Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021464_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:7:152793072:152796618:1 gene:Zm00001d021464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 1
Sequence

ATGGCGACCGCGTCGGAGGACGAGGCCGCCTCGGACCGCTGCAGCGGCAGCTACAGCCCC
AGCGCCGATGTCAGCGAGTCCGAGACCTCCAGCGACTGCTCCGCGCCCACCACCCGCCGC
TTCGCCTCCTCTTCCTCCGCCTCCGCCTCCGCCTCCGCCACCGTCTCCCGCCGCCTCGCG
TCCTCCTCCTCGTCGCTGCCCACCCCGGCATCGGCCGCCGCCTTCTACCTCTCCAAGCCA
CCCTCCTCCGACCTCTCCGAGATCGACATGATGAAGGAGCGCTTCGCCAAACTCCTGCTC
GGCGAGGACATGTCCGGCAGCGGCAAGGGCGTCTGCACCGCGCTCGCCATCTCCAACGCC
ATCACCAACCTCTCCGCCACCGTGTTCGGCGAGCTGTGGAGGCTGGAGCCGCTCGCGAAG
GCGAGGAAGGCGATGTGGACGCGGGAGATGGAGTGGTTGCTCTCCGTCTCCGACTCCATC
GTCGAGCTCACCCCCTCCATCCAGGAGCTCCCCGAAGGCGGCGGCCAGTTCGAGGTCATG
GTCCCGCGCCCGCGCACCGACCTCTACATGAACCTCCCCGCGCTCAAGAAACTCGACGCC
ATGCTCCTCGCCATGATTGACGGGTTCAAGGGGACGGAGTTCTGGTACGTGGACAGGGGG
GTTATGGTCGAAGACAGCGGGGGGCCATTCCCGTCCTCCTCCTCGTCATCGTCTTGTGGC
CGGCCGTCGGTGCGGCAGGAGGAGAAGTGGTGGTTGCCCTGCCCACGAGTGCCACCCAAG
GGGCTGTCCGAGGATTCGAGGAGGAAGCTGCAGCAAAGCAGGGATTGTGCAAACCAGATA
CTGAAAGCAGCCATGGCGATTAACAGCGATGTGCTCGCAGAGATGGAAATCCCCGAAATG
TACCTGGAGACACTGCCCAAGAGTGGTAAATCTTGCTTGGGTGAGATAATTTACCGATAC
ATAACAGCTGAGCAGTTCTCACCAGAATGTCTACTGGATTGCTTGGATCTATCATCGGAA
CACCACACACTCGAAGTGGCAAACAGAATAGAAGCTGCCATCCATGTTTGGAAACTGAAA
GGCCAAAAAAATTCGACACCTCAAGCCAGATCAAAGAAATCTTGGGGTGGAAAAGTGAAG
GGTCTTGTCGGAGATAAGGAAAAGAGCCACACTTTGTCTGAAAGAGCTAATGGTCTATTG
CAGAGCCTAAGATTGAGATATCCTGGTCTGCCACAAACCTCCCTTGACATGAACAAGATC
CAGTATAACAAGGATGTTGGGCAGTCCATACTTGAAAGTTACTCAAGGGTTCTGGAGAGC
TTGGCATTTAACATAATTGCAAGAATTGATGATGTGATATATGTTGATGATGCTACAAAG
AAATCTGCTGCTGCCGAGTCTGTTTCGATCTTCAATCGTGGCACCGGTGTGCCAATTCAG
AAGAGGATCTCTCTAAGCCCATTCTCTATTCAGAATACGCCATATGCCTCTCCATTCGCA
ACACCCACTTTCTGCTCCTCCACCCCAGTTACATGCAGCCCTGGAAGAGTACAGCCCCCG
TTAAACAAAACCAATCTAGGAAGGCCAGAAATCAAGGTCGAGAAGCTTTTTTCTGGTGAT
CTAGAGAAGGTCTGGACATATGCTGGAAACCTGAGCGCTAGGAAAGACGCTGGCGATGCT
CCCGAGAGAGACTGA

Peptide Sequence

PEP ID

Zm00001d021464_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:7:152793072:152796618:1 gene:Zm00001d021464 transcript:Zm00001d021464_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 1
Sequence

MATASEDEAASDRCSGSYSPSADVSESETSSDCSAPTTRRFASSSSASASASATVSRRLA
SSSSSLPTPASAAAFYLSKPPSSDLSEIDMMKERFAKLLLGEDMSGSGKGVCTALAISNA
ITNLSATVFGELWRLEPLAKARKAMWTREMEWLLSVSDSIVELTPSIQELPEGGGQFEVM
VPRPRTDLYMNLPALKKLDAMLLAMIDGFKGTEFWYVDRGVMVEDSGGPFPSSSSSSSCG
RPSVRQEEKWWLPCPRVPPKGLSEDSRRKLQQSRDCANQILKAAMAINSDVLAEMEIPEM
YLETLPKSGKSCLGEIIYRYITAEQFSPECLLDCLDLSSEHHTLEVANRIEAAIHVWKLK
GQKNSTPQARSKKSWGGKVKGLVGDKEKSHTLSERANGLLQSLRLRYPGLPQTSLDMNKI
QYNKDVGQSILESYSRVLESLAFNIIARIDDVIYVDDATKKSAAAESVSIFNRGTGVPIQ
KRISLSPFSIQNTPYASPFATPTFCSSTPVTCSPGRVQPPLNKTNLGRPEIKVEKLFSGD
LEKVWTYAGNLSARKDAGDAPERD

Transcript Sequence

Transcript ID

Zm00001d021464_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:152793072:152796618:1 gene:Zm00001d021464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 1
Sequence

GTGAGCTCGCCCTCCTGCTCCTGCTCCTGCTCCCGCAGCTGCGCTGTGCTGCCATCGCTT
TCCCCTCCTCCCAGTCCCACCCCCAGATTCGCATGCGCGCTTCCCTCTCCACCGCCACAG
GCACAGCGTCAGCGCCTAGCTTAGCCAGCTCGCCGCCGCAATGGCGACCGCGTCGGAGGA
CGAGGCCGCCTCGGACCGCTGCAGCGGCAGCTACAGCCCCAGCGCCGATGTCAGCGAGTC
CGAGACCTCCAGCGACTGCTCCGCGCCCACCACCCGCCGCTTCGCCTCCTCTTCCTCCGC
CTCCGCCTCCGCCTCCGCCACCGTCTCCCGCCGCCTCGCGTCCTCCTCCTCGTCGCTGCC
CACCCCGGCATCGGCCGCCGCCTTCTACCTCTCCAAGCCACCCTCCTCCGACCTCTCCGA
GATCGACATGATGAAGGAGCGCTTCGCCAAACTCCTGCTCGGCGAGGACATGTCCGGCAG
CGGCAAGGGCGTCTGCACCGCGCTCGCCATCTCCAACGCCATCACCAACCTCTCCGCCAC
CGTGTTCGGCGAGCTGTGGAGGCTGGAGCCGCTCGCGAAGGCGAGGAAGGCGATGTGGAC
GCGGGAGATGGAGTGGTTGCTCTCCGTCTCCGACTCCATCGTCGAGCTCACCCCCTCCAT
CCAGGAGCTCCCCGAAGGCGGCGGCCAGTTCGAGGTCATGGTCCCGCGCCCGCGCACCGA
CCTCTACATGAACCTCCCCGCGCTCAAGAAACTCGACGCCATGCTCCTCGCCATGATTGA
CGGGTTCAAGGGGACGGAGTTCTGGTACGTGGACAGGGGGGTTATGGTCGAAGACAGCGG
GGGGCCATTCCCGTCCTCCTCCTCGTCATCGTCTTGTGGCCGGCCGTCGGTGCGGCAGGA
GGAGAAGTGGTGGTTGCCCTGCCCACGAGTGCCACCCAAGGGGCTGTCCGAGGATTCGAG
GAGGAAGCTGCAGCAAAGCAGGGATTGTGCAAACCAGATACTGAAAGCAGCCATGGCGAT
TAACAGCGATGTGCTCGCAGAGATGGAAATCCCCGAAATGTACCTGGAGACACTGCCCAA
GAGTGGTAAATCTTGCTTGGGTGAGATAATTTACCGATACATAACAGCTGAGCAGTTCTC
ACCAGAATGTCTACTGGATTGCTTGGATCTATCATCGGAACACCACACACTCGAAGTGGC
AAACAGAATAGAAGCTGCCATCCATGTTTGGAAACTGAAAGGCCAAAAAAATTCGACACC
TCAAGCCAGATCAAAGAAATCTTGGGGTGGAAAAGTGAAGGGTCTTGTCGGAGATAAGGA
AAAGAGCCACACTTTGTCTGAAAGAGCTAATGGTCTATTGCAGAGCCTAAGATTGAGATA
TCCTGGTCTGCCACAAACCTCCCTTGACATGAACAAGATCCAGTATAACAAGGATGTTGG
GCAGTCCATACTTGAAAGTTACTCAAGGGTTCTGGAGAGCTTGGCATTTAACATAATTGC
AAGAATTGATGATGTGATATATGTTGATGATGCTACAAAGAAATCTGCTGCTGCCGAGTC
TGTTTCGATCTTCAATCGTGGCACCGGTGTGCCAATTCAGAAGAGGATCTCTCTAAGCCC
ATTCTCTATTCAGAATACGCCATATGCCTCTCCATTCGCAACACCCACTTTCTGCTCCTC
CACCCCAGTTACATGCAGCCCTGGAAGAGTACAGCCCCCGTTAAACAAAACCAATCTAGG
AAGGCCAGAAATCAAGGTCGAGAAGCTTTTTTCTGGTGATCTAGAGAAGGTCTGGACATA
TGCTGGAAACCTGAGCGCTAGGAAAGACGCTGGCGATGCTCCCGAGAGAGACTGATGGGC
GATGGAGGAAGGTAGACTTGT