Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021378_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:7:150323678:150329166:1 gene:Zm00001d021378 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

ATGAAGTCCAGCGCGGTTACTACAAAGGGCAAGGCTATATTTGAGCTCAAGCACAAGCTG
GTACAAGCTGTTAACAAGATTGCAGACAGAGACACTTACCAGATTGGATTGGATGAGATC
GAGAAGATGGCGGATACCCTGGCCCCTGACATGATTGGCCCCTTCTTGTCATGTGTCATT
GACACTGATGCTGAGCAGAAGAGTGCAGTGCGGAAGGAGTGCATCAAGGTGATTGGCACA
CTGGCACGACTACATGGAAACCTATTGGCACCTCACATGGCGAAAATGGTGTCCAGTGTA
GTTAAGCGCCTGAAGGACACCGATTCAGTTGTTAGAGATGCATGTGTTGACACTTGTGGT
ACCCTTGCAATGTGCGCCAGAAGTTATGGGGATGGTGGTGCAGCGTTGGTGACATTGGTG
CGCCCCTTGTTTGAATCACTGGGTGAACAGAATAGGTATATTCAGGCTGGGGCAGCACTG
TGCCTGGCCAAGGTTATAGATGAGAGCAATTACTTCCCTGGGCCTGTGCTCCCGCAGATG
CTTGTTCGTGTTGTTAAGCTGCTCAAGAACCCCCACTTCATGGCGAAGCCCGCTGCGATT
GACTTGATAAGAAGCATTATTCAGGCTGAAGGTGCTTCCACAGAGCAGGCATTATCATCA
GCTCTAACAAGTATTATGGATGCGCTGAAGAGTACTGACTGGAATACAAGGAAGGCTGCC
TCACTAGCTCTTTCAAGTATTGCGGTCAGTTCTGGGTATTTGGTTACCTCTTTCAGAACT
TCCTGCCTTCGCTCCCTTGAGCGTAGTAAATTTGACAAGGTAAAACCGGTACGTGACACC
ATTATACATGCAATTCAGCTGTGGAAAGCTATTCCAGGGTCTCATACTCCTGAACCATCA
GAAGCTGGGTCATCAACAAAAGAGAACTACTTTGGAGACCATCATGACGCCAGAAGTATA
CATGATGGAGGATCAAGAGATACTTCTTTTAGGAGAACAGATCATGGGCCTTCTGTATCT
GTTATCAGTGGTAGTTCTCTCAGTTCAGCAAAGCGGAGGTCTCCTTTATCTATTAACAAA
GTAGCCATAAACAATGCTGCAAATTTGCAACGGATGAAGACTGGTGATTGGCGTGTTGAG
GTGTCAGTTCCAAAGCAGAGTATGATACCGCTGGTTAATAATGACGAGAAGGGATCCAGT
AAAGCCTGCAGCCTAAAAGATACAAAGAGAAATGCATATGAAAGTGTTGATGTAGACAGT
AAGTTTGACTATGACATTGTAGATGATAAACAAGAATGCTCCTCTGTGTCAGAAGTAGCC
AGCAGGAGTTTTGAGACAAAGCATGTCACTACTGCTCAGGAATGCACTGAAGATTGTGAT
TCAGCAGAAGTTACAGAACAATGTCCCAGGGGTCGAGAAAGTAAGAGCATAGGCTCAACA
ATTACAGATGTTACTACTCATGACACACATAGTTGTTGTCTGAATACTATGAATGAATTG
GCCCTTGTTAGGAAGCAACTTCAAGAGATGGAGAGGAAGCAAGCAAATTTTTTTGATTTG
TTGCAGGAATTTATGGCCAGCTCAGCAGAGAACATGTCAGTGCTAAATTTGAAGGTGCAC
AACTTGGAGAATGCTGCAGACAAAACTGTATATACAATTACTCAGAGCGAAAGCCGGTAT
CATCTTCCTGGCTCCAAGCATTTTAAGAACCAAAGCGTCTCTTCTTTGCCTAGGCTTTCG
ACTTCTACACCTAGATCATCTATGGATGTTAACTACAAGCCACCACCAATCTCAGAGTTG
AAACATGAGAAGTGGATGCGTGATCTACCATCTCGGGGCTCAAACATGTGTTGTAAAGAG
GGAGCTGATTTTCGAAAGGATCATGTTCGCAGTAAAGTTAGGAAGCTTGGGCCTGTGAGC
TTAGAGGGTAACTTGGGAAGATGTGATCCAAGCTCAGCAAGAAGTCGAACATCAGGGGTT
AAAGGGACTTATCCAGTTTCATTTACCAGTTCCTGTGAACAATCTGGACTGCGAAATGCA
TTGTGCACCTCAAATCAACCTGGTGAGTTTCAAGATACTGATGGCATGGAACCTGCATAC
ATGGAAGCCCTGAACTGTGGTGATTATGATGATCTGATTGACCTAATGGATAGAACTGGA
CCAGTTCTCGAAAAGTTGTCGTGTGAGACGACAAATGAGCTTTTGAGGGTTATAGCTGAA
CAATTTCTTAATAAGAAGTTCTTTGACTTGGCACTGCCTTGGCTTCAACAGTTAGCAGAT
TTAAGCACGATTTATAAGCCAACTCAACTTTTTGCATCTGTGAGAGCACAAAAGGAGTTC
CTTTCTGCATTGGAGGAAGCTGCAACGGGTGGATCTATGGAACCAGCCTTGAGGATTGCA
ATTGCACAGCTCGGATTTAAACTATCCAAAGCTTTTGAGGTTGGCCCATGCAGGTGGACG
TGCAAAACACTGTTATGTCACTTAGATAGGCCAGACTTTGAAATAGGCGGTGAGGAAAAT
CTCAGCCAGAATGTGCAGAGAAAATGA

Peptide Sequence

PEP ID

Zm00001d021378_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:7:150323678:150329166:1 gene:Zm00001d021378 transcript:Zm00001d021378_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

MKSSAVTTKGKAIFELKHKLVQAVNKIADRDTYQIGLDEIEKMADTLAPDMIGPFLSCVI
DTDAEQKSAVRKECIKVIGTLARLHGNLLAPHMAKMVSSVVKRLKDTDSVVRDACVDTCG
TLAMCARSYGDGGAALVTLVRPLFESLGEQNRYIQAGAALCLAKVIDESNYFPGPVLPQM
LVRVVKLLKNPHFMAKPAAIDLIRSIIQAEGASTEQALSSALTSIMDALKSTDWNTRKAA
SLALSSIAVSSGYLVTSFRTSCLRSLERSKFDKVKPVRDTIIHAIQLWKAIPGSHTPEPS
EAGSSTKENYFGDHHDARSIHDGGSRDTSFRRTDHGPSVSVISGSSLSSAKRRSPLSINK
VAINNAANLQRMKTGDWRVEVSVPKQSMIPLVNNDEKGSSKACSLKDTKRNAYESVDVDS
KFDYDIVDDKQECSSVSEVASRSFETKHVTTAQECTEDCDSAEVTEQCPRGRESKSIGST
ITDVTTHDTHSCCLNTMNELALVRKQLQEMERKQANFFDLLQEFMASSAENMSVLNLKVH
NLENAADKTVYTITQSESRYHLPGSKHFKNQSVSSLPRLSTSTPRSSMDVNYKPPPISEL
KHEKWMRDLPSRGSNMCCKEGADFRKDHVRSKVRKLGPVSLEGNLGRCDPSSARSRTSGV
KGTYPVSFTSSCEQSGLRNALCTSNQPGEFQDTDGMEPAYMEALNCGDYDDLIDLMDRTG
PVLEKLSCETTNELLRVIAEQFLNKKFFDLALPWLQQLADLSTIYKPTQLFASVRAQKEF
LSALEEAATGGSMEPALRIAIAQLGFKLSKAFEVGPCRWTCKTLLCHLDRPDFEIGGEEN
LSQNVQRK

Transcript Sequence

Transcript ID

Zm00001d021378_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:150323678:150329166:1 gene:Zm00001d021378 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

GATGGAACCGGCGATTTCAAAAATTTCCCTCCCACCCAATGATCAGGTAAAGGGATGGGT
GGGCAAGGTACAGGAAACACTGTCTCTGTTCCCCTGCTAGGGAAGGCACTGTCCCTCTCC
TTGTAAGTTTTCCTGTGAGCTCTCTGCTGCTGTTCAAGGAGCTTTATCCGGTGATAGTAT
CAAAGCACCAAGATGAAGTCCAGCGCGGTTACTACAAAGGGCAAGGCTATATTTGAGCTC
AAGCACAAGCTGGTACAAGCTGTTAACAAGATTGCAGACAGAGACACTTACCAGATTGGA
TTGGATGAGATCGAGAAGATGGCGGATACCCTGGCCCCTGACATGATTGGCCCCTTCTTG
TCATGTGTCATTGACACTGATGCTGAGCAGAAGAGTGCAGTGCGGAAGGAGTGCATCAAG
GTGATTGGCACACTGGCACGACTACATGGAAACCTATTGGCACCTCACATGGCGAAAATG
GTGTCCAGTGTAGTTAAGCGCCTGAAGGACACCGATTCAGTTGTTAGAGATGCATGTGTT
GACACTTGTGGTACCCTTGCAATGTGCGCCAGAAGTTATGGGGATGGTGGTGCAGCGTTG
GTGACATTGGTGCGCCCCTTGTTTGAATCACTGGGTGAACAGAATAGGTATATTCAGGCT
GGGGCAGCACTGTGCCTGGCCAAGGTTATAGATGAGAGCAATTACTTCCCTGGGCCTGTG
CTCCCGCAGATGCTTGTTCGTGTTGTTAAGCTGCTCAAGAACCCCCACTTCATGGCGAAG
CCCGCTGCGATTGACTTGATAAGAAGCATTATTCAGGCTGAAGGTGCTTCCACAGAGCAG
GCATTATCATCAGCTCTAACAAGTATTATGGATGCGCTGAAGAGTACTGACTGGAATACA
AGGAAGGCTGCCTCACTAGCTCTTTCAAGTATTGCGGTCAGTTCTGGGTATTTGGTTACC
TCTTTCAGAACTTCCTGCCTTCGCTCCCTTGAGCGTAGTAAATTTGACAAGGTAAAACCG
GTACGTGACACCATTATACATGCAATTCAGCTGTGGAAAGCTATTCCAGGGTCTCATACT
CCTGAACCATCAGAAGCTGGGTCATCAACAAAAGAGAACTACTTTGGAGACCATCATGAC
GCCAGAAGTATACATGATGGAGGATCAAGAGATACTTCTTTTAGGAGAACAGATCATGGG
CCTTCTGTATCTGTTATCAGTGGTAGTTCTCTCAGTTCAGCAAAGCGGAGGTCTCCTTTA
TCTATTAACAAAGTAGCCATAAACAATGCTGCAAATTTGCAACGGATGAAGACTGGTGAT
TGGCGTGTTGAGGTGTCAGTTCCAAAGCAGAGTATGATACCGCTGGTTAATAATGACGAG
AAGGGATCCAGTAAAGCCTGCAGCCTAAAAGATACAAAGAGAAATGCATATGAAAGTGTT
GATGTAGACAGTAAGTTTGACTATGACATTGTAGATGATAAACAAGAATGCTCCTCTGTG
TCAGAAGTAGCCAGCAGGAGTTTTGAGACAAAGCATGTCACTACTGCTCAGGAATGCACT
GAAGATTGTGATTCAGCAGAAGTTACAGAACAATGTCCCAGGGGTCGAGAAAGTAAGAGC
ATAGGCTCAACAATTACAGATGTTACTACTCATGACACACATAGTTGTTGTCTGAATACT
ATGAATGAATTGGCCCTTGTTAGGAAGCAACTTCAAGAGATGGAGAGGAAGCAAGCAAAT
TTTTTTGATTTGTTGCAGGAATTTATGGCCAGCTCAGCAGAGAACATGTCAGTGCTAAAT
TTGAAGGTGCACAACTTGGAGAATGCTGCAGACAAAACTGTATATACAATTACTCAGAGC
GAAAGCCGGTATCATCTTCCTGGCTCCAAGCATTTTAAGAACCAAAGCGTCTCTTCTTTG
CCTAGGCTTTCGACTTCTACACCTAGATCATCTATGGATGTTAACTACAAGCCACCACCA
ATCTCAGAGTTGAAACATGAGAAGTGGATGCGTGATCTACCATCTCGGGGCTCAAACATG
TGTTGTAAAGAGGGAGCTGATTTTCGAAAGGATCATGTTCGCAGTAAAGTTAGGAAGCTT
GGGCCTGTGAGCTTAGAGGGTAACTTGGGAAGATGTGATCCAAGCTCAGCAAGAAGTCGA
ACATCAGGGGTTAAAGGGACTTATCCAGTTTCATTTACCAGTTCCTGTGAACAATCTGGA
CTGCGAAATGCATTGTGCACCTCAAATCAACCTGGTGAGTTTCAAGATACTGATGGCATG
GAACCTGCATACATGGAAGCCCTGAACTGTGGTGATTATGATGATCTGATTGACCTAATG
GATAGAACTGGACCAGTTCTCGAAAAGTTGTCGTGTGAGACGACAAATGAGCTTTTGAGG
GTTATAGCTGAACAATTTCTTAATAAGAAGTTCTTTGACTTGGCACTGCCTTGGCTTCAA
CAGTTAGCAGATTTAAGCACGATTTATAAGCCAACTCAACTTTTTGCATCTGTGAGAGCA
CAAAAGGAGTTCCTTTCTGCATTGGAGGAAGCTGCAACGGGTGGATCTATGGAACCAGCC
TTGAGGATTGCAATTGCACAGCTCGGATTTAAACTATCCAAAGCTTTTGAGGTTGGCCCA
TGCAGGTGGACGTGCAAAACACTGTTATGTCACTTAGATAGGCCAGACTTTGAAATAGGC
GGTGAGGAAAATCTCAGCCAGAATGTGCAGAGAAAATGAAACTATCATGACCAATGCAAT
GTGAGATGTTTCTTGTCTAGTATATGCTCAGGCCACGAAAACAGTGCTTTAGGGAGCTTA
AGTTAATTTCTTGTAGCAGCACAACCTTTGTAACTTGTCGTATGATCTGTTTAATTAGCG
TGTGAAAGGCTAGAAGATTTCAATAGAGGTTGATAGTTTGGTAGTTTAAAACATGCGTGC
TTTGGTTCTCTACTGTAGGACTGGAAACTTTTGCTGTGTAGCAATGTGGCATGACTTATG
TTTGGTGCTTTCAGACGGGGCCGT