Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021524_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:155139095:155151352:1 gene:Zm00001d021524 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein VASCULAR ASSOCIATED DEATH 1 chloroplastic
Sequence	ATGGCCGCACCCGCGGTTGCCTCCCCGAGCCGGGCGACCCCCACCGACATCCCCACCGCC GCGCCCTCTCCCGCCTCCCCGCCGCGCCGCCTTGCGTCGGCGCCGCCCGCCGTCGACGCG TCCGGGTCCTCCTCCCCGGCCTCCGCCCATTCGGGGGACCAGCTCTCCGCCCCCGACGCC TCGAGCCCGCTGCTCGCGAGCAGGAGCGAGGAGTACAGGCTTCTGTTCCGGCTGCCGCCC GACGAGGTTCTCGTGCAAGATTTTAACTGCGCTGTCCAAGAAAATATTCTTCTTCAGGGA CATATGTATTTATTTCTTCACCATATATGTTTCTACTCTAACATATTTGGATATGAGACA AAGAAAACAATACCTTTGCAAGAGGTAACTGATGTTCGTAAAGCAAAGACAGCTGCCATT TTTCATAATGCCATTGAAATTGTTGCTGGTAGTAGAAGGCATTTTTTTGGATCTTTCTTG TCACGTGATGAAGCCTATCGAATTATAGTAGATGGCTGGGAACAACATGTTAGTGATGCA AGATTGCTCCTTGAACGTCAGGAGACAAAGTCAGCTAGTAGCAGTGAAGAAAATGGTTAT GTTGTATTGGAAGGAACAAAGGAATCTAAACAAGATGGAGATTTATCACTGCCGGACAGG TCTGTCAACAGTACAGCTGTCTCAAGTAGCAATGCTGATGGTGGTGATTCGAACATCAAC ATTTCCAAAAGGTTTTCAGAAGTTGAGGAGAACGGACTTGAAGACAACATCGTCGCGCTA AACCCATTCAATTTGGAGCCAGTTGATGCTCCTCCTAGTGTACCTGAATCTTACACTATG ATCTCGGAGTCGAAGTTTCAGGTGCCTGTGGAGGTTCTCTTTAATTTCTTGTTGTCTGAT GGTGCTTTTGGCTTTGTGGATGATTTCCACACAAAATGTGGTGACAAAGAATTTAGTTGC TCCAAATGGCGTACAGATGAGCAAGGGGGACTTGTAAGGGATGTCTCATTTTTGCATCCA ATAAAAATTTATCTTGGTGCAAAATTTGGGACTTGTCAAGAGGTTCAGAAACTTCGTCTT TACAAAAACAGGCGTCTAGTCATTCAAACCTCTCAATCAATAGGTGATGCCCCATATGGG GACCATTTTACTGTAGAGGGCATCTGGGATGTTGAACAAGATAGCCTAGATGAGAACTGT TGTGACCTCAGGATATACATCAATGTAGCCTTCTCAAAGAAAACAATATTTAGAGGGAAA ATAGAGCAGTCAACAAAAGATGAATGCCGGGAAGTTTTCAGTCTCTGGATTAAGCTCGGT CATGATCTTTTGAAGCAGGAGTATGATCGATCAAAAGGCGCCTCCAGCACACCTGATTCT GGTGTTCAACCAGGGGCTACAACAAACGAGGAAAGTGCCGTGGAAGTAGCAGTTCCAGTG GTGAGTTCCTCACATGATGAATCTGGTGCGAGAAGCCTCATTCCTCCTACTCAAGATCAC CAGCAGAGGACAGGAAGAGATCCTTCCATCACGTCCACTTCACAAGAATTGTGGGGTTCT CTATCGTCATACATGAGGTCAAGGCAACTTGGTCCAGTACTAGCAATGTCACTGGTAGCT CTCATTATCCTAATGCAGGTGACCATCATAGTTCTACTAACAAGACCCCCCCAGGTCCAA ATGGATCCTCATGGGATCTGGACGGGCAGTTCAGGGTACAGCAAAGAAAGCATAGAGTGG GTGCAGAAGCGCCTCAGCTTACTAAGCGAGGAGATGCAGCTCGCGGAGGCACACATGGAG ACGATGAGGCGCGAGTTTGCCTGGCTCAGGTCTTACCTGGAGAGACTGCAGAGGACGCGG GGCAGCACATGA

Peptide Sequence

PEP ID	Zm00001d021524_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:155139095:155151352:1 gene:Zm00001d021524 transcript:Zm00001d021524_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein VASCULAR ASSOCIATED DEATH 1 chloroplastic
Sequence	MAAPAVASPSRATPTDIPTAAPSPASPPRRLASAPPAVDASGSSSPASAHSGDQLSAPDA SSPLLASRSEEYRLLFRLPPDEVLVQDFNCAVQENILLQGHMYLFLHHICFYSNIFGYET KKTIPLQEVTDVRKAKTAAIFHNAIEIVAGSRRHFFGSFLSRDEAYRIIVDGWEQHVSDA RLLLERQETKSASSSEENGYVVLEGTKESKQDGDLSLPDRSVNSTAVSSSNADGGDSNIN ISKRFSEVEENGLEDNIVALNPFNLEPVDAPPSVPESYTMISESKFQVPVEVLFNFLLSD GAFGFVDDFHTKCGDKEFSCSKWRTDEQGGLVRDVSFLHPIKIYLGAKFGTCQEVQKLRL YKNRRLVIQTSQSIGDAPYGDHFTVEGIWDVEQDSLDENCCDLRIYINVAFSKKTIFRGK IEQSTKDECREVFSLWIKLGHDLLKQEYDRSKGASSTPDSGVQPGATTNEESAVEVAVPV VSSSHDESGARSLIPPTQDHQQRTGRDPSITSTSQELWGSLSSYMRSRQLGPVLAMSLVA LIILMQVTIIVLLTRPPQVQMDPHGIWTGSSGYSKESIEWVQKRLSLLSEEMQLAEAHME TMRREFAWLRSYLERLQRTRGST

Transcript Sequence

Transcript ID	Zm00001d021524_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:155139095:155151352:1 gene:Zm00001d021524 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein VASCULAR ASSOCIATED DEATH 1 chloroplastic
Sequence	ACCTACCCTTCTCTATCAATCTTCCATTGTCCACCACCCTCACGCCTCGCCCTCCCGTCC CGGCGACGGCGAGGCCCCCTCCGCCTCCGACTCCCGCGCGACTGCCCCGGACCCCAGTCT CGCCCTTGTCCACCGTCATGGCCGCACCCGCGGTTGCCTCCCCGAGCCGGGCGACCCCCA CCGACATCCCCACCGCCGCGCCCTCTCCCGCCTCCCCGCCGCGCCGCCTTGCGTCGGCGC CGCCCGCCGTCGACGCGTCCGGGTCCTCCTCCCCGGCCTCCGCCCATTCGGGGGACCAGC TCTCCGCCCCCGACGCCTCGAGCCCGCTGCTCGCGAGCAGGAGCGAGGAGTACAGGCTTC TGTTCCGGCTGCCGCCCGACGAGGTTCTCGTGCAAGATTTTAACTGCGCTGTCCAAGAAA ATATTCTTCTTCAGGGACATATGTATTTATTTCTTCACCATATATGTTTCTACTCTAACA TATTTGGATATGAGACAAAGAAAACAATACCTTTGCAAGAGGTAACTGATGTTCGTAAAG CAAAGACAGCTGCCATTTTTCATAATGCCATTGAAATTGTTGCTGGTAGTAGAAGGCATT TTTTTGGATCTTTCTTGTCACGTGATGAAGCCTATCGAATTATAGTAGATGGCTGGGAAC AACATGTTAGTGATGCAAGATTGCTCCTTGAACGTCAGGAGACAAAGTCAGCTAGTAGCA GTGAAGAAAATGGTTATGTTGTATTGGAAGGAACAAAGGAATCTAAACAAGATGGAGATT TATCACTGCCGGACAGGTCTGTCAACAGTACAGCTGTCTCAAGTAGCAATGCTGATGGTG GTGATTCGAACATCAACATTTCCAAAAGGTTTTCAGAAGTTGAGGAGAACGGACTTGAAG ACAACATCGTCGCGCTAAACCCATTCAATTTGGAGCCAGTTGATGCTCCTCCTAGTGTAC CTGAATCTTACACTATGATCTCGGAGTCGAAGTTTCAGGTGCCTGTGGAGGTTCTCTTTA ATTTCTTGTTGTCTGATGGTGCTTTTGGCTTTGTGGATGATTTCCACACAAAATGTGGTG ACAAAGAATTTAGTTGCTCCAAATGGCGTACAGATGAGCAAGGGGGACTTGTAAGGGATG TCTCATTTTTGCATCCAATAAAAATTTATCTTGGTGCAAAATTTGGGACTTGTCAAGAGG TTCAGAAACTTCGTCTTTACAAAAACAGGCGTCTAGTCATTCAAACCTCTCAATCAATAG GTGATGCCCCATATGGGGACCATTTTACTGTAGAGGGCATCTGGGATGTTGAACAAGATA GCCTAGATGAGAACTGTTGTGACCTCAGGATATACATCAATGTAGCCTTCTCAAAGAAAA CAATATTTAGAGGGAAAATAGAGCAGTCAACAAAAGATGAATGCCGGGAAGTTTTCAGTC TCTGGATTAAGCTCGGTCATGATCTTTTGAAGCAGGAGTATGATCGATCAAAAGGCGCCT CCAGCACACCTGATTCTGGTGTTCAACCAGGGGCTACAACAAACGAGGAAAGTGCCGTGG AAGTAGCAGTTCCAGTGGTGAGTTCCTCACATGATGAATCTGGTGCGAGAAGCCTCATTC CTCCTACTCAAGATCACCAGCAGAGGACAGGAAGAGATCCTTCCATCACGTCCACTTCAC AAGAATTGTGGGGTTCTCTATCGTCATACATGAGGTCAAGGCAACTTGGTCCAGTACTAG CAATGTCACTGGTAGCTCTCATTATCCTAATGCAGGTGACCATCATAGTTCTACTAACAA GACCCCCCCAGGTCCAAATGGATCCTCATGGGATCTGGACGGGCAGTTCAGGGTACAGCA AAGAAAGCATAGAGTGGGTGCAGAAGCGCCTCAGCTTACTAAGCGAGGAGATGCAGCTCG CGGAGGCACACATGGAGACGATGAGGCGCGAGTTTGCCTGGCTCAGGTCTTACCTGGAGA GACTGCAGAGGACGCGGGGCAGCACATGACGGCGGCGCGTGTACATGGCACAGGGGCACG AGTTCGCTACGCGAATTCGGAGGTGTATACAAATACAATACAATACAACCCGGAGGTGGT GTTCAGTGTTTCTTCTGTTGTTACAGATGGTACAGATGCAAACAGAGAGAGGTGGATTGT TGTTTGCAGAGGTATTTGCCGTAAGGCAGAACTGCAAGATCCCGGTATAGCGTTCGATGT AAATAGCTGGAGCTTCCCCATTGCGCTGGGGTGATGTACAATGTCAGGGACGAGTCACTG CGATCACGCTACGGCGGTGACGCGTTATGTTATTTATAAATTTCTGACTGAATTTTAACT TCTAAAAGCTACCCGGTCCGTCCGCGGTCCGTCCAAAAATGATAAACAGTACTACCTCCG TTTC