Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021645_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:158959004:158960016:1 gene:Zm00001d021645 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LHCP TRANSLOCATION DEFECT
Sequence

ATGGCGTCCATCCCGTGCACCTTCCAGCTGAGCACGGCGGCGTCGAGGAGGGTGTCGCCG
CGGGTGGCGGCGCAGGGGAGAGGCCAAGGAGGAGGGGGAGCGGTGCTGAGGACGCCGCTG
CTGGGCGCGGGGAGGCGGGGCCTGGGGTGGCTGCGGCCGTCGCGGTTGAGCCGCGTGGTG
CCGGCGAGCGAGAGCGGGCGGGCGGGTCCCACCTGCTGGTTCAAGTTCGGCAACAAGGAC
GCCGAGGGTGCCGGCATCTACGGCAGCCAGGCCAGGGACGACTTCGACCGCGACGACGTC
GAGCAGTACTTCAACTACATGGGGATGCTGGCGGTGGAGGGCACCTACGACAAGATGGAG
GCGCTGCTGAACCAGGACATCCACCCCGTGGACATCCTCCTCATGCTGGCAGCCTCCGAG
GGCGACCGCCCCAAGATCGAGGAGCTGCTCCGCGCCGGCGCCAGGTTCGACGTCAAGGAC
GTCGACGGCCGGACGGCGCTCGACCGGGCCACCGACGAGACCAGAGAGTTCATCCTCGGC
TTCGCCGCCAAGAAGGCCTGA

Peptide Sequence

PEP ID

Zm00001d021645_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:158959004:158960016:1 gene:Zm00001d021645 transcript:Zm00001d021645_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LHCP TRANSLOCATION DEFECT
Sequence

MASIPCTFQLSTAASRRVSPRVAAQGRGQGGGGAVLRTPLLGAGRRGLGWLRPSRLSRVV
PASESGRAGPTCWFKFGNKDAEGAGIYGSQARDDFDRDDVEQYFNYMGMLAVEGTYDKME
ALLNQDIHPVDILLMLAASEGDRPKIEELLRAGARFDVKDVDGRTALDRATDETREFILG
FAAKKA

Transcript Sequence

Transcript ID

Zm00001d021645_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:158959004:158960016:1 gene:Zm00001d021645 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LHCP TRANSLOCATION DEFECT
Sequence

AGCCTCTCGCTCTCCCGCCGACGCGCACGTCCTCCGCGCCGAGCCCAGAGGCAGACAGAG
GACGCGGCCATGGCGTCCATCCCGTGCACCTTCCAGCTGAGCACGGCGGCGTCGAGGAGG
GTGTCGCCGCGGGTGGCGGCGCAGGGGAGAGGCCAAGGAGGAGGGGGAGCGGTGCTGAGG
ACGCCGCTGCTGGGCGCGGGGAGGCGGGGCCTGGGGTGGCTGCGGCCGTCGCGGTTGAGC
CGCGTGGTGCCGGCGAGCGAGAGCGGGCGGGCGGGTCCCACCTGCTGGTTCAAGTTCGGC
AACAAGGACGCCGAGGGTGCCGGCATCTACGGCAGCCAGGCCAGGGACGACTTCGACCGC
GACGACGTCGAGCAGTACTTCAACTACATGGGGATGCTGGCGGTGGAGGGCACCTACGAC
AAGATGGAGGCGCTGCTGAACCAGGACATCCACCCCGTGGACATCCTCCTCATGCTGGCA
GCCTCCGAGGGCGACCGCCCCAAGATCGAGGAGCTGCTCCGCGCCGGCGCCAGGTTCGAC
GTCAAGGACGTCGACGGCCGGACGGCGCTCGACCGGGCCACCGACGAGACCAGAGAGTTC
ATCCTCGGCTTCGCCGCCAAGAAGGCCTGAACGACCATGTGCAGGTCAATCGTGCCCGGT
TCTTCTGGACATTTGGCTGCATGTAACTAAATTCTTCGTTTTCTGGAATCGGTGGAGTGT
TCAACCGGGGGTGAACAAGCTGTTTGCAGAGGTAGCTTTCCGTAGTCAGCTGTATTCTTA
CTGAAGACTGAGGGGTGTACTGCGACCTGCCAAATTGCTCAATAAGGTCATGCTTCGTTA
AGAGCTGCCAATTACTGAAAATCAGAGCCGCCGCTCAATCGCCAGCTTAGC