Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021624_T024
CDS Infomation	cds chromosome:B73_RefGen_v4:7:158313067:158320940:-1 gene:Zm00001d021624 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA wybutosine-synthesizing protein 2/3/4
Sequence	ATGGATTTCGGTCGCCGGAAGGCGGCGGCGCTGGCTGCGCTCTCCTCGCCGACGCCGGAC AGGTCCCCGAAGGGCGGTGTCGACGCCCCGATCGCTCCGCTCCTCGATGCCCTCAACTCC CACCCGGACCTCTTCACTACCTCCTCCTGCTCCGGCCGCGTCTCCGTCCTCGCGCAGCCT CCGCCGCCGCATGAGGGCTGGGGCGAGGGCGCCCCCAAGCCGAAGAAGAAGGCGCGGGGC GGCGGGTGGGTATACGTATCGCACGACCCTGCCGATCCGGACGCTGCGGCGCTCGTCGCA GCCGCGATCGGTGCGGGGTTCCGGGAATCAGGTATCACAAGCTTGCAGAAACGTGCAATG GTAGCAATAAGATGCTCAATTCGCATGGAAGTGCCACTGGGGCAGATTGACGAACTTGTT GTTTCTCCGGAGTATGTCCGCTACCTTGTTAGAATTGCCAACAGTAAAATGGAGGCAAAT AAAAGGCGAATGAATGGATTTTTGGATCTCTTGCAAACTAAGGGTTTGTCATACCCATCA GGGTTATCAAACAACTCTAATAGTGGTGGTCAGTCTGATGATTACGAGGCTTCTGTGGGT CCTGAAGTTAAGATACCATCAGATACAAGTGCCAAAACAAATGATGAGTACTTAGTTACA AAAATGAGAAATGGTGGACGTAGTCGTGATGATGATGATACAGGTTCAATAGAAGCACAG TATTTTGGAAAACAAGACTCTGCATGGAGCCAGGGTGTCAATCATGGTTCTGGTAATGCT AAACGATTATTAACGCTGGAGAAGCTGCGAGAAAATAAAAATCATCTCTCTACCACAACA TTGAAGATTAGCGGTGAACCAATTGAGAAGCTCTTCTTATGGGGCCAAGCCTCTTGTGTG TTTACTATTGGAGAAGAGCAGCAGGTCCTAACTTTTGGTGGTTTTGGGGGACCAGGGCGA CATGCAAGGAGAAACTATTCCCTTCTACTCGATCACAAATCTGGTCTGTTGACAGAAATG ATCTTTAAAGCATCTCCTTCACCACGGATGGGGCATACAGTTACTGCAGTTGATAATACC ACTTATATAATTGGAGGTAGAGGTGGCCCTTCAGAAATTCTTGATGATGTCTGGATTTTG CCAAGTGTTGGGAATACATGGTCAAAACTGGAGTGTTGTGGAGATCTGTTCCGACCAAGG CACCGACATGCAGCTGCTGCAGTAGCTTCAAAAATTTATGTATTTGGCGGACTCAGTAAT GAAGGCATATATTCTTGTATGAATGTATTAGACACAAAAAATATGCAATGGAGTGTACTT GCTGCTTCAGGCGAATGGCCATGTGCTCGACATTCACATTCTATGGTCTCATATGGTACA AATCTATTCATGTTCGGAGGTCATGATGGCCAACGGGCACTGAAGGACTTCTACAGTTTT GATACAACAAAACTTAGGTGGAACAAGGAAAACACAAATGGGGGAACTCCGTCACCTAGA TTTTCACACTGCATGTTCATCTACAAAAATTATCTTGGGATACTTGGTGGCTGCCCTATT ACAGAAAACAATCAAGAAGTTACATTGCTGAACATAAATCATCGAGTCTGGTTTTGTGTT TCGGTTCCATTGCTGAGCCAGTCCCTCTGTGTCCGTAGTTCATCGGTTGTCATTAAAGAT GATCTTGTTATTTTAGGTGGTGGTGCATCTTGTTATGCATTCGGAACCAAATTCAGTCAA CCAATAGTTCTTGATCTGCATTCAGTGGAGTCTATGTTTAAATATGATAGGAACAAAGAT GGCACAGTTCAAAGGCGTGATGCAATATCTGTTGTTGAATTGTCAAGAGATGAACAAAAT GGCATCCTTGATCATGACACAAAATTACAAGATGCTTGTTCGGGTAGTTTGACGGACTCT AGCCCTCTGGTTCTTCAACTGGGGAAGACATATGCCAAATTAGCAAAGGACATTATGAAA AAGTTTGGATGGTTGGATCTTTCTAGAAAAGTTCGAATAAGTCATGATAATGGCCATGTT CTTTTTCCTATTAACGAATCTTTCTGTGCCCTAAATGCTGAAGAGCATATCAATAGGAAT CTTGATGATTCATGTACCTTTGGGGAATCATTAGTATTTTCTGAAAAGAAGCTTGTAGGG GACAACCTATCTCTTCAGGATGCATTAATTTTTTTTTCATCTTGCAATGGTTCCGTTATG AAAGATGAACTAGCCATCAGCCGAAAGCCTTCCAAGTCTCCTCAAACTATCATGAAAGAA CTTGTATCTTCTCTACTGGAAAGTAAAGGGATGCCCTCTCAGTTGTTGCAGCAGCTTCCG GCTAGGTGGGAGACACTTGGTGATATCGTCATACTTCCAAAGACATGTTTTAAGAATCCA TTGTGGGAATCTGTTAGCGAGGAACTTTGGCCACTAGTTGCCAAGTCACTTGGTGCACAA CGTCTTGCACGCCAAGGTAAAATCATGCCAAATGGCACAAGAGATAGTACACTGGAACTT CTTCTGGGTGATAACGGATGGGTTACCCATTATGAAAATGGCATCTGCTATTCACTTGAT GCAACAAAATGCATGTTTTCTTCTGGTAATCGTTCAGAGAAACTTCGCATGGGACAGCTA AACTGCAGAGATGAGGTGGTCGTGGATTTGTTTGCTGGAATTGGATATTTTGTTCTTCCA TTTCTTGTGAAGGCTAATGCCAAGCTAGTTTATGCATGTGAGTGGAATCCACATGCTCTG GAGGCTCTTCGGCGCAATGTTAGTGACAACAGAGTGGAGGATCGATGTATTATACTTGAA GGAGATAACCGGGTGACTGCACCCAAAAGTGTTGCTGATCGAGTCTGTCTTGGATTGTTA CCCTCAAGTGAATGTAGCTGGGCCACTGCTGTCGAAGCTTTAAGGGTTGGCGGGGGCGTG TTGCATATTCATGGGAATGTTAACGACTCTGATGAGACACGCTGGTTGGACAGTGTTGTT GAATCCATCAGTAATGTCGCCAAAAATCATGGACTATCTTGGAACGTGTCAGTGGAGCAT GTTGAACGTGTCAAATGGTACGGGCCGCGTATTCGCCACCTTGTAGTTGATGTTACATGC AGGCAAATCTAG

Peptide Sequence

PEP ID	Zm00001d021624_P024
PEP Infomation	pep chromosome:B73_RefGen_v4:7:158313067:158320940:-1 gene:Zm00001d021624 transcript:Zm00001d021624_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA wybutosine-synthesizing protein 2/3/4
Sequence	MDFGRRKAAALAALSSPTPDRSPKGGVDAPIAPLLDALNSHPDLFTTSSCSGRVSVLAQP PPPHEGWGEGAPKPKKKARGGGWVYVSHDPADPDAAALVAAAIGAGFRESGITSLQKRAM VAIRCSIRMEVPLGQIDELVVSPEYVRYLVRIANSKMEANKRRMNGFLDLLQTKGLSYPS GLSNNSNSGGQSDDYEASVGPEVKIPSDTSAKTNDEYLVTKMRNGGRSRDDDDTGSIEAQ YFGKQDSAWSQGVNHGSGNAKRLLTLEKLRENKNHLSTTTLKISGEPIEKLFLWGQASCV FTIGEEQQVLTFGGFGGPGRHARRNYSLLLDHKSGLLTEMIFKASPSPRMGHTVTAVDNT TYIIGGRGGPSEILDDVWILPSVGNTWSKLECCGDLFRPRHRHAAAAVASKIYVFGGLSN EGIYSCMNVLDTKNMQWSVLAASGEWPCARHSHSMVSYGTNLFMFGGHDGQRALKDFYSF DTTKLRWNKENTNGGTPSPRFSHCMFIYKNYLGILGGCPITENNQEVTLLNINHRVWFCV SVPLLSQSLCVRSSSVVIKDDLVILGGGASCYAFGTKFSQPIVLDLHSVESMFKYDRNKD GTVQRRDAISVVELSRDEQNGILDHDTKLQDACSGSLTDSSPLVLQLGKTYAKLAKDIMK KFGWLDLSRKVRISHDNGHVLFPINESFCALNAEEHINRNLDDSCTFGESLVFSEKKLVG DNLSLQDALIFFSSCNGSVMKDELAISRKPSKSPQTIMKELVSSLLESKGMPSQLLQQLP ARWETLGDIVILPKTCFKNPLWESVSEELWPLVAKSLGAQRLARQGKIMPNGTRDSTLEL LLGDNGWVTHYENGICYSLDATKCMFSSGNRSEKLRMGQLNCRDEVVVDLFAGIGYFVLP FLVKANAKLVYACEWNPHALEALRRNVSDNRVEDRCIILEGDNRVTAPKSVADRVCLGLL PSSECSWATAVEALRVGGGVLHIHGNVNDSDETRWLDSVVESISNVAKNHGLSWNVSVEH VERVKWYGPRIRHLVVDVTCRQI

Transcript Sequence

Transcript ID	Zm00001d021624_T024
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:158313067:158320940:-1 gene:Zm00001d021624 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA wybutosine-synthesizing protein 2/3/4
Sequence	CTAGCACGCCTGTACCTAAACCTCGCAAAAGCCTAACCCAAACCCTAGCACCTCTCGAAA TCTCCCCGCGAAAGACAGCCTTCTGGTCACATGGATTTCGGTCGCCGGAAGGCGGCGGCG CTGGCTGCGCTCTCCTCGCCGACGCCGGACAGGTCCCCGAAGGGCGGTGTCGACGCCCCG ATCGCTCCGCTCCTCGATGCCCTCAACTCCCACCCGGACCTCTTCACTACCTCCTCCTGC TCCGGCCGCGTCTCCGTCCTCGCGCAGCCTCCGCCGCCGCATGAGGGCTGGGGCGAGGGC GCCCCCAAGCCGAAGAAGAAGGCGCGGGGCGGCGGGTGGGTATACGTATCGCACGACCCT GCCGATCCGGACGCTGCGGCGCTCGTCGCAGCCGCGATCGGTGCGGGGTTCCGGGAATCA GGTATCACAAGCTTGCAGAAACGTGCAATGGTAGCAATAAGATGCTCAATTCGCATGGAA GTGCCACTGGGGCAGATTGACGAACTTGTTGTTTCTCCGGAGTATGTCCGCTACCTTGTT AGAATTGCCAACAGTAAAATGGAGGCAAATAAAAGGCGAATGAATGGATTTTTGGATCTC TTGCAAACTAAGGGTTTGTCATACCCATCAGGGTTATCAAACAACTCTAATAGTGGTGGT CAGTCTGATGATTACGAGGCTTCTGTGGGTCCTGAAGTTAAGATACCATCAGATACAAGT GCCAAAACAAATGATGAGTACTTAGTTACAAAAATGAGAAATGGTGGACGTAGTCGTGAT GATGATGATACAGGTTCAATAGAAGCACAGTATTTTGGAAAACAAGACTCTGCATGGAGC CAGGGTGTCAATCATGGTTCTGGTAATGCTAAACGATTATTAACGCTGGAGAAGCTGCGA GAAAATAAAAATCATCTCTCTACCACAACATTGAAGATTAGCGGTGAACCAATTGAGAAG CTCTTCTTATGGGGCCAAGCCTCTTGTGTGTTTACTATTGGAGAAGAGCAGCAGGTCCTA ACTTTTGGTGGTTTTGGGGGACCAGGGCGACATGCAAGGAGAAACTATTCCCTTCTACTC GATCACAAATCTGGTCTGTTGACAGAAATGATCTTTAAAGCATCTCCTTCACCACGGATG GGGCATACAGTTACTGCAGTTGATAATACCACTTATATAATTGGAGGTAGAGGTGGCCCT TCAGAAATTCTTGATGATGTCTGGATTTTGCCAAGTGTTGGGAATACATGGTCAAAACTG GAGTGTTGTGGAGATCTGTTCCGACCAAGGCACCGACATGCAGCTGCTGCAGTAGCTTCA AAAATTTATGTATTTGGCGGACTCAGTAATGAAGGCATATATTCTTGTATGAATGTATTA GACACAAAAAATATGCAATGGAGTGTACTTGCTGCTTCAGGCGAATGGCCATGTGCTCGA CATTCACATTCTATGGTCTCATATGGTACAAATCTATTCATGTTCGGAGGTCATGATGGC CAACGGGCACTGAAGGACTTCTACAGTTTTGATACAACAAAACTTAGGTGGAACAAGGAA AACACAAATGGGGGAACTCCGTCACCTAGATTTTCACACTGCATGTTCATCTACAAAAAT TATCTTGGGATACTTGGTGGCTGCCCTATTACAGAAAACAATCAAGAAGTTACATTGCTG AACATAAATCATCGAGTCTGGTTTTGTGTTTCGGTTCCATTGCTGAGCCAGTCCCTCTGT GTCCGTAGTTCATCGGTTGTCATTAAAGATGATCTTGTTATTTTAGGTGGTGGTGCATCT TGTTATGCATTCGGAACCAAATTCAGTCAACCAATAGTTCTTGATCTGCATTCAGTGGAG TCTATGTTTAAATATGATAGGAACAAAGATGGCACAGTTCAAAGGCGTGATGCAATATCT GTTGTTGAATTGTCAAGAGATGAACAAAATGGCATCCTTGATCATGACACAAAATTACAA GATGCTTGTTCGGGTAGTTTGACGGACTCTAGCCCTCTGGTTCTTCAACTGGGGAAGACA TATGCCAAATTAGCAAAGGACATTATGAAAAAGTTTGGATGGTTGGATCTTTCTAGAAAA GTTCGAATAAGTCATGATAATGGCCATGTTCTTTTTCCTATTAACGAATCTTTCTGTGCC CTAAATGCTGAAGAGCATATCAATAGGAATCTTGATGATTCATGTACCTTTGGGGAATCA TTAGTATTTTCTGAAAAGAAGCTTGTAGGGGACAACCTATCTCTTCAGGATGCATTAATT TTTTTTTCATCTTGCAATGGTTCCGTTATGAAAGATGAACTAGCCATCAGCCGAAAGCCT TCCAAGTCTCCTCAAACTATCATGAAAGAACTTGTATCTTCTCTACTGGAAAGTAAAGGG ATGCCCTCTCAGTTGTTGCAGCAGCTTCCGGCTAGGTGGGAGACACTTGGTGATATCGTC ATACTTCCAAAGACATGTTTTAAGAATCCATTGTGGGAATCTGTTAGCGAGGAACTTTGG CCACTAGTTGCCAAGTCACTTGGTGCACAACGTCTTGCACGCCAAGGTAAAATCATGCCA AATGGCACAAGAGATAGTACACTGGAACTTCTTCTGGGTGATAACGGATGGGTTACCCAT TATGAAAATGGCATCTGCTATTCACTTGATGCAACAAAATGCATGTTTTCTTCTGGTAAT CGTTCAGAGAAACTTCGCATGGGACAGCTAAACTGCAGAGATGAGGTGGTCGTGGATTTG TTTGCTGGAATTGGATATTTTGTTCTTCCATTTCTTGTGAAGGCTAATGCCAAGCTAGTT TATGCATGTGAGTGGAATCCACATGCTCTGGAGGCTCTTCGGCGCAATGTTAGTGACAAC AGAGTGGAGGATCGATGTATTATACTTGAAGGAGATAACCGGGTGACTGCACCCAAAAGT GTTGCTGATCGAGTCTGTCTTGGATTGTTACCCTCAAGTGAATGTAGCTGGGCCACTGCT GTCGAAGCTTTAAGGGTTGGCGGGGGCGTGTTGCATATTCATGGGAATGTTAACGACTCT GATGAGACACGCTGGTTGGACAGTGTTGTTGAATCCATCAGTAATGTCGCCAAAAATCAT GGACTATCTTGGAACGTGTCAGTGGAGCATGTTGAACGTGTCAAATGGTACGGGCCGCGT ATTCGCCACCTTGTAGTTGATGTTACATGCAGGCAAATCTAGCAAAGCAGATGCGTTCAC AGAATCTTTGTGCACTGTCAGGCCTTGGATTCTTGGATAGTTGGATGCATATATCATTGC AGATTGTAATGCTCAACAGCTTGCATCGTTTGTGTTTTAGTCTTAAGTGGGTTACAGTAC TCTTAGTCATCATGGAGCCCTCTGTTGTGACCTTGAAAGCATGTTCAGGTTCTTGACGAC AGTTTCGCAACTGTATTGCTACTGTAAAGTTGTGTTCTTGGACCGAGTGTATTTATCTTA TGTATCTTTTGTTTTCT