Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021615_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:7:158111624:158115589:-1 gene:Zm00001d021615 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine protease4 description:Cathepsin B-like cysteine proteinase 3
Sequence	ATGGGCGGCGAACTGCTGCTTGCGCTCCTCCTCGTCTCTGCTGCTGCCGCCCCTCAGGTA CTTGGAGTTGGCAATGGAGACAATCACATGAGAATCATCCAGGAGGACATCATTGAGACA GTCAACAACCATCCCAGTGCTGGGTGGACAGCCTCACGTAATCCTTACTTTTCAAACTAT ACCATTGCGCAATTTAAGCACATACTTGGAGTGAAACCAGCACCACAGAATGCACTAAGC AATGTTCCTGTCAAAACTTATTCAAGATCACTGGAACTTCCAAAAGAGTTTGACGCTAGA TCTGCATGGTCCCGTTGCAGCACAATTGGGAACATACTTGAACAGGGTCACTGTGGCTCT TGTTGGGCTTTTGGTGCTGTGGAGTGCCTCCAGGACCGTTTTTGCATTCACCTCAACATG AGCATTTTACTTTCAGTCAATGACCTACTGGCATGCTGCGGTTTTATGTGCGGCGATGGG TGTGATGGAGGCTATCCTATAGAGGCATGGCGCTACTTTGTTCAAAATGGTGTTGTTACG GATGAGTGTGATCCATACTTCGACCCGGTCGGTTGCAAGCATCCTGGATGCGAACCTGCT TATCCTACACCAAAGTGTGAAAAGAAATGCAAGGAGCAGAACCAAGTTTGGCAGGAAAAG AAGCATTTCAGCATTGATGCGTACAGAATAAATTCAGATCCACATGACATAATGGCAGAG GTCTACAAAAATGGTCCTGTAGAAGTTGCTTTCACAGTTTACGAGGATTTCGCACACTAC AAATCTGGAGTGTACAAGCACATCACCGGTGGCATTATGGGTGGCCATGCCGTCAAGTTG ATTGGATGGGGAACCAGTGATGCTGGAGAGGATTACTGGCTTCTGGCAAATCAGTGGAAT AGAGGCTGGGGCGATGATGGATACTTCAAGATCATAAGGGGCAAAAATGAATGTGGCATC GAGGAGGGCGTTGTTGCTGGAATGCCATCGACAAAGAATATGGTTCCAAACTTCGGCGGT GCCGTTGGAAGAGCTATAGTTTAA

Peptide Sequence

PEP ID	Zm00001d021615_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:7:158111624:158115589:-1 gene:Zm00001d021615 transcript:Zm00001d021615_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine protease4 description:Cathepsin B-like cysteine proteinase 3
Sequence	MGGELLLALLLVSAAAAPQVLGVGNGDNHMRIIQEDIIETVNNHPSAGWTASRNPYFSNY TIAQFKHILGVKPAPQNALSNVPVKTYSRSLELPKEFDARSAWSRCSTIGNILEQGHCGS CWAFGAVECLQDRFCIHLNMSILLSVNDLLACCGFMCGDGCDGGYPIEAWRYFVQNGVVT DECDPYFDPVGCKHPGCEPAYPTPKCEKKCKEQNQVWQEKKHFSIDAYRINSDPHDIMAE VYKNGPVEVAFTVYEDFAHYKSGVYKHITGGIMGGHAVKLIGWGTSDAGEDYWLLANQWN RGWGDDGYFKIIRGKNECGIEEGVVAGMPSTKNMVPNFGGAVGRAIV

Transcript Sequence

Transcript ID	Zm00001d021615_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:158111624:158115589:-1 gene:Zm00001d021615 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cysteine protease4 description:Cathepsin B-like cysteine proteinase 3
Sequence	AAGGTACTGGATCGACAGCTCCAAGCTCATTCCATGATTTCGATCTCGCTTGTGTACTGT ACTCGGGCCTGGAGCTTGTTCTGATCCGATCCTGCCTTCCTGCTCGGCGCCCGCCCGCCC CACTTATTCGATTCCATCTCGTGTTCCTCTGTGCTGCTGCAGGGGGAGGGGGAGGACCAA GCGAAAGGGGGAACTAGAGCAAGATGGGCGGCGAACTGCTGCTTGCGCTCCTCCTCGTCT CTGCTGCTGCCGCCCCTCAGGTACTTGGAGTTGGCAATGGAGACAATCACATGAGAATCA TCCAGGAGGACATCATTGAGACAGTCAACAACCATCCCAGTGCTGGGTGGACAGCCTCAC GTAATCCTTACTTTTCAAACTATACCATTGCGCAATTTAAGCACATACTTGGAGTGAAAC CAGCACCACAGAATGCACTAAGCAATGTTCCTGTCAAAACTTATTCAAGATCACTGGAAC TTCCAAAAGAGTTTGACGCTAGATCTGCATGGTCCCGTTGCAGCACAATTGGGAACATAC TTGAACAGGGTCACTGTGGCTCTTGTTGGGCTTTTGGTGCTGTGGAGTGCCTCCAGGACC GTTTTTGCATTCACCTCAACATGAGCATTTTACTTTCAGTCAATGACCTACTGGCATGCT GCGGTTTTATGTGCGGCGATGGGTGTGATGGAGGCTATCCTATAGAGGCATGGCGCTACT TTGTTCAAAATGGTGTTGTTACGGATGAGTGTGATCCATACTTCGACCCGGTCGGTTGCA AGCATCCTGGATGCGAACCTGCTTATCCTACACCAAAGTGTGAAAAGAAATGCAAGGAGC AGAACCAAGTTTGGCAGGAAAAGAAGCATTTCAGCATTGATGCGTACAGAATAAATTCAG ATCCACATGACATAATGGCAGAGGTCTACAAAAATGGTCCTGTAGAAGTTGCTTTCACAG TTTACGAGGATTTCGCACACTACAAATCTGGAGTGTACAAGCACATCACCGGTGGCATTA TGGGTGGCCATGCCGTCAAGTTGATTGGATGGGGAACCAGTGATGCTGGAGAGGATTACT GGCTTCTGGCAAATCAGTGGAATAGAGGCTGGGGCGATGATGGATACTTCAAGATCATAA GGGGCAAAAATGAATGTGGCATCGAGGAGGGCGTTGTTGCTGGAATGCCATCGACAAAGA ATATGGTTCCAAACTTCGGCGGTGCCGTTGGAAGAGCTATAGTTTAATTGGTTACGTTTG CATGGCCTCAAATGCTGTTGGAATTAACTAAAGTAATTTTAAAATGCAATTGTTAAATGG CCACGATGGTGTATGTATTTTGTACACTAGCTCATTCCAAAGGTCGTTATGTTGCTGATG CCACATCACTTTGGTCAAGTGGAATAATATTAATAAGAACTAGAATTTCGAT