Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021430_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:7:151969077:151991984:1 gene:Zm00001d021430 gene_biotype:protein_coding transcript_biotype:protein_coding description:RAD3-like DNA-binding helicase protein
Sequence

ATGTTTGGTTGGCCGCTGCCCACGCCCACGCGCGCCACAGATTTTGCGCCAAAACGAGCG
CCGCGGGTTTTTGCAGCTGTGCTATCATCTGGTCCAACAAGGCAGATATTGAATGCTAGC
TATAAAACTGCGGACAATTCATCTTTCCAGGATGAACTTGGAGCTTCACTAGAGGAAATA
TGCAGAATTGTGCCTGGTGGTGCTCTAGTGTTTTTTCCTAGCTACAAGTTGATGGACAAA
TTGCAAGTGCGCTGGTCTCAGACAGGTCAATGGGCACGGCTTAATGCTCAAAAACATGTG
TTTGTTGAGCCTAAGGGAAGTAGTGAGGAACTGGATCCTGTTTTAAAAGGGTACTATGAC
GCAATCCTTGGTAAAGCTCCTGTCAAGAAAGGCAGAGGTGGTTCAAAACAAATAGCGAAG
AATCGAGTGACAAAAAAATCATCACAGGAATCAGTGAAAGCAGGAGCTGCTCTTCTTGCA
GTTTGCCGTGGGAAGGTATCTGAAGGGATTGACTTCGCTGATGACAATGCTAGAGTTGTG
GTTATTGTTGGAATTCCTTTTCCAAATATAAACGATGTTCAAGTAAAGCTGAAAAGGAGA
TATAATGATTCATACAAATCATCAAAACATCTGTTAAGTGGGAGTGAATGGTACTGTCAT
CAGGCATTTCGTGCTTTAAACCAAGCTGCAGGTCGTTGCATTCGTCATAAATCTGATTAC
GGAGGCATAATTCTGATTGATGAGCGATATCAGGATGACAGAAATGTTCTCTACATTTCC
AAATGGCTTAGGAATGCAATCAAGAAGTATGATAGCTTCCAGGAGACAATGGCTAAGTTG
CAAAAGTTCTTTCAGAATGCTCAGGAAAAAATAAAAATTAAAGATTGTGGCATCTTCCCC
AAGGTTAAGTTGGATAATGAAGCACCTCAATCTTTCAGTGATGATAAAAGAAAGTTGCCG
TGGCCAGAATTGAGTTCCTCAAACCACTCAGTATCACGATGTAATCAGAAGGTAAAGACT
GAATGTCTTAGTCAGAGGATTCCAGACATTGATGGTGTGGCGGTAAACCAAAAAGTTGTG
GGTATGTGTTATACATCGCCAGAAGTATCGAAGATCTCTGTTCTAGTAAAGAAAGAAAAC
TCTTCATCACCTGAAAGTTTTTCAACGGTCTGTCCACTGCATCCGTGCAAAATTCGATCT
GATTCCGAAGGTGTAGCCAATACTGGAGCAAATTATGGAGTCAAAACAGAAATTATAAAA
TTGGAGGAGGATGATTTTAAACCTAGGTATGCAGAGATCACTATCTTAAATCCATTAGAA
GACAGGTCACGGCAACCTACTCTTGTTGAGGGAACTTCTGCAGCGACTCCAGTAGCTAGT
CCAAGCAACTATGCTGAGGTAAACACCTCAGTAAATATCAACAATGGAGATCAGATTGCA
GACATGTCCATTTCTCCTTTTTCAACAAACAGAAATCTTTCTTCCCTGTCCACACTGGCA
GCTACTCCTGAAAGGACCACAGACAAAGACTGTCATGATTCTTTTATTAACAGAAGTGTA
AATTCTCACTATGAGAAAAAGAGAAGGTTGAGCTCCCCAATGAGTTGTACTTACACGACG
CAGTCTAGTCCTCCAAGCAAATCATTCTGCCACACTGGTTCTGTTATGCCTGGGGATTTG
AATAGAAATTCTGAATTGTGTTGTAAAAATATAGGATTGTCCAGGTGTGAAAATGTCAAG
TTTGAAAGAAACTACAGTCCAGAAGAGGTTTCAGCAAAGAAGTCTATGCAAAAGAAACTT
CTTATAAATTGCATTAGATGCAAAACAGCTCTTGGGTTAGAAGAAGATGGGTTTCTTGTT
ACTTGTACACAATATTATTCATCAAAATTGTACTTGGCATATCTTTTGAAACATGGGCTA
TCAACTTTTGGCATCCTGGAGGATGATTTTTCAGCATCGACACCAACAGAGGTACACGTA
GTGCAGTGTGAAGCTTCGTCACTCAACAAAAATGTATTTGGCAAATTCAGCAGCCAGGGT
CATGTTTGGTTTGCAAAGGATGGATGTGTATACAACGCAATGACCTGTTCTTTGTGCTCT
TCTGAAAACACAAGTGCCATGGTCCTCGGTGTGCAAGTTCTTGCAACTGATAGGTCAAAT
CAACAATTGGTGGAAAAGGTGCTCTTGTTCAGTGATCGTTTGGATGTCCAGTCTGAGCCA
TCAAAGGGACAGATTTCAAGAACTCGAAGAGATGCTAGTAACATCTGCCAGCAATCTGTG
ATCGACCTTGATTCTTTTGCATATAAACCATTAAAGAAAGATCCTGTGGCGCTGAACTCA
AGAAGGTCTAAGCTTAGGTTACCTGCCCCGAACAAATCCACCACTGGTACATAA

Peptide Sequence

PEP ID

Zm00001d021430_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:7:151969077:151991984:1 gene:Zm00001d021430 transcript:Zm00001d021430_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:RAD3-like DNA-binding helicase protein
Sequence

MFGWPLPTPTRATDFAPKRAPRVFAAVLSSGPTRQILNASYKTADNSSFQDELGASLEEI
CRIVPGGALVFFPSYKLMDKLQVRWSQTGQWARLNAQKHVFVEPKGSSEELDPVLKGYYD
AILGKAPVKKGRGGSKQIAKNRVTKKSSQESVKAGAALLAVCRGKVSEGIDFADDNARVV
VIVGIPFPNINDVQVKLKRRYNDSYKSSKHLLSGSEWYCHQAFRALNQAAGRCIRHKSDY
GGIILIDERYQDDRNVLYISKWLRNAIKKYDSFQETMAKLQKFFQNAQEKIKIKDCGIFP
KVKLDNEAPQSFSDDKRKLPWPELSSSNHSVSRCNQKVKTECLSQRIPDIDGVAVNQKVV
GMCYTSPEVSKISVLVKKENSSSPESFSTVCPLHPCKIRSDSEGVANTGANYGVKTEIIK
LEEDDFKPRYAEITILNPLEDRSRQPTLVEGTSAATPVASPSNYAEVNTSVNINNGDQIA
DMSISPFSTNRNLSSLSTLAATPERTTDKDCHDSFINRSVNSHYEKKRRLSSPMSCTYTT
QSSPPSKSFCHTGSVMPGDLNRNSELCCKNIGLSRCENVKFERNYSPEEVSAKKSMQKKL
LINCIRCKTALGLEEDGFLVTCTQYYSSKLYLAYLLKHGLSTFGILEDDFSASTPTEVHV
VQCEASSLNKNVFGKFSSQGHVWFAKDGCVYNAMTCSLCSSENTSAMVLGVQVLATDRSN
QQLVEKVLLFSDRLDVQSEPSKGQISRTRRDASNICQQSVIDLDSFAYKPLKKDPVALNS
RRSKLRLPAPNKSTTGT

Transcript Sequence

Transcript ID

Zm00001d021430_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:151969077:151991984:1 gene:Zm00001d021430 gene_biotype:protein_coding transcript_biotype:protein_coding description:RAD3-like DNA-binding helicase protein
Sequence

CGCTCCGTTCCCCTCCCGCCCCCGATCCATTGCTCCACGGCGGAGGATTCGTCCCAGATG
ATACGCAGCCGCAGCCGACGCCAGTCGTCCCGGAGAAGGCTGTCAAGAAGAAGAACGCCC
CGATAATCTATTACGCGACGAGGACGCACGCGCAGATAAGCCAGGTTGTCCGGGAGTACC
GCAAGACGTCGTACCGAGTGCGCATGGCCATCTTGGCCTCAAGGAAGCACTACTGTGTCA
ATAAATTTGCTTGCGCGAGCGACAACATTGATGAGAAATGCAAGTCACTGCTAGACAAGA
CTGTTCAAGGTTGCCCAGAATTCAAGAATGCACAGAAACTAAGTCGGCATCCATCCCTTC
AGATTGGTGGCTGCTATGAAGTTCACGATATTGAGGATCTTGTCAGAGTTGGACAGAAAG
CAAAAGGATGTCCGTATTTTGCTGCACAACACATGGCAGAAGCAGCCCAATTGGTTTTCT
GCCCATATAACTACCTGATTAGTCCGGTTGTCAGGAGAGCAATGGACATCGATATCAGTG
GTTCCATCATTATTCTTGACGAGGCACACAACATAGAAGATATAGCACGTGATGCTGGCA
GTATTGACATCGATGAAGAATCACTTTGCTTGTTGCAGGGAGAACTTCAAAACCTGGCCG
CTAATGAGGCCGTTGCAATGATATACCAACCCTTGCACGATATTATTCAGGCTCTTATTG
GTTGGATTGCTGAGAGGGAGGACAATTTGCATAATCATGAGTTCGGACATCCGGCTTCAT
ATTGGACTGGTGAAAAGGCAATGAATGAACTTCAGCGGGCTGGTATTTCTCCAATGTATT
TCCCGGTATTGCAAGAATGTGCAACAAAGGCAATTAAAGCTGCTTCAGATACTGAATCAG
ATGGTTCACACTTAAGTGGTGGTAGTGCTATGACACTAGAGAGTCTATTCTCTTCGTTGA
GCTACTTTTTTGCTCAGAAAGGACGCAATTCATGTGATTATCAACTTGCTTTGCAGCGTT
TTGTTAAAAAGGAAGGCAAGGACGTAATTTCTTCAACATGCACAATGAGTTTGTGGTGTC
TCAATCCTGCTGTTGTTTTTCAAGAAATTGCAGATCGAACACTTTCGGTAATTCTGACTT
CTGGAACACTTTCACCAATGGGTTCCTTTACATCTGAACTTGGTGTCCAGTTTGAGGCCT
GCATGGAAGCTCCTCATGTAATTAATGCTGATTCTCAGGTTAGGTGGTTTGAGTAGCATT
CCTCAGGTTCTGGGTTCGACTCCCGGTGGGAGCGAATTTCAGGCTATGGTTAAAAAAAAT
CCCCTCGTCTATTCCACGCCAAAGCACAGGTCTAAGGCTCAGCCCCGATCGTGGTCGTTC
TCACATGGGCTTCGATGCTGCTGTGTATGGGTGGGGCAGGGGTTCGGGGGTTTTCTCGAC
CTGTGTGAGAAGGTCTTCTTAATACAATGCTCGGGGGCTATCTTACCCCCCGCAGGTCGA
GTTTTTTATGGTAGTTTGTAGCCTCTCTAAAGACCTGTGAATTGATTCTCATTTTCATCA
GTTTAAAGCTGGTTAATTTGCCCATCATGCTGCCAACATAGAAAATAATTTTCCTAATGA
GCTCTAACACTTAGTTTGTTTAGGACCTGGATATCGAGTTATGGACCTTTTGTGGTTAGC
ATAAATATTAACAAATATAGGGCATGTTTGGTTGGCCGCTGCCCACGCCCACGCGCGCCA
CAGATTTTGCGCCAAAACGAGCGCCGCGGGTTTTTGCAGCTGTGCTATCATCTGGTCCAA
CAAGGCAGATATTGAATGCTAGCTATAAAACTGCGGACAATTCATCTTTCCAGGATGAAC
TTGGAGCTTCACTAGAGGAAATATGCAGAATTGTGCCTGGTGGTGCTCTAGTGTTTTTTC
CTAGCTACAAGTTGATGGACAAATTGCAAGTGCGCTGGTCTCAGACAGGTCAATGGGCAC
GGCTTAATGCTCAAAAACATGTGTTTGTTGAGCCTAAGGGAAGTAGTGAGGAACTGGATC
CTGTTTTAAAAGGGTACTATGACGCAATCCTTGGTAAAGCTCCTGTCAAGAAAGGCAGAG
GTGGTTCAAAACAAATAGCGAAGAATCGAGTGACAAAAAAATCATCACAGGAATCAGTGA
AAGCAGGAGCTGCTCTTCTTGCAGTTTGCCGTGGGAAGGTATCTGAAGGGATTGACTTCG
CTGATGACAATGCTAGAGTTGTGGTTATTGTTGGAATTCCTTTTCCAAATATAAACGATG
TTCAAGTAAAGCTGAAAAGGAGATATAATGATTCATACAAATCATCAAAACATCTGTTAA
GTGGGAGTGAATGGTACTGTCATCAGGCATTTCGTGCTTTAAACCAAGCTGCAGGTCGTT
GCATTCGTCATAAATCTGATTACGGAGGCATAATTCTGATTGATGAGCGATATCAGGATG
ACAGAAATGTTCTCTACATTTCCAAATGGCTTAGGAATGCAATCAAGAAGTATGATAGCT
TCCAGGAGACAATGGCTAAGTTGCAAAAGTTCTTTCAGAATGCTCAGGAAAAAATAAAAA
TTAAAGATTGTGGCATCTTCCCCAAGGTTAAGTTGGATAATGAAGCACCTCAATCTTTCA
GTGATGATAAAAGAAAGTTGCCGTGGCCAGAATTGAGTTCCTCAAACCACTCAGTATCAC
GATGTAATCAGAAGGTAAAGACTGAATGTCTTAGTCAGAGGATTCCAGACATTGATGGTG
TGGCGGTAAACCAAAAAGTTGTGGGTATGTGTTATACATCGCCAGAAGTATCGAAGATCT
CTGTTCTAGTAAAGAAAGAAAACTCTTCATCACCTGAAAGTTTTTCAACGGTCTGTCCAC
TGCATCCGTGCAAAATTCGATCTGATTCCGAAGGTGTAGCCAATACTGGAGCAAATTATG
GAGTCAAAACAGAAATTATAAAATTGGAGGAGGATGATTTTAAACCTAGGTATGCAGAGA
TCACTATCTTAAATCCATTAGAAGACAGGTCACGGCAACCTACTCTTGTTGAGGGAACTT
CTGCAGCGACTCCAGTAGCTAGTCCAAGCAACTATGCTGAGGTAAACACCTCAGTAAATA
TCAACAATGGAGATCAGATTGCAGACATGTCCATTTCTCCTTTTTCAACAAACAGAAATC
TTTCTTCCCTGTCCACACTGGCAGCTACTCCTGAAAGGACCACAGACAAAGACTGTCATG
ATTCTTTTATTAACAGAAGTGTAAATTCTCACTATGAGAAAAAGAGAAGGTTGAGCTCCC
CAATGAGTTGTACTTACACGACGCAGTCTAGTCCTCCAAGCAAATCATTCTGCCACACTG
GTTCTGTTATGCCTGGGGATTTGAATAGAAATTCTGAATTGTGTTGTAAAAATATAGGAT
TGTCCAGGTGTGAAAATGTCAAGTTTGAAAGAAACTACAGTCCAGAAGAGGTTTCAGCAA
AGAAGTCTATGCAAAAGAAACTTCTTATAAATTGCATTAGATGCAAAACAGCTCTTGGGT
TAGAAGAAGATGGGTTTCTTGTTACTTGTACACAATATTATTCATCAAAATTGTACTTGG
CATATCTTTTGAAACATGGGCTATCAACTTTTGGCATCCTGGAGGATGATTTTTCAGCAT
CGACACCAACAGAGGTACACGTAGTGCAGTGTGAAGCTTCGTCACTCAACAAAAATGTAT
TTGGCAAATTCAGCAGCCAGGGTCATGTTTGGTTTGCAAAGGATGGATGTGTATACAACG
CAATGACCTGTTCTTTGTGCTCTTCTGAAAACACAAGTGCCATGGTCCTCGGTGTGCAAG
TTCTTGCAACTGATAGGTCAAATCAACAATTGGTGGAAAAGGTGCTCTTGTTCAGTGATC
GTTTGGATGTCCAGTCTGAGCCATCAAAGGGACAGATTTCAAGAACTCGAAGAGATGCTA
GTAACATCTGCCAGCAATCTGTGATCGACCTTGATTCTTTTGCATATAAACCATTAAAGA
AAGATCCTGTGGCGCTGAACTCAAGAAGGTCTAAGCTTAGGTTACCTGCCCCGAACAAAT
CCACCACTGGTACATAATTTGATGGAGAGTTTGAGACAATGGCGATCTTTGCCGTGAAGC
ATTGGGAAGAACTTTGTTCTGTGAGATATGACATGCGGGGAGATGCAGATGTTACGTCGC
CATGGAGATTTATAGTTTCAAACATCCACATGGATTAGAGAAGTTCCCTGAGCTGAAGTA
GGGTGTAAAATGCATGGCCTGGCAGTAGAAAATTAGGATGCTGATGTCTATATCCATTTA
CATGCGTCCCATTGTCGATTATATCTATGAACAGTTTTTGCGTTC