Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021365_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:7:150013106:150027321:1 gene:Zm00001d021365 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA primases
Sequence

ATGACGGCGTACGACCCCAAAGACGACGTCGACCGCCTCTTCGCCTGCTTCAAATGCGGC
GTCTCCCCTCCCAAGTCGGCCTTCAGGGAGAGGCCGCTCCCGCAGGCCAAGAAGTCGCGG
GGCTCGCCCGTGTCGGAGACTGCCGGTAGCGGTGGCCGGAGCTCCTCCGATGTTTCCACC
ACGCCGGATGCCGCAGCGGACAAGCGCGCGGCGCCGTCGTCGGCCAAATCTACAGGCCGC
AAGCACATGTCCCCATTCGTGTTCTACGGCTCCCCGCGGGGCGTCCAAGTCAAAAGGCCG
CAGAGCTTCCTGAGGCTGCTGCACGTGATCCGCATTGATCTCAAGAAGCAAACCGACTTC
AACCCCAGGGATGTTGTCTGGGCTACATTTCCTAGGCAAGACGAGGCGATCAGGTTCTCT
AAGGCATACGCACATACCAATGTCTTTTGCTATCAAGAGCATATGTCCGGTACGCGAAGG
TTCCTTGTGTCTACATACGACGAGTTCTGGAAAAGGTACAACGATATGGATTCCAAAATT
CGCCATCATTATGAGGTTATCCAGGAGGCTTCGCCTTGCCACATTTACTTTGATCTTGAG
TTTGATACAAGATTGAACAAGAAGAGAGACACAGATGAAATGGTGGATATATTGATTGCT
GTTGTATTCAGTGCTTTGCGTGATAAATATTCTATTGAAGGACATGAAGAGTGGATCACA
GAGCTAGACTCATCCACTGAAGAAAAGTTTTCACGCCATCTAATCATTCGTATACCCAAG
ATTGCATTTAAAGACAACTCCCATGTTGGTGCGTTTGTCTGTGAGGTCTGTTCACAAATT
GCAGCTCAGCGTACAACCAATCATGACCTTGATAAACTTTATATTACAAAAGAAATCAGC
TCAGGTCCTGTTGATCGGCTCTTTATGGATACTGCAGTTTACTCTCGTAATCGTTGTTTC
CGTTTAGTTTTCTCATCAAAGTCTGGGAAGAAATCATTTCTTGTGCCGACCAAACGTTTC
AAATGCCAGGAACTGGTTAGCCCTTGA

Peptide Sequence

PEP ID

Zm00001d021365_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:7:150013106:150027321:1 gene:Zm00001d021365 transcript:Zm00001d021365_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA primases
Sequence

MTAYDPKDDVDRLFACFKCGVSPPKSAFRERPLPQAKKSRGSPVSETAGSGGRSSSDVST
TPDAAADKRAAPSSAKSTGRKHMSPFVFYGSPRGVQVKRPQSFLRLLHVIRIDLKKQTDF
NPRDVVWATFPRQDEAIRFSKAYAHTNVFCYQEHMSGTRRFLVSTYDEFWKRYNDMDSKI
RHHYEVIQEASPCHIYFDLEFDTRLNKKRDTDEMVDILIAVVFSALRDKYSIEGHEEWIT
ELDSSTEEKFSRHLIIRIPKIAFKDNSHVGAFVCEVCSQIAAQRTTNHDLDKLYITKEIS
SGPVDRLFMDTAVYSRNRCFRLVFSSKSGKKSFLVPTKRFKCQELVSP

Transcript Sequence

Transcript ID

Zm00001d021365_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:150013106:150027321:1 gene:Zm00001d021365 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA primases
Sequence

ACTGGGGTTCCCGCTCACGAGCACTGAAAAACTGCCAAAACCGAGCGAACCACACACCCC
TTGTCAACGCTGTGGCGGCACGGCAGGCGATCCAAGGAAAGCGATGACGGCGTACGACCC
CAAAGACGACGTCGACCGCCTCTTCGCCTGCTTCAAATGCGGCGTCTCCCCTCCCAAGTC
GGCCTTCAGGGAGAGGCCGCTCCCGCAGGCCAAGAAGTCGCGGGGCTCGCCCGTGTCGGA
GACTGCCGGTAGCGGTGGCCGGAGCTCCTCCGATGTTTCCACCACGCCGGATGCCGCAGC
GGACAAGCGCGCGGCGCCGTCGTCGGCCAAATCTACAGGCCGCAAGCACATGTCCCCATT
CGTGTTCTACGGCTCCCCGCGGGGCGTCCAAGTCAAAAGGCCGCAGAGCTTCCTGAGGCT
GCTGCACGTGATCCGCATTGATCTCAAGAAGCAAACCGACTTCAACCCCAGGGATGTTGT
CTGGGCTACATTTCCTAGGCAAGACGAGGCGATCAGGTTCTCTAAGGCATACGCACATAC
CAATGTCTTTTGCTATCAAGAGCATATGTCCGGTACGCGAAGGTTCCTTGTGTCTACATA
CGACGAGTTCTGGAAAAGGTACAACGATATGGATTCCAAAATTCGCCATCATTATGAGGT
TATCCAGGAGGCTTCGCCTTGCCACATTTACTTTGATCTTGAGTTTGATACAAGATTGAA
CAAGAAGAGAGACACAGATGAAATGGTGGATATATTGATTGCTGTTGTATTCAGTGCTTT
GCGTGATAAATATTCTATTGAAGGACATGAAGAGTGGATCACAGAGCTAGACTCATCCAC
TGAAGAAAAGTTTTCACGCCATCTAATCATTCGTATACCCAAGATTGCATTTAAAGACAA
CTCCCATGTTGGTGCGTTTGTCTGTGAGGTCTGTTCACAAATTGCAGCTCAGCGTACAAC
CAATCATGACCTTGATAAACTTTATATTACAAAAGAAATCAGCTCAGGTCCTGTTGATCG
GCTCTTTATGGATACTGCAGTTTACTCTCGTAATCGTTGTTTCCGTTTAGTTTTCTCATC
AAAGTCTGGGAAGAAATCATTTCTTGTGCCGACCAAACGTTTCAAATGCCAGGAACTGGT
TAGCCCTTGATCAAACGGTCTTTTTTTGTATCAAGTGAATATGTTTTTGAGCACCAAAGA
TAAAATTCATCATGTTTAGAAACAATGAACTTCTGATTGATTTGCTATAATATTTTTTAT
AATGTTCTAAATGCTGTTGTGAGACCTTTTATAATATTTTAATAGACAATTTAAGTTGAA
GTCTGCACTTTTGTTTCTGCTGCTTGCAGAATGTAAAATCTGCTCAGTAGACGTAATACT
ATATATGCCAATTCCTATATCTGTTACAAAATCTCTGTTGTGGCATCATCAAATAATTGT
TCACATATGTCATTCTATTGAAAAGTTTGTGAACTTTTGATATCGATATCACCTATTACA
TGTGGCATTATATTCTTATTATTACAGAATGATAAAGATGTCTTTATGGAGTCACTTATT
TGTAGACTGGATGATAACTGTGAAAAACTGTTGATATGCAAACTAGACTTGGAATGCAAG
AAAACATTGCATTTTGACTCTGAAATCAGCATGTCTCAAGTAAGTGTTTGAAATTTGGAC
CACAAGCATTACATTTTTCCTGCTAGTGTACTTTTCTTAAAATTACTGAAACTTAGTACA
TTTCCTTGCTTTCATACTCCATTCCTTTTCTACAAGGTGTATTAGCATGTGGAAAAATTG
AAACGTGTTTTGCCATTGATCTATTACAATATGTCATGAGTAGCTACGAAATCAATGTCA
CATCAAAAGATTTCTGAAATATGGACTCATTGATATATTTTTCATACATTGAACATGCAA
ATGTTACTATATTTTTTGAAGTTTGACTTCAAATCCTAATACGTCCAATAAAAGGAAACA
GAGGGAGTATTTCAAATCATTCTGCAGTGGCAATCAATTATTGATATTTAGGAAGTATCG
GCAGTTTTTTTCGAAGGAAAATGGCATGAGCTATGCTTTTTTCAATTAAGAGAGGAAGGA
GATTTAACATAGTTTTTAAATACACAAGTGCAGCACTTCAAAAACAGTACACAATCTTTT
ATATTGTAGTTAACCACAGATTATAGATCTTTAAATTGAAGTGCAACATTAATTTCTTTT
CATAATCTTTTATACCTCAGTAGCCTTGGCTTGGACATGTAAGCTGCATGCATTGTGAGC
ATGGTGGTCTGAAAGCCCTGAGATGTTTGTGTTGGTACTCATAAGTTGCGTTCAGTAGAT
GGAGCATTTATGTCCAACTGAATACAAATCACCTAAACCTCAAAACTAACTCATGGAGGA
GCTCACTTTCGCTTGGAAATGTGTGGCCCCTTTTATGCTGGCTTGCCATCTGATTCTGCC
TCTTCACTACCAATCACCTGAATTCATTGTGCAAGGAACCATGAATCCTTTGCTGCTTGA
ACTTGTCGCTCTCTTGGTTTGTGCGGAAAGTATAAACTGATGGCAATAATCTTGAACACT
ATGCTGAAAACTTGTGTAGCCAAGTTTGGGAGCTTGAAAAAAATGTGCTTGTGCCTAAAT
GTCGTTATGCAGTAAGTGTTTTTATTGTCCTTGAGAGGTACTGAGAGGGTGCTTGTCTGC
CTTTCTCTCCTTAAGAAAATCAATTTAAATTTAGTATAGGCTGATTTTGTGTATATATTT
TTATTTTGCCATGTCCAGATTCAAGGAAGGAGCTACAGGCACCGCATTGCTACATATCAA
AATGATTTTTCTCATGCATATACTTGTGGAAAATCTCCTTTTCCACCTTTGGATGGTTTT
ATAGAATCCATCGCTTCTTTTGGAAATGTTTCAGGTTCATCTTCCTCATGATTATGCTTA
TGCCTTTCAATTTGTTATGATAGCCATTTGTTTCACTAATATGTGTATGTATATTCTAAA
ACATGACGTTTGCCATGTTTATTGTCTTAGACTTTTTCCAAATGTTGGAATGGATGTTCA
TATCATGTGTGTAGTCATGTCTTGTCCAGGGGTTGTAGAACGATAGCCGCACCGACCCTA
GCCTCTATCGCTAGGGCCACCACGGGTAGAGCCATCGCCCCTGTGGCCGCCCTTACGGGG
TTGGCGATCGTCGTCAGAGCTGGGAGCCTGAAGAGGAACTCCAGGATTGGGGGCGGTAGG
AGGGCGCGTATGAACTCTTGTCGATAGAGGGTGCGCCGTAGTGGACGCGGGGACTCATCG
TCCATGGTAAGCTCCTCGAGGAACAACTCGTTGCGGATGTCGTGGAAGGAGGGGAACAGG
ACGGTTCGCTTGATGAGCGCCTTCAGATGGTCATACCGCCGCCTAAGAGCACACAGAAGG
TTGAGGACGAGGGTGTGGCCAGACACGGTCTCGCCGAGGTTGTGGAGGGAGTTCGCCACA
CCCTTCATCCGACGACGGTACTCGCCGGGAGACAACATCAACAAGGACGTGGTCGTCGAG
GACATAGCTAGATTCTATGTTAGAATGGGAGAAACTTTCACTCTAATCAGGGTTGGGAAT
ATATTAATAGCTGAGTTATGTGGGCCAAGATCCATTACAATAGGGTATTACACATTAACA
GGATGTAAAAGAATCAGGCAGGGAAGCTGCCGACTATATTAAAAAGAAAAAAAGAAACCA
CAATAGAGTGATCCCAGAAGAGCCACACAACAACAAAAGGCAACAAAGATGGTAGCAACT
GAAATGTGATAATCTGTTGTATTGCAGGGAAAATTCGATCTTGGTTCTGGTTTTCACAGG
AGAGTTTGATAATCTACAACATGTTACGAAGCAGATACTGTGAGAATATTGGAAGAGAGC
ATAAGGGCAATCATGGTAACAATAACATTTTAACATCTAGAACAACAACATATAACTTTT
CTGCAGCATCAGCTGTCTCAAATACCCAGATATTTTCCTTAGTATACTATCACTAATTAT
GTCACGAAATGTACCAGTGTTTTACATTGTTGATTTCCAGAGAGCAGCATACTACCAAAA
GTGTCATGACCCTGATTGTCGAGGTAAGCGAGGGCCATCTTTGCAGCGCAGGCAGATTAT
CCTTAGTCATGACATGAATGTTTTGGAGTAGGTTACCGTTCTCCCCTGCGTCCTGTACCT
TGGGATGTGATTCCTGAGCTAGTGGAGTCAGACCAGATAGAATACCAGGGCCATGCCATG
GAAACCAACATTGAAAACAGCAGCATGAGCGGTAAATCAATCACGGGGGCTGGTGCTGAG
GATCCTGAATGGTGGGAACAAGTGGTGGAATTTGCGGACAGCATCGAGAACATGGATCAT
TCTTTGGCTACCTTGGAAGTGAAATCTGACGCCAGCATCGAGAACATGGATCATGCTCCC
AGCTTGTGTGCCTCGGAAGAAAACGGTTGTTTTGAAGCTGACCCTGAGTGGGTGATGCAC
GCGGAAAGAGCCATGGAGCAGTACGAGGAACAAAGCGGAGGATCGCAGTCACACGCAACT
TCCCAAGTCTTTGATCTCGAGGATGTTTAACAGTAGATGCTGTTCTAAACAATTTGAACA
GTGACTTGTAAATATACGTTTTATGATATATTTTAATCTAAAAATATGTAGATAAATAAT
AAAAATGGATATTATGAATGAAGCAGTGAGAACATAATCT