Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021553_T072
CDS Infomation

cds chromosome:B73_RefGen_v4:7:155740881:155748398:1 gene:Zm00001d021553 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of nonsense transcripts 1 homolog
Sequence

ATGACGAAAGAGTCACAGAGCAAGGATAATGTAACTGTCCGGTGGGATATTGGGTTGAAC
AAGAAGCGTGTAGCTTACTTTGTCTTTCCAAAGGAAGACAATGAGTTGAGGCTTGTGCCT
GGAGATGAGCTACGCTTGAGATATCCTGGTGATAGCTCACATCCCACATGGCAATCTGTG
GGACATGTGATTAAGCTCACTGCACAAGAGGAGGTGGCACTTGAGCTTCGTGCAAGTCAG
GGGGTGCCTACTGAGCTAAACGTTGGATTCAGTGTTGATTTCGTTTGGAAGAGTACCAGT
TTTGATAGGATGCAAGGAGCAATGAAAACTTTTGCTGTGGACGAGACAAGTGTCAGTGGA
TACATATACCACCACCTTTTGGGACATGAAGTTGAGCATCAAATAATACGTAACACCCTA
CCAAGACGCTTTGGTGCACCTGGACTTCCAGAACTAAATGCTTCCCAGGTTTTAGCAGTT
AAAAGTGTCCTGCAGAAGCCAGTTAGTTTGATTCAAGGTCCACCTGGCACTGGAAAAACT
GTCACATCTGGTGCAATTGTGTATCACATGGCCAAACAAGGTCAAGGACAGGTTCTTGTA
TGTGCCCCAAGTAATGTTGCTGTTGATCAGCTGGCAGAGAAGATAAGCTCAACCGGTCTC
AAGGTTGTTAGGCTGTGTGCAAAATCTAGAGAAGCTGTTTCGTCTCCTGTTGAGCATCTC
ACACTTCATTATCAGGTTAGGCACCTTGATACCTCTGAAAAGAGTGAATTTCACAAGTTA
CAGCAACTGAAAGATGAACAAGGTGAATTGTCCAGCAGTGATGAGAAGAAGTACAAGGCA
CTAAAGCGTGCCACTGAAAGAGAGATACTGCAGAGTGCTGATGTCATTTGTTGCACCTGT
GTCGGTGCTGGAGATCCTCGTCTTTCAAACTTCCGTTTCCGACAAGTTCTTATTGATGAG
TCCACACAGGCAACAGAGCCTGAATGTCTTATTCCTTTGGTGCTTGGTGTCAAGCAGGTT
GTCCTTGTCGGAGATCATTGCCAATTGGGTCCTGTCATCATGTGCAAAAAAGCAGCCCGT
GCAGGATTAGCACAATCTCTCTTTGAACGCCTTGTTATCCTTGGAGTGAAGCCATTCAGG
CTACAGGTCCAGTATAGAATGCATCCATGCCTCTCAGAGTTTCCATCCAACTGCTTTTAT
GAAGGCACACTGCAAAATGGAGTGACTGTTAATGAGAGGCATTCGTCTGGAATTGATTTT
CCTTGGCCTGTTCCAAATCGCCCAATGTTCTTCTATGTGCAGATGGGACAAGAAGAAATC
AGTGCTAGTGGGACATCGTATCTCAATAGAACTGAAGCTGCAAATGTTGAAAAAATTGTA
ACAACTTTTTTAAGAAGTGGTGTTGTACCAAGCCAGATCGGAGTTATCACACCTTATGAA
GGGCAAAGGGCATACATTGTAAATTACATGTCAAGGAATGGCTCTCTTCGCCAACAACTT
TACAAGGAAATCGAGGTCGCTAGTGTAGACTCATTTCAGGGTAGAGAGAAAGACTACATT
ATTCTATCTTGTGTTAGAAGCAATGAGCACCAGGGAATTGGGTTTCTCAATGACCCGCGC
AGGTTAAACGTTGCGTTAACTCGTGCACGTTATGGCATAGTTATTCTTGGTAATCCAAAA
GTACTAAGCAAGCAGCCACTTTGGAATAGCTTGTTGACACATTACAAGGAGCATGAGTGC
TTGGTAGAAGGACCTCTGAACAACTTAAAGCAGAGCATGGTGCAGTTTCAGAAGCCCAAA
AAGATATATAATGATCGGAGATTGTTACTGGGCGGTGCTCAAGGCATGCATGGAGCTAAC
TTCGGGGCTGGGGCCTCAAGCCAAGCAGCAGATAAGAGAAGTGGCAGGGGGAAAGCAGGG
CAATCATTTGTTTCTTATGGCCCTCCAAATGGGGTGCACAAGCCTGGTGTGCACCCAGCA
GGTTATGCTGTACCTCGTATGCCTTTTCCTCCATTTCCTGGGGCTCCACATTCTCAACCA
TATGCAATTCCGACTCGGGGTTTGCATGGGCCCATTGGAGCTGTTCCACCGGTGCATCAA
CCTGGAAGTAGAAGTTTTGGGGCACCTCGTTCAAATACTGGTGGGCCTATTGGTGGCCAC
CTTGCTCATCAACAGAATTCCCAGCAAGCTATGGGTGGCATTGGGTCAAATTTTAACTAC
GCTGGCATGGAGAATTCGAGTAGTCAGCCTTCTGGTGTAGCCCAAATGTCCCAATCGGGA
TTAATGACACAGATGCCTGTTCAAGGACTAAGTCAAACATTCCGTGATGGTTTTTCCATT
GGTGGGATGTCTCAGGACTTCATTGTAGATGATTTTAAGAGCCAAGGATCACATGTGCCA
TACAACATTGCAGAATTTTCTACCCAGGCTTCTCAAGGTGGTTATGGTGTTGAGTTTACT
CAAGCGCCCCAATCTGGATACTCTGGGAATTATATGAACCAAAACACACATCCTGGATAC
TCCCATATTGGTACAACAAATGACATTGTATCTCAGGATCACATGGCCCATGGATCTCAC
GGAATGTTTACGCAAGTGGGGTATAATGATCCGTCGCAAGATGAGTCATCTCAGATTCAT
TATGGAATGGCTGCTGCTGGTCCCCTACATTCGCAGAGCATGATGAACCCCTTATACTCT
CAATCCTATGCTCACTACAACACCCAGCCACATTCTCTTCAACCTCCTCCCCAGTGA

Peptide Sequence

PEP ID

Zm00001d021553_P072
PEP Infomation

pep chromosome:B73_RefGen_v4:7:155740881:155748398:1 gene:Zm00001d021553 transcript:Zm00001d021553_T072 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of nonsense transcripts 1 homolog
Sequence

MTKESQSKDNVTVRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQSV
GHVIKLTAQEEVALELRASQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG
YIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKT
VTSGAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHL
TLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTC
VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAAR
AGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDF
PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE
GQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR
RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK
KIYNDRRLLLGGAQGMHGANFGAGASSQAADKRSGRGKAGQSFVSYGPPNGVHKPGVHPA
GYAVPRMPFPPFPGAPHSQPYAIPTRGLHGPIGAVPPVHQPGSRSFGAPRSNTGGPIGGH
LAHQQNSQQAMGGIGSNFNYAGMENSSSQPSGVAQMSQSGLMTQMPVQGLSQTFRDGFSI
GGMSQDFIVDDFKSQGSHVPYNIAEFSTQASQGGYGVEFTQAPQSGYSGNYMNQNTHPGY
SHIGTTNDIVSQDHMAHGSHGMFTQVGYNDPSQDESSQIHYGMAAAGPLHSQSMMNPLYS
QSYAHYNTQPHSLQPPPQ

Transcript Sequence

Transcript ID

Zm00001d021553_T072
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:155740881:155748398:1 gene:Zm00001d021553 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of nonsense transcripts 1 homolog
Sequence

ATTAACAAAGTGGAAGAGCTTTGGAAGACAAATCCTGATGCATCTCTTGAAGATCTTGAA
AAGCCTGGCGTAGATGATGAACCTCAGCCAGTTGTTTTGAAGTATGAAGATGCTTACCAG
TACCAAAATGTTTTTGCGCCACTGATAAAACTTGAGGCTGATTATGACAAGATGACGAAA
GAGTCACAGAGCAAGGATAATGTAACTGTCCGGTGGGATATTGGGTTGAACAAGAAGCGT
GTAGCTTACTTTGTCTTTCCAAAGGAAGACAATGAGTTGAGGCTTGTGCCTGGAGATGAG
CTACGCTTGAGATATCCTGGTGATAGCTCACATCCCACATGGCAATCTGTGGGACATGTG
ATTAAGCTCACTGCACAAGAGGAGGTGGCACTTGAGCTTCGTGCAAGTCAGGGGGTGCCT
ACTGAGCTAAACGTTGGATTCAGTGTTGATTTCGTTTGGAAGAGTACCAGTTTTGATAGG
ATGCAAGGAGCAATGAAAACTTTTGCTGTGGACGAGACAAGTGTCAGTGGATACATATAC
CACCACCTTTTGGGACATGAAGTTGAGCATCAAATAATACGTAACACCCTACCAAGACGC
TTTGGTGCACCTGGACTTCCAGAACTAAATGCTTCCCAGGTTTTAGCAGTTAAAAGTGTC
CTGCAGAAGCCAGTTAGTTTGATTCAAGGTCCACCTGGCACTGGAAAAACTGTCACATCT
GGTGCAATTGTGTATCACATGGCCAAACAAGGTCAAGGACAGGTTCTTGTATGTGCCCCA
AGTAATGTTGCTGTTGATCAGCTGGCAGAGAAGATAAGCTCAACCGGTCTCAAGGTTGTT
AGGCTGTGTGCAAAATCTAGAGAAGCTGTTTCGTCTCCTGTTGAGCATCTCACACTTCAT
TATCAGGTTAGGCACCTTGATACCTCTGAAAAGAGTGAATTTCACAAGTTACAGCAACTG
AAAGATGAACAAGGTGAATTGTCCAGCAGTGATGAGAAGAAGTACAAGGCACTAAAGCGT
GCCACTGAAAGAGAGATACTGCAGAGTGCTGATGTCATTTGTTGCACCTGTGTCGGTGCT
GGAGATCCTCGTCTTTCAAACTTCCGTTTCCGACAAGTTCTTATTGATGAGTCCACACAG
GCAACAGAGCCTGAATGTCTTATTCCTTTGGTGCTTGGTGTCAAGCAGGTTGTCCTTGTC
GGAGATCATTGCCAATTGGGTCCTGTCATCATGTGCAAAAAAGCAGCCCGTGCAGGATTA
GCACAATCTCTCTTTGAACGCCTTGTTATCCTTGGAGTGAAGCCATTCAGGCTACAGGTC
CAGTATAGAATGCATCCATGCCTCTCAGAGTTTCCATCCAACTGCTTTTATGAAGGCACA
CTGCAAAATGGAGTGACTGTTAATGAGAGGCATTCGTCTGGAATTGATTTTCCTTGGCCT
GTTCCAAATCGCCCAATGTTCTTCTATGTGCAGATGGGACAAGAAGAAATCAGTGCTAGT
GGGACATCGTATCTCAATAGAACTGAAGCTGCAAATGTTGAAAAAATTGTAACAACTTTT
TTAAGAAGTGGTGTTGTACCAAGCCAGATCGGAGTTATCACACCTTATGAAGGGCAAAGG
GCATACATTGTAAATTACATGTCAAGGAATGGCTCTCTTCGCCAACAACTTTACAAGGAA
ATCGAGGTCGCTAGTGTAGACTCATTTCAGGGTAGAGAGAAAGACTACATTATTCTATCT
TGTGTTAGAAGCAATGAGCACCAGGGAATTGGGTTTCTCAATGACCCGCGCAGGTTAAAC
GTTGCGTTAACTCGTGCACGTTATGGCATAGTTATTCTTGGTAATCCAAAAGTACTAAGC
AAGCAGCCACTTTGGAATAGCTTGTTGACACATTACAAGGAGCATGAGTGCTTGGTAGAA
GGACCTCTGAACAACTTAAAGCAGAGCATGGTGCAGTTTCAGAAGCCCAAAAAGATATAT
AATGATCGGAGATTGTTACTGGGCGGTGCTCAAGGCATGCATGGAGCTAACTTCGGGGCT
GGGGCCTCAAGCCAAGCAGCAGATAAGAGAAGTGGCAGGGGGAAAGCAGGGCAATCATTT
GTTTCTTATGGCCCTCCAAATGGGGTGCACAAGCCTGGTGTGCACCCAGCAGGTTATGCT
GTACCTCGTATGCCTTTTCCTCCATTTCCTGGGGCTCCACATTCTCAACCATATGCAATT
CCGACTCGGGGTTTGCATGGGCCCATTGGAGCTGTTCCACCGGTGCATCAACCTGGAAGT
AGAAGTTTTGGGGCACCTCGTTCAAATACTGGTGGGCCTATTGGTGGCCACCTTGCTCAT
CAACAGAATTCCCAGCAAGCTATGGGTGGCATTGGGTCAAATTTTAACTACGCTGGCATG
GAGAATTCGAGTAGTCAGCCTTCTGGTGTAGCCCAAATGTCCCAATCGGGATTAATGACA
CAGATGCCTGTTCAAGGACTAAGTCAAACATTCCGTGATGGTTTTTCCATTGGTGGGATG
TCTCAGGACTTCATTGTAGATGATTTTAAGAGCCAAGGATCACATGTGCCATACAACATT
GCAGAATTTTCTACCCAGGCTTCTCAAGGTGGTTATGGTGTTGAGTTTACTCAAGCGCCC
CAATCTGGATACTCTGGGAATTATATGAACCAAAACACACATCCTGGATACTCCCATATT
GGTACAACAAATGACATTGTATCTCAGGATCACATGGCCCATGGATCTCACGGAATGTTT
ACGCAAGTGGGGTATAATGATCCGTCGCAAGATGAGTCATCTCAGATTCATTATGGAATG
GCTGCTGCTGGTCCCCTACATTCGCAGAGCATGATGAACCCCTTATACTCTCAATCCTAT
GCTCACTACAACACCCAGCCACATTCTCTTCAACCTCCTCCCCAGTGATAATTAAGGCTT
GTGATATGGTGAAGCCACATTTTGGAAGTTTGGTGGGTTGCATCTTTTGGCCCACATGTT
GTGCCCTTCTCTGCTATTTCAGAATCGATGGTGCATAGACATCAGATGCAAGCAATGTGA
ACAAGCATATGACACACTTTGTATTGGATGTTTATCGGGGCAGGCTTCGCCGAGGAGCAC
AAGGATTGCAATGTATCATGTTCTTGATCGTTGTGGTTCACTACCCGTTTAGACCACAAG
AGGGGTCATATTGTGCATCGGAAGAGGTTGGCGGCACTATCCTCATCCCTCACCTGTATA
TAAAGGCAATCTGGGCCTATAGTGGTACAATGTGAACATATTCCAGGATTTGCTGCCACT
CAAGTCAAGTTGCAGCAATTGCATGCCTCCATGGTGTAGAGTGGCTTTGTATAAAGGTGC
TATAGGTTGGGTGGCCACAACCCTTTTGGATATCACACATGACAAGATATTTACCTTTAC
AT