMHLSDLMKGKRYSEEHGAAVKRIRQIMEDEALAKTLQESFAADDAAVSGMPSGQKISSH DSAGSSERNNDRTHSVGPLKDMLPLTFRLMHVQGLPSWTNTSSVTIQDVIQGEVLLAVLS NYMVDIDWLLTACPSLRKVPHVLVLHGQDGASLELMKKLKPANWILHRPPLPISFGTHHS KAMLLVYPQGIRIVVHTANLIHVDWNYKSQGLWMQDFPWKDTVDMNKKTAFENDLVDYLS ALKWPEFRVNLPGVGDVNINAAFFRKFDYSNSMVRLIGSVPGYHVGSNIRKWGHMKLRNV LDEIMFNKQFCKSPLIYQVPFYIYPFLGHATLQKMWW

Transcript Sequence

Transcript ID	Zm00001d021669_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:159577955:159605524:-1 gene:Zm00001d021669 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosyl-DNA phosphodiesterase 1
Sequence	ACCGCCTGGGCACCTCCCCCGGCCTCCGACGCTGCTAACCGCTCGACGTCCCGCCACCTC CACAACGCAGTTGGGCGCGCTTCCAGCCTCCGCCGGACCGGCGAGCTCCGGAGGTCTCAG AGTGTCCATGGAATGATTTAAAGATGGCGGCACCACTGCCTTCGTCTTGCACATCTCTTG CACACTCTCCTAGGGTTTAGGGTCTAGACTCAAACCCCTTCTCGAAGACTACCATATGGC GTCCGCATCTCGAGTGAGGCTTGGCACTCTAGTTCCCCTTACCAAGGACAATGCTGGCTC ATCAAATGGATCTGTATCAAGCATTCCTATATTCCAGGGGCCCAATGTAGTCGGGAGGGA TCATTTGGTTGTCGTCGACAAGAGGATCAGCCGCAAGCATCTGAGCCTCCACGCCTCTAC TGATGGCTCCATTGAAGTAGTAGTGGAAGGTCCAAACCCTATAATTGTGCGATCGAAGGG ACAGAGGAGGAAGGTTTGTGCTAAAGAGACAGCCAAGATTGCTCATGGTGATGTCCTAGA ACTGATTCCTGGTGATTATTTCGTGAAGTACGTGGACATGGGTGATGAACATGTACCAAT GCATTTGAGCGACTTAATGAAGGGTAAGAGGTATAGTGAGGAACATGGCGCAGCAGTCAA GAGGATTCGACAGATTATGGAAGATGAGGCTTTGGCAAAAACACTACAGGAAAGCTTTGC AGCAGATGATGCAGCTGTTTCTGGCATGCCTTCTGGCCAAAAAATAAGTTCACATGACAG TGCCGGTTCTTCCGAAAGAAATAATGACAGAACACACTCTGTTGGTCCTTTGAAAGATAT GCTCCCTTTGACTTTTCGGCTCATGCATGTCCAAGGTCTTCCATCATGGACTAACACTTC ATCAGTTACCATTCAAGATGTCATACAGGGTGAAGTACTGCTTGCTGTACTTTCAAATTA CATGGTGGACATTGATTGGTTGCTTACTGCGTGCCCAAGTTTGAGGAAGGTTCCACATGT CCTGGTTCTACATGGGCAAGATGGTGCTTCATTAGAGCTTATGAAGAAGCTGAAGCCTGC AAATTGGATCCTTCACAGGCCTCCACTCCCAATTTCATTTGGAACACACCATTCTAAGGC TATGTTGCTTGTGTATCCTCAAGGAATTCGAATTGTTGTGCACACAGCAAATTTGATACA TGTTGACTGGAATTACAAAAGTCAGGGACTATGGATGCAAGATTTTCCCTGGAAAGACAC AGTCGATATGAATAAAAAAACAGCCTTTGAGAATGATCTAGTTGATTATCTAAGTGCACT TAAGTGGCCTGAGTTCAGGGTGAATCTCCCAGGGGTTGGTGATGTCAACATCAATGCGGC ATTCTTTAGGAAGTTTGACTATAGTAATTCAATGGTCAGGTTGATTGGATCGGTTCCTGG TTATCATGTGGGCTCCAATATTAGGAAGTGGGGCCATATGAAACTTAGGAATGTTCTGGA TGAAATCATGTTCAATAAACAATTTTGCAAATCCCCTCTGATTTACCAGGTACCTTTTTA TATATATCCATTTTTAGGGCATGCAACTTTGCAAAAAATGTGGTGGTAAAATTAATCTTT TGATCTTTAATACGTTGATAGTTGAAATTAATAAATAACATTTATTGACACAAAACTTGT GCCTTGACAGTATTTCTACCACAGTTATATCTTGAAGGCGCTCTTGTACTTTGCAGCATA CTAATGTCATTCATAGAGCTGTGCCAGTGTTGCAAATTTGCAATGGTAAACAAAGAAGCA TATAACAAATAGACCATTTTCCCTTGCGTTAGAGTGTATTCAATGGAGGGCTGGTACGAT TGTACAAAACTATCTGTTATTGCCTTAACAATTGAGCTTTAAATCCAAAAGCCATATTTC CTTTCTGTTTACTCAAAAGTTTAAAGTGTATTATCATCTATCACCTATCAACTTGAAGTT GTAGGATGTTTACCATTTGTTCATTGTTGGATGTAGTTTTCTTCCCTGGGGTCACTTGAT GAGAAATGGATGAGTGAATTTGCATGCTCGCTGTCAGCTGGTAAATCAGATGATGGATCA CAGCTAGGAATCGGGAAACCACTGATTGTCTGGCCTACGGTGGAGGATGTTCGGTGCTCG ATAGAGGTAGAAGAAGCTTAAGCTCAAATGCATTCTTCTTTATTTGTGCACGTACGAAAC TATAATGAACAGAAGGCCCCATGCTGTCTGTGCGTTCTTGACCCTTGACATGTATACAAC TTTTTTAAAACTAGTAGGTTGTATTTTAAGATGGATATGTACTGGCATCATGATTCATGA ACATTTTACGTTCAGACATTAATTTTTCACTCCAATCAATGCTTGCTAGATACACGGTAT TAATTTTTACTAATCATATTTACCTGTATATCATCTACTCCCTCCGTCCCAAAATATAAT TCGTTTTAGACTAATCACATATTCTTTAAGTAACATATGAATGTAGTTTCCATGTATGTC TAGATTCATTATCATTTGAATGAAAGTGAACGGAAAAAAATAGGCAGAACGGAAGGAGTA TCTTATTTTCCAACTATTATCTCTGTTTCATATTCATATTAGGGTTATGCAGCTGGTAGT TGCATTCCAAGTCCTCAAAAGAATGTTGAGAGAGACTTCTTGAAGAAATATTGGTCCAGG TGGAAAGCGGATCATGTAGGTCGTTGGTATGCTCTCTTTTCCTCTAATTACCTGAAAACC TATGATTTTATTTGAATAAAATTACATGATCGTTAGACCACCAGTGGGCTGCTATATTGC AATCGTCGGTCCATTATACATACACCATGCAACCGTGTGTTTTTTACCACTTACAGAATA GCATAACGTATAGCCATGATTGAAAGACTGACAAAGTGTTCAGGACCTTTAATTAAGTGC CTAAGGCATCAAACATTCTGCAGAAGTATAGCTTCTCCAGAGAAATATTTCTTTACCGAG TGGCCAATGGGGTAGTATCAGTAAAAGAGCCTAGGAATGATAAAGGTCTCTTCTGGCCTT GCCATTCTGACATTTTGTGAAGGTAGCAGATCAAGTCTCGATGTTTCTGAGCTTCTGTAG TGCGGTAGTTTTTTTTAAAAAAAAAATCCTCTACCAGAAACAATAGCTTATAGTCTTTTT TTTTCATTCTAGTTAACAGGGCAGTGAATAATCTCTGGGTAAGCCAAGCACTCAAACAGC ATCAGTGCATTCAAGTGGGCATATGCTTTATGGCCTGAAAAAGACTGCCCTTCTTTTCTT TTCTTAATCTTTCAATGGTGCATACTGTTGTCGTGGACTAACATGCTGAACTTGATTTTT TTCCTTTATCAGTCGGGCTATGCCTCACATAAAAACCTTTACTCGTTACAGTGGCCAAAA CATTGCATGGTTTCTGCTTACCTCAGCAAATTTAAGCAAAGCTGCTTGGGGCGCGCTACA GAAGAACAACACACAGCTAATGATACGTTCATATGAGCTAGGTGTATTGTTCTTGCCCCA AACACTCCAATCAGTACCACAATTTTCATGCACGGAAAAGAGCCGCTCAATCAGGGATGG CGTCGCCCTTGGCAAGACGATCAAGACCAAGCTGGTCACTCTTTGCTGGAAAGGTGACGA AGAGGATCCATCTATTGTGAGATTGCCTGTGCCATACCAGCTTCCTCCACAACCTTATGG CACACAAGATGTCCCTTGGTCGTGGGATCGGAGGTACACAAAGAAGGATGTGTATGGTTC CGTCTGGCCACGATATGGCTAGCCTGTGATTTGGTTTTATTTATATCCCAGAAAAAGATG ATTCCTAACCCTGTTACTGTTCGGGTCGGTTTGAACCATCGGGCAGCCCCTCTCGTTCTG TGACCCTGCTTTCATGGCCACTCGACCATCAGTGGCGAGAATTGTGGGATACGATATTTT CATCTGGTTGAAGCTATGATATTGATTGATGCG