Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021489_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:153857228:153860601:-1 gene:Zm00001d021489 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 2
Sequence

ATGAGCGATGGTTCAGGGTTCCCGGGCTTCCACAGCCACAGCTATGACCGAAGCTATTCG
CGCCCGTTGTTCCAGGTTGCCTCCTTCTCCGACAGTGGAGACGAGCAGGAGAATCATGTG
TCGTCACCACAGATGTGCAGCCATAGCACGAGCCGCACAATGCCGGCAAAACCAGTAGCG
CCGTCATGCCTCTCACCGTCGGTGAGCAGGCTGAGCATGAAGAAAACACAGCAAGTTATT
ATTGTTGAGAAGTCAATGGAGGAGGAAGAGATGGAGCTGATGAAGGAGAAGTACACGAAG
TTGCTGCTTGGGGAGGACATGTCGGGGAGCGGCAAAGGTGTCTGCACTGCTGTGGCCATA
TCCAATTCCATCACCAACCTATATGCAACAGTGTTTGGGACCTGCCACAGGTTGGAGCCA
CTGTCCCCTGAGAAGAGATCAATGTGGAACAGGGAGATGGATTGCCTCCTCTCCATTTGT
GAATACATTGTTGAATTCTCACCTACTGTCCAGGCCATGCCTGATGGAAGCACACATGAT
GTGATGGCAACCTCACCAAGATCAGATATCCTGATGAACCTTCCTGCACTCGAAAAACTA
GAAACAATGCTCCTCGGTATATTGGATAGCTTTCACAAGCCAGAGTTCTGGTATGCAGAC
CAGAGGAACCAATCCTTCAAAGAAAGCAAGAAATCATTCCAGCGAAGTGAGGATAAATGG
TGGTTACCTGAGCCATGTGTCCCAGACTCTGGGCTGTCTGATTGCATGCACCGTGAACTG
CAGCAGAAAAGAGACCAGGCAAGCCAGATCCACAAGATGGCCATGGAAATCAACAGCAGT
ATTCTCTCTGAAATGCAAGTTCCATTATCATACTTGGAGACACTTCCAAAGAGTGGGAGG
GTGGGTGTAGGAGACACCATCTACCGGTATATGTCTTCAGGCGATCAGTTCTCTCCAGAG
CACCTCCTCAACTTCCTCAGTTTGAGCTCAGAACATGATGCACTTGAGATTGCAGACCGT
GTTGAAGCTGCTATGTACGTGTGGCGAAGAAAAGCAAGTGCAACACATGTGGTGTCCAAA
TGGGAGAATGTTACCGAGCTGAATGCTGATGGAGACAAGAATCTGGTCCTTGCCAGTAGG
GCCAGAAGCTTACTCCTGTGCTTGAAGCAGAGGTTCCCAGGCCTGTCACAGACTACCCTG
GACACAAGCAAGATTCAGTACAACAAGGACATTGGACATGCAATACTGGAGAGCTACTCG
AGGGTGCTGGAAAGTTTGGCTCATAATATAGTCTCATGGATAGATGATATTCTCATTGCC
GATGAAAATGTGAAAAAAGGACACAAAATCAGGATGCAGAAGCAGGTGTTCAGCCAGATT
TCTCCACAACGCTGA

Peptide Sequence

PEP ID

Zm00001d021489_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:153857228:153860601:-1 gene:Zm00001d021489 transcript:Zm00001d021489_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 2
Sequence

MSDGSGFPGFHSHSYDRSYSRPLFQVASFSDSGDEQENHVSSPQMCSHSTSRTMPAKPVA
PSCLSPSVSRLSMKKTQQVIIVEKSMEEEEMELMKEKYTKLLLGEDMSGSGKGVCTAVAI
SNSITNLYATVFGTCHRLEPLSPEKRSMWNREMDCLLSICEYIVEFSPTVQAMPDGSTHD
VMATSPRSDILMNLPALEKLETMLLGILDSFHKPEFWYADQRNQSFKESKKSFQRSEDKW
WLPEPCVPDSGLSDCMHRELQQKRDQASQIHKMAMEINSSILSEMQVPLSYLETLPKSGR
VGVGDTIYRYMSSGDQFSPEHLLNFLSLSSEHDALEIADRVEAAMYVWRRKASATHVVSK
WENVTELNADGDKNLVLASRARSLLLCLKQRFPGLSQTTLDTSKIQYNKDIGHAILESYS
RVLESLAHNIVSWIDDILIADENVKKGHKIRMQKQVFSQISPQR

Transcript Sequence

Transcript ID

Zm00001d021489_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:153857228:153860601:-1 gene:Zm00001d021489 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 2
Sequence

CTGAAATTTCGGTAGGGATGCAACAAAGCCAGTGGTAATTTTACCACCAAGCCTTACCAT
TTTCGTGTACCTCCCTGACTGTTGACGCCATCAGCCATGATCGTGCACGACCACACTCCA
ACCACCAAGGCAATCAAAATGTCCTTAATGTGGGGGCAAACGGCTCACATGCCATATACT
AAACATCCTTGAGACGCCCTATGTCAGCCGCCGGGCTATGCATTGTTGTTGTTCCGTGGA
GTTCACCCACCCAAATCACCAAGGGGGACAACATACAAGCCCTTCTGTTCTTGGCCCTTC
TCATCACCATTCTCGCCCAGTTCATCGCTCCTCCAGGTCGTCTGAACCAGGCTTGGACGA
GCAGCAACATCAAGAACAGCAATGAGCGATGGTTCAGGGTTCCCGGGCTTCCACAGCCAC
AGCTATGACCGAAGCTATTCGCGCCCGTTGTTCCAGGTTGCCTCCTTCTCCGACAGTGGA
GACGAGCAGGAGAATCATGTGTCGTCACCACAGATGTGCAGCCATAGCACGAGCCGCACA
ATGCCGGCAAAACCAGTAGCGCCGTCATGCCTCTCACCGTCGGTGAGCAGGCTGAGCATG
AAGAAAACACAGCAAGTTATTATTGTTGAGAAGTCAATGGAGGAGGAAGAGATGGAGCTG
ATGAAGGAGAAGTACACGAAGTTGCTGCTTGGGGAGGACATGTCGGGGAGCGGCAAAGGT
GTCTGCACTGCTGTGGCCATATCCAATTCCATCACCAACCTATATGCAACAGTGTTTGGG
ACCTGCCACAGGTTGGAGCCACTGTCCCCTGAGAAGAGATCAATGTGGAACAGGGAGATG
GATTGCCTCCTCTCCATTTGTGAATACATTGTTGAATTCTCACCTACTGTCCAGGCCATG
CCTGATGGAAGCACACATGATGTGATGGCAACCTCACCAAGATCAGATATCCTGATGAAC
CTTCCTGCACTCGAAAAACTAGAAACAATGCTCCTCGGTATATTGGATAGCTTTCACAAG
CCAGAGTTCTGGTATGCAGACCAGAGGAACCAATCCTTCAAAGAAAGCAAGAAATCATTC
CAGCGAAGTGAGGATAAATGGTGGTTACCTGAGCCATGTGTCCCAGACTCTGGGCTGTCT
GATTGCATGCACCGTGAACTGCAGCAGAAAAGAGACCAGGCAAGCCAGATCCACAAGATG
GCCATGGAAATCAACAGCAGTATTCTCTCTGAAATGCAAGTTCCATTATCATACTTGGAG
ACACTTCCAAAGAGTGGGAGGGTGGGTGTAGGAGACACCATCTACCGGTATATGTCTTCA
GGCGATCAGTTCTCTCCAGAGCACCTCCTCAACTTCCTCAGTTTGAGCTCAGAACATGAT
GCACTTGAGATTGCAGACCGTGTTGAAGCTGCTATGTACGTGTGGCGAAGAAAAGCAAGT
GCAACACATGTGGTGTCCAAATGGGAGAATGTTACCGAGCTGAATGCTGATGGAGACAAG
AATCTGGTCCTTGCCAGTAGGGCCAGAAGCTTACTCCTGTGCTTGAAGCAGAGGTTCCCA
GGCCTGTCACAGACTACCCTGGACACAAGCAAGATTCAGTACAACAAGGACATTGGACAT
GCAATACTGGAGAGCTACTCGAGGGTGCTGGAAAGTTTGGCTCATAATATAGTCTCATGG
ATAGATGATATTCTCATTGCCGATGAAAATGTGAAAAAAGGACACAAAATCAGGATGCAG
AAGCAGGTGTTCAGCCAGATTTCTCCACAACGCTGAACACAGAAAACTAACATACAAATA
CATATATATTATGTTGCATAGAATTTCTGTGGTTTGCCTCATTAACTTTTTCTGGAGTGG
TGTATGCTTGCTCATTTGTTTGAGATAGGGCTGTGTGTTAGATATAATGATGTATGTTAC
ATATGTAAATCATAATGGAAATGGATGAGAGAAAGGGTTGCAACCAGAAACTTACAGTTT
GATTCTGTTGCTGTTTCATGGAACATATTCTCCATAATCTATACAATAAGCATTTTACTT
TAACTTTGGAATGGCATACCCTGGGAGAGTTATAATATCAAGAAATGATTCTGTTCTGGT
ATAGACATGGAACACTGGTCTATGTTTTTATGAATCAAAATCAGTTCTTACAATCTCGGT
CCTCCAGATTGCTGTGAACAACAAAATTAGATAATATGTAGCTCCACCATAAGAAAACAT
ATACATCTCCCAATTATGAAAAAGTGTATTTCAAGAATCGGTTGATGCGAAAATCTTACA
ATTGCAGTATCTAAATATTTTCAGAGGTTCAAATAAAATACATTTTCTCCTAGTCGGCTT
GTACACATGCTATTCCTAGCCCTTCCAGTGTTCCTCTTGATTTGTGCAACTTGTCTTCTC
AAATTCTAAGTGTACCAACATTAAATCCTAATTCCATCATCTCTCAGAAATAAAAACCTC
CCATCTCAGATGTTCTAGGAATGGCACCCTTGTCTTCTTTGAAAATTCACATTCCATTTC
TTGACAAATCAATCTCTAAATATACTTCCTGGTGACAGGGCAATTTTACATCCCAAAAAC
AAAGCAATTTGAATAACATGGTACGTATAATGCATTGTTTTCCGCTGCAACTGGCTGCCT
GAAAGGATTTACCTGGATCTGGAA