Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021467_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:7:152926459:152935542:1 gene:Zm00001d021467 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGCAGGAGCACCGTCACCGTCTTCTCGACGCGGGCCTCCGCCGCTGGCAGGTCGGC
GAGATCGCCGCCCGCATCGCCCACCTCTACTACGCCCAGTACCAGCGCACCGCCGACACC
GCGCTTCTCTCCGAGGCGTTCGTCTTCTACCACGCCGTCCTCGACCGCGCCTACTTCCAG
GATGCCGAATACAAGGAGTGGAAGCATGTCGTGCAAGAGATCGCGAGGTTCCTGCGAGCT
GACTCACCATTTATGAACATGAGGCCGCTCAGGTACAGCTATGCATTCGATCCGCCCCCG
GACACGCTTCGTACTGTGCCAACTACTGTCAAGAAGCGAGGTCTCGTCTTAAGTGACACC
ATACTTTGCAGCTACTATCCTAACGAGGTCAAATTTACAGACCTCTCCATAGATGTATTC
AGAATGGTTCAGTGCCTCGAATGGGAACCATGTGGTTCATTTGCGCTAAACGATGGTTAC
AGCGCCCATGATGAAAGTGGACAAAATCAACCCAATCTATTGAAAGATTTAAGAGATGCT
GCACTGCCCCCGAATCCACTTAAGACAATTCTCTATCGCCCTTCGGTAACACATTTCCTA
ACGGTCCTTTCCACAAAATGCGAGGAGCTTCCTTCAAATGGTATCATGTTAATATATCTT
TCAGCTACAGGGGAGATGGGAACTTCTGGATTTTGTCCTGATACTGGTGAAAATGTTTTG
AGCAACTTTAATAAGTTTGACATATCCAGTCTTAGTCATACTAGTTCAAAGGAAAACAAA
GAACCTTGTCTATGGTTAGGCTGCCGTGAAACTGAAGGTTCAAATTGCATATACCCTGGT
GATCTAATCCCATTTACAAGAAGACCTCTATTTTTGGTGATTGACAGTAGCACCAGCTAT
GCATTCAAGTCTATTCATGGTACTGAAAGGGGGGAGACTTCTGCCATGCTACTTTCACCA
AGTTCCCGATCTTCCGCTGCGGGATTCAGTGGCGATTCTACTCGGCACAGTGGTAGCCAA
TTTACTATGTTCCTCACATCTCCATTGCAAGCTTTCTGCCTTCTGCTTGGCAACAATGGG
ACAGATATTGACAGGGATGCATATAACAAAGCTGAGGAGTTATTATTATTGTCCCTAAAT
GAATGGGCTGCGACTTTAGTTGCATCATCTTCTGCCGAGCAACTCATTCCCTGTTCAAAC
CAACAAACCATAAGACAGAGTTCCTTCCGACCTGCATGCCTCCTTTGCCTGAGTCTGTTG
ATGCAGAGAGCATGCTCTCCCAAAGCTGTGTGCTGCGAGTCGCATCATTCTTTGGCGCTG
CCAGTCAGTTCTCATTTGCTGAGGTTACCACATGGCCTGATGTTGACTCTGAGGAGGCTG
TTGTCACCAGTTCATCTGGCAGTGCCAACAAAGGTGTGCCTGAGACAGCCAGAGATTCAG
ACATTTCAAACTCATCATCATCTTTTTGATGCGACCATGGCGCTACCTTCGTCCGCTTGT
GTTATTTACTTATCTGCATATGCGGATCCATTTGTAATTACTGGTGCTCCTTTATGCTTG
ATTTACACATCATGCAGAACTGCCTTGCCTTTTTGTTTCCTGGTTACTTACTGA

Peptide Sequence

PEP ID

Zm00001d021467_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:7:152926459:152935542:1 gene:Zm00001d021467 transcript:Zm00001d021467_T006 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQQEHRHRLLDAGLRRWQVGEIAARIAHLYYAQYQRTADTALLSEAFVFYHAVLDRAYFQ
DAEYKEWKHVVQEIARFLRADSPFMNMRPLRYSYAFDPPPDTLRTVPTTVKKRGLVLSDT
ILCSYYPNEVKFTDLSIDVFRMVQCLEWEPCGSFALNDGYSAHDESGQNQPNLLKDLRDA
ALPPNPLKTILYRPSVTHFLTVLSTKCEELPSNGIMLIYLSATGEMGTSGFCPDTGENVL
SNFNKFDISSLSHTSSKENKEPCLWLGCRETEGSNCIYPGDLIPFTRRPLFLVIDSSTSY
AFKSIHGTERGETSAMLLSPSSRSSAAGFSGDSTRHSGSQFTMFLTSPLQAFCLLLGNNG
TDIDRDAYNKAEELLLLSLNEWAATLVASSSAEQLIPCSNQQTIRQSSFRPACLLCLSLL
MQRACSPKAVCCESHHSLALPVSSHLLRLPHGLMLTLRRLLSPVHLAVPTKVCLRQPEIQ
TFQTHHHLFDATMALPSSACVIYLSAYADPFVITGAPLCLIYTSCRTALPFCFLVTY

Transcript Sequence

Transcript ID

Zm00001d021467_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:152926459:152935542:1 gene:Zm00001d021467 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAGCCCGACGAGTTCGCCAAGGCCTTCCGCGCCTACACCCAGCTCTGGCGGATGCAGCA
GGAGCACCGTCACCGTCTTCTCGACGCGGGCCTCCGCCGCTGGCAGGTCGGCGAGATCGC
CGCCCGCATCGCCCACCTCTACTACGCCCAGTACCAGCGCACCGCCGACACCGCGCTTCT
CTCCGAGGCGTTCGTCTTCTACCACGCCGTCCTCGACCGCGCCTACTTCCAGGATGCCGA
ATACAAGGAGTGGAAGCATGTCGTGCAAGAGATCGCGAGGTTCCTGCGAGCTGACTCACC
ATTTATGAACATGAGGCCGCTCAGGTACAGCTATGCATTCGATCCGCCCCCGGACACGCT
TCGTACTGTGCCAACTACTGTCAAGAAGCGAGGTCTCGTCTTAAGTGACACCATACTTTG
CAGCTACTATCCTAACGAGGTCAAATTTACAGACCTCTCCATAGATGTATTCAGAATGGT
TCAGTGCCTCGAATGGGAACCATGTGGTTCATTTGCGCTAAACGATGGTTACAGCGCCCA
TGATGAAAGTGGACAAAATCAACCCAATCTATTGAAAGATTTAAGAGATGCTGCACTGCC
CCCGAATCCACTTAAGACAATTCTCTATCGCCCTTCGGTAACACATTTCCTAACGGTCCT
TTCCACAAAATGCGAGGAGCTTCCTTCAAATGGTATCATGTTAATATATCTTTCAGCTAC
AGGGGAGATGGGAACTTCTGGATTTTGTCCTGATACTGGTGAAAATGTTTTGAGCAACTT
TAATAAGTTTGACATATCCAGTCTTAGTCATACTAGTTCAAAGGAAAACAAAGAACCTTG
TCTATGGTTAGGCTGCCGTGAAACTGAAGGTTCAAATTGCATATACCCTGGTGATCTAAT
CCCATTTACAAGAAGACCTCTATTTTTGGTGATTGACAGTAGCACCAGCTATGCATTCAA
GTCTATTCATGGTACTGAAAGGGGGGAGACTTCTGCCATGCTACTTTCACCAAGTTCCCG
ATCTTCCGCTGCGGGATTCAGTGGCGATTCTACTCGGCACAGTGGTAGCCAATTTACTAT
GTTCCTCACATCTCCATTGCAAGCTTTCTGCCTTCTGCTTGGCAACAATGGGACAGATAT
TGACAGGGATGCATATAACAAAGCTGAGGAGTTATTATTATTGTCCCTAAATGAATGGGC
TGCGACTTTAGTTGCATCATCTTCTGCCGAGCAACTCATTCCCTGTTCAAACCAACAAAC
CATAAGACAGAGTTCCTTCCGACCTGCATGCCTCCTTTGCCTGAGTCTGTTGATGCAGAG
AGCATGCTCTCCCAAAGCTGTGTGCTGCGAGTCGCATCATTCTTTGGCGCTGCCAGTCAG
TTCTCATTTGCTGAGGTTACCACATGGCCTGATGTTGACTCTGAGGAGGCTGTTGTCACC
AGTTCATCTGGCAGTGCCAACAAAGGTGTGCCTGAGACAGCCAGAGATTCAGACATTTCA
AACTCATCATCATCTTTTTGATGCGACCATGGCGCTACCTTCGTCCGCTTGTGTTATTTA
CTTATCTGCATATGCGGATCCATTTGTAATTACTGGTGCTCCTTTATGCTTGATTTACAC
ATCATGCAGAACTGCCTTGCCTTTTTGTTTCCTGGTTACTTACTGAATTAATAGTCACTA
GAACATTTTTT