Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021661_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:159417839:159420270:-1 gene:Zm00001d021661 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brittle stalk-2-like protein 5
Sequence	ATGGTCATGGCAGCGCCAGTGCCGCTCCGGCGGCGGCGGGCGCTCCTGGTGGTAGCGACG TTACTCGCCGTGGTCACCGCGGCGATGGCGCAGGAGGCGTGCAACGGCGTGTTCCTGACG TACACGTTCATGGAGCGCGCCAAGGAGTACCCGCACCTGAAGAAGGCGGCGGCGCAGCCG TACGCGTTCAAGGCCACGGCGACGGTGCTCAACACCATGACCGAGGACCTCAAGGCGTGG CAGATGTTCGTGGGCTTCCAGCACAAGGAGATCCTCGTGTCCGTCGGCGGCGCCGTGCTG CTCGACGGCTCCGACCTCCCCGCCAACGTGTCCGGTGGCGCCACCTTTGCGGGATACCCA ATGGCCGACCTCCTCAACTCCATCGAGACGGCGGGCGAGCCGTCCCTGATCGAGAGCAAG ATTGAGATCACCGGCACCCAATTCGGCGTGAAGGCCCCCGGGAAGCCCATGCCCAAGACC ATCAAGTTGACCAACCCCGTGGGCTTCCGGTGCCCCGCCCCCAACCACAAAGACAGCGTG ATGTACGTGTGCTGCGTCAAGGACCGCAAGTTCAAGGCGAAGAAGGCTAACAGCACGCGG TACCAGACACGGCGGAAAGCGGACCTGACGTTCGCCTACGACGTGCTGCAGGCCAACACC AACAACTACCAGGTGCAGGTGACCATCGACAACTGGAGCCCCATCAGCCGGCTGGACAAC TGGAACCTCACCTGGGAGTGGAAGCGCGGCGAGTTCATCTACAGCATGAAGGGCGCCTAC ACGCTGCTCAAGGAAGGCCCCGCCTGCATCTACAGCCCCGCAGCGGGCTACTACAAGGAC ATGGACTTCACCCCCGTCTACAACTGCGAGAAGCGGCCCGTCATCGTGGACCTCCCGCCG GAGCGGGAGAAGGACGACGCCGTCGGGAACCTCCCCTTCTGCTGCAAGAACGGCACGCTG CTGCCGCCCACCATGGACCCGTCCAAGTCGCGGGCCATGTTCCAGATGCAGGTGTACAAG CTGCCGCCGGACCTGAACCGCACGGCGCTGTACCCGCCGCAGAACTGGAAGATCTCCGGC AAGCTCAACCCGCAGTACGCGTGCGGGCCGCCCGTCCGCGTGAGCCCCCAGGAGTTCCCG GACCCGACGGGTCTCATGTCGACCACCCCCGCCGTGGCGTCGTGGCAGGTGGCGTGCAAC ATCACGCGGCCCAAGAAGCGCGCCTCCAAGTGCTGCGTCTCCTTCTCCGCCTACTACAAC GACTCCGTGCGACCCGGACAAGCGCGCCATGCTGCTGCCACCGGAGGCGCTGCTCGTCCC GTTCGACAACCGGTCGGCCAAGGCACGGGCGTGGGCCAAGATCAAGCACTGGCGGGTGCC CAACCCCATGCCGTGCAGCGACAACTGCGGCGTCAGCATCAACTGGCACGTCATCAACAA CTACAAGTCCGGCTGGTCGGCGCGCATGACCATCTTCAACTGGCAGGACTACACCTTCAA GGATTGGTTTGCCGCAGTGACCATGGGCAGCCACTTCAGCGGCTACGAGAACGTCTACTC CTTCAACGGCACGCGGATGGGCGCCCCCTTCAACAACACCATCTTCATGCAGGGGGTGCC GGGCCTCGCTTACCTCGAGCCCATCACCGACGCGAAGACGACATCGGAACCCAGGCTTCC CGGCAAGCAGCAGTCGGTCATCTCGTTCACCAGGAAAGACGCGCCCAATGTCAACATTCC CAGAGGGGAAGGCTTCCCCAAGAGGATCTACTTCGACGGCGAGGAGTGCGCGCTCCCGGA TAG

Peptide Sequence

PEP ID	Zm00001d021661_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:159417839:159420270:-1 gene:Zm00001d021661 transcript:Zm00001d021661_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brittle stalk-2-like protein 5
Sequence	MVMAAPVPLRRRRALLVVATLLAVVTAAMAQEACNGVFLTYTFMERAKEYPHLKKAAAQP YAFKATATVLNTMTEDLKAWQMFVGFQHKEILVSVGGAVLLDGSDLPANVSGGATFAGYP MADLLNSIETAGEPSLIESKIEITGTQFGVKAPGKPMPKTIKLTNPVGFRCPAPNHKDSV MYVCCVKDRKFKAKKANSTRYQTRRKADLTFAYDVLQANTNNYQVQVTIDNWSPISRLDN WNLTWEWKRGEFIYSMKGAYTLLKEGPACIYSPAAGYYKDMDFTPVYNCEKRPVIVDLPP EREKDDAVGNLPFCCKNGTLLPPTMDPSKSRAMFQMQVYKLPPDLNRTALYPPQNWKISG KLNPQYACGPPVRVSPQEFPDPTGLMSTTPAVASWQVACNITRPKKRASKCCVSFSAYYN DSVRPGQARHAAATGGAARPVRQPVGQGTGVGQDQALAGAQPHAVQRQLRRQHQLARHQQ LQVRLVGAHDHLQLAGLHLQGLVCRSDHGQPLQRLRERLLLQRHADGRPLQQHHLHAGGA GPRLPRAHHRREDDIGTQASRQAAVGHLVHQERRAQCQHSQRGRLPQEDLLRRRGVRAPG

Transcript Sequence

Transcript ID	Zm00001d021661_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:159417839:159420270:-1 gene:Zm00001d021661 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brittle stalk-2-like protein 5
Sequence	ATGTGTTTGCTTCCCATCGCTCCTGGCTTCCCCGTCGAGCGAGGGAGCCACATTCTTGCT TCCATTGTTCGCTCAAACGCTTGGTAGCTCGATCGGCGCCGTTGTTCTTGGGCCGGCCGG TCGAGCCGAATGGTCATGGCAGCGCCAGTGCCGCTCCGGCGGCGGCGGGCGCTCCTGGTG GTAGCGACGTTACTCGCCGTGGTCACCGCGGCGATGGCGCAGGAGGCGTGCAACGGCGTG TTCCTGACGTACACGTTCATGGAGCGCGCCAAGGAGTACCCGCACCTGAAGAAGGCGGCG GCGCAGCCGTACGCGTTCAAGGCCACGGCGACGGTGCTCAACACCATGACCGAGGACCTC AAGGCGTGGCAGATGTTCGTGGGCTTCCAGCACAAGGAGATCCTCGTGTCCGTCGGCGGC GCCGTGCTGCTCGACGGCTCCGACCTCCCCGCCAACGTGTCCGGTGGCGCCACCTTTGCG GGATACCCAATGGCCGACCTCCTCAACTCCATCGAGACGGCGGGCGAGCCGTCCCTGATC GAGAGCAAGATTGAGATCACCGGCACCCAATTCGGCGTGAAGGCCCCCGGGAAGCCCATG CCCAAGACCATCAAGTTGACCAACCCCGTGGGCTTCCGGTGCCCCGCCCCCAACCACAAA GACAGCGTGATGTACGTGTGCTGCGTCAAGGACCGCAAGTTCAAGGCGAAGAAGGCTAAC AGCACGCGGTACCAGACACGGCGGAAAGCGGACCTGACGTTCGCCTACGACGTGCTGCAG GCCAACACCAACAACTACCAGGTGCAGGTGACCATCGACAACTGGAGCCCCATCAGCCGG CTGGACAACTGGAACCTCACCTGGGAGTGGAAGCGCGGCGAGTTCATCTACAGCATGAAG GGCGCCTACACGCTGCTCAAGGAAGGCCCCGCCTGCATCTACAGCCCCGCAGCGGGCTAC TACAAGGACATGGACTTCACCCCCGTCTACAACTGCGAGAAGCGGCCCGTCATCGTGGAC CTCCCGCCGGAGCGGGAGAAGGACGACGCCGTCGGGAACCTCCCCTTCTGCTGCAAGAAC GGCACGCTGCTGCCGCCCACCATGGACCCGTCCAAGTCGCGGGCCATGTTCCAGATGCAG GTGTACAAGCTGCCGCCGGACCTGAACCGCACGGCGCTGTACCCGCCGCAGAACTGGAAG ATCTCCGGCAAGCTCAACCCGCAGTACGCGTGCGGGCCGCCCGTCCGCGTGAGCCCCCAG GAGTTCCCGGACCCGACGGGTCTCATGTCGACCACCCCCGCCGTGGCGTCGTGGCAGGTG GCGTGCAACATCACGCGGCCCAAGAAGCGCGCCTCCAAGTGCTGCGTCTCCTTCTCCGCC TACTACAACGACTCCGTGCGACCCGGACAAGCGCGCCATGCTGCTGCCACCGGAGGCGCT GCTCGTCCCGTTCGACAACCGGTCGGCCAAGGCACGGGCGTGGGCCAAGATCAAGCACTG GCGGGTGCCCAACCCCATGCCGTGCAGCGACAACTGCGGCGTCAGCATCAACTGGCACGT CATCAACAACTACAAGTCCGGCTGGTCGGCGCGCATGACCATCTTCAACTGGCAGGACTA CACCTTCAAGGATTGGTTTGCCGCAGTGACCATGGGCAGCCACTTCAGCGGCTACGAGAA CGTCTACTCCTTCAACGGCACGCGGATGGGCGCCCCCTTCAACAACACCATCTTCATGCA GGGGGTGCCGGGCCTCGCTTACCTCGAGCCCATCACCGACGCGAAGACGACATCGGAACC CAGGCTTCCCGGCAAGCAGCAGTCGGTCATCTCGTTCACCAGGAAAGACGCGCCCAATGT CAACATTCCCAGAGGGGAAGGCTTCCCCAAGAGGATCTACTTCGACGGCGAGGAGTGCGC GCTCCCGGATAGGATACCCAAGGTGTCGAGCGCGCGCCGGCGGGCTGGGACCGCGAGCCT GGGTCAGATAGCCATGGCGGCGGCGCTCGTGATGATTGTGGCGCTAGTGGATTCCTTGTG CCTATGATGACTGAAAACTTCTTTGGTTCATAGAGGATTTGACTGACCTAGCGCGCTGCA TTTGTTGAACACTTCATTCATTAACTAGGTACGTGCCCGTGCGTTGCTACGGAAGTAAAA AAATAGCGTACAAAATATATACGAAGCGAAAAACATCACT