Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021639_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:158780973:158782922:-1 gene:Zm00001d021639 gene_biotype:protein_coding transcript_biotype:protein_coding description:Taxane 13-alpha-hydroxylase

Sequence

ATGGATTCTTCTCTTGTCCTAGCGCTTATCGCCGTCGCCTTGCCCGTGCTCCTCCATCTC
CTAAAGAGGGGAAAGACGCCATGGCGGCCGGCCGCGGCCAAGCTGCCGCCGGGCTCCCTT
GGCCTGCCGGTGATCGGCCAGAGCATCGGTCTTCTCCGCGCCATGCGCGCCAACACTGCC
GAGCGGTGGATCCTGGACCGGATACACCGGTACGGTCCGGTGTCCAAGCTGTCGCTGTTC
GGCAGGCCGACGGTGCTCGTCGCGGGGTCGGCGGCCAACAGGTTCATCTTCTTCAGCAGC
GCCTTAGCGATGCAGCAGCCTCGGTCAGTGCAGCGGATCCTGGGGGACAAGAGCATCCTG
GAGCTCACGGGCGCCGACCACAAGCGGATCCGCGGCGCGCTGGTCGAGTTCCTCAAGCCG
GACATGCTGAGGCTGTACGTGGGCAAGATCGACGGCGAGGTTCGGCGCCACCTCGACGAG
TGCTGGGCCGGCCGCTGCACCGTCACGGTGATGCCGCACATGAAGAGGCTCACGTTCGAC
ATCATCTCCCTGCTGCTCTTCGGCCTCGAGCGGAGCCCGCTCCAGGACGCCCTCGCGGGC
GACTTCGCCCGCGTCATGGATGGCATATGGGCCGTCCCGGTGAACCTGCCGTTCACGGCG
TTCAGCCGGAGCCTCAGGGCCAGCGCCAGGGCTCGCCGGCTGATCGCGGGGATCGCGCGG
GAGACCAGGGCCAAGCTGGAAAGGGGCGAGGCCTCCCGTAGCAGCGACCTCATCGCGTGC
CTGCTCAGTCTGACCGACCACAGCGGCGCGCGGCTGCTGAGCGAGGAGGAGATCGTGGAC
AACTCCATGGTGGCCCTCGTCGCCGGTCACGACACGTCGTCAATTCTCATGACGTTCATG
GTCCGCCACCTCGCCAACGACCCGGACACCCTCGCCGCCATGGTCCAAGAGCACGACGAG
ATCGCAAAGAACAAGGGCGACGGCCAGACCCTGGACTGGGAGGACCTGGCGAAGATGAAG
TACACGTGGCGCGTCGCGCTGGAGACCCTTCGCTTGGTGCCTCCCATCTTCGGCAACTTC
CGGCGAGCGATGCAGGACATCGAGTTCGACGGCTACCTCATCCCAAAAGGATGGCAGGTG
TTCTGGGCGGCGAGCGTGACGCACATGGACACGGGCATCTTCCACGAGCCGGCAAAGTTC
GACCCGTCCCGGTTCGAGAACCAGTCGGCGGCATCGGCGCCGCCGTGCTCGTTCGTCGCG
TTCGGCGGGGGTCCGAGGATCTGCGTCGGCATGGAGTTCGCCAGGATCGAGACGCTGGTG
ACGATGCATTACCTTGTCAGGCGGTTTAGGTGGAAGCTCTGCTGCAAGAACGATACCTTC
GCCAGGGACCCCATGCCATCGCCGCTGCACGGACTGCCCATAGAACTTGAGCAGAAGGCA
TCGCCATGA

Peptide Sequence

PEP ID

Zm00001d021639_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:158780973:158782922:-1 gene:Zm00001d021639 transcript:Zm00001d021639_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Taxane 13-alpha-hydroxylase

Sequence

MDSSLVLALIAVALPVLLHLLKRGKTPWRPAAAKLPPGSLGLPVIGQSIGLLRAMRANTA
ERWILDRIHRYGPVSKLSLFGRPTVLVAGSAANRFIFFSSALAMQQPRSVQRILGDKSIL
ELTGADHKRIRGALVEFLKPDMLRLYVGKIDGEVRRHLDECWAGRCTVTVMPHMKRLTFD
IISLLLFGLERSPLQDALAGDFARVMDGIWAVPVNLPFTAFSRSLRASARARRLIAGIAR
ETRAKLERGEASRSSDLIACLLSLTDHSGARLLSEEEIVDNSMVALVAGHDTSSILMTFM
VRHLANDPDTLAAMVQEHDEIAKNKGDGQTLDWEDLAKMKYTWRVALETLRLVPPIFGNF
RRAMQDIEFDGYLIPKGWQVFWAASVTHMDTGIFHEPAKFDPSRFENQSAASAPPCSFVA
FGGGPRICVGMEFARIETLVTMHYLVRRFRWKLCCKNDTFARDPMPSPLHGLPIELEQKA
SP

Transcript Sequence

Transcript ID

Zm00001d021639_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:158780973:158782922:-1 gene:Zm00001d021639 gene_biotype:protein_coding transcript_biotype:protein_coding description:Taxane 13-alpha-hydroxylase

Sequence

AACAGCCTGCTGCTGTGCAGTGTGCACCACCAACATCTGACATCTCCAATGGATTCTTCT
CTTGTCCTAGCGCTTATCGCCGTCGCCTTGCCCGTGCTCCTCCATCTCCTAAAGAGGGGA
AAGACGCCATGGCGGCCGGCCGCGGCCAAGCTGCCGCCGGGCTCCCTTGGCCTGCCGGTG
ATCGGCCAGAGCATCGGTCTTCTCCGCGCCATGCGCGCCAACACTGCCGAGCGGTGGATC
CTGGACCGGATACACCGGTACGGTCCGGTGTCCAAGCTGTCGCTGTTCGGCAGGCCGACG
GTGCTCGTCGCGGGGTCGGCGGCCAACAGGTTCATCTTCTTCAGCAGCGCCTTAGCGATG
CAGCAGCCTCGGTCAGTGCAGCGGATCCTGGGGGACAAGAGCATCCTGGAGCTCACGGGC
GCCGACCACAAGCGGATCCGCGGCGCGCTGGTCGAGTTCCTCAAGCCGGACATGCTGAGG
CTGTACGTGGGCAAGATCGACGGCGAGGTTCGGCGCCACCTCGACGAGTGCTGGGCCGGC
CGCTGCACCGTCACGGTGATGCCGCACATGAAGAGGCTCACGTTCGACATCATCTCCCTG
CTGCTCTTCGGCCTCGAGCGGAGCCCGCTCCAGGACGCCCTCGCGGGCGACTTCGCCCGC
GTCATGGATGGCATATGGGCCGTCCCGGTGAACCTGCCGTTCACGGCGTTCAGCCGGAGC
CTCAGGGCCAGCGCCAGGGCTCGCCGGCTGATCGCGGGGATCGCGCGGGAGACCAGGGCC
AAGCTGGAAAGGGGCGAGGCCTCCCGTAGCAGCGACCTCATCGCGTGCCTGCTCAGTCTG
ACCGACCACAGCGGCGCGCGGCTGCTGAGCGAGGAGGAGATCGTGGACAACTCCATGGTG
GCCCTCGTCGCCGGTCACGACACGTCGTCAATTCTCATGACGTTCATGGTCCGCCACCTC
GCCAACGACCCGGACACCCTCGCCGCCATGGTCCAAGAGCACGACGAGATCGCAAAGAAC
AAGGGCGACGGCCAGACCCTGGACTGGGAGGACCTGGCGAAGATGAAGTACACGTGGCGC
GTCGCGCTGGAGACCCTTCGCTTGGTGCCTCCCATCTTCGGCAACTTCCGGCGAGCGATG
CAGGACATCGAGTTCGACGGCTACCTCATCCCAAAAGGATGGCAGGTGTTCTGGGCGGCG
AGCGTGACGCACATGGACACGGGCATCTTCCACGAGCCGGCAAAGTTCGACCCGTCCCGG
TTCGAGAACCAGTCGGCGGCATCGGCGCCGCCGTGCTCGTTCGTCGCGTTCGGCGGGGGT
CCGAGGATCTGCGTCGGCATGGAGTTCGCCAGGATCGAGACGCTGGTGACGATGCATTAC
CTTGTCAGGCGGTTTAGGTGGAAGCTCTGCTGCAAGAACGATACCTTCGCCAGGGACCCC
ATGCCATCGCCGCTGCACGGACTGCCCATAGAACTTGAGCAGAAGGCATCGCCATGATCG
TGACAAAATTTGGCGGCAGATATACATGGCAGTGCTTTTTAAGGATCAGGGAGTGGGGTG
GGGAGGAGATTAGCCCCTACTGGAAAATAAATTAACACGTAGAAAAATTAGCTCTACTGC
ATAAAAGAAAAAAACAAATCATGAAAATATATTTCATAATGCATCAAATGATATTAAGAG
CATATATAATGTGTGTTTTGAGCTGTGTCTTCAGACGCGTCTAAGGTGATAAATGTAAAA
AAAATCTAAGACATGTCTCTTGATGAAGTTATTATGTCTTGTCTCTATGCTCGAGACTGA
GGACTGACTAATTAGTCAATTTAATTTATTGAATAATTGATTGGTGTAATGAATATAGTA
AGACACA