Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021343_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:149427463:149430451:1 gene:Zm00001d021343 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCCCCACGGGAACAGACCTCCCTCCTCTCGCGGCAGCGCTGCTGGCGCCGCGCCAGG GACCTCTTCAACCGCCTGCGCGCGCTCCCCGGATACGCCCCCAACCCCGTCCATGACGCC GTCCTCCTGCGCCACCTCGCCCGCGCGCGCCGGTGGGCCGAGCTCCACCGCGCCTGGATC GGGATGCCCTTCCCACCCTCCAACCCGGCCTACGCAGCCCTCGCCGACGCACTCGCCAAG GCCGGGTTGGCGCGGGGAGCCCTCCTCCTGCTCCGCCACATGCGGACCCGGGGTGTCGCG CCTGATGAGGTGTCCATGAACACCTTCGTCCGCATCCTCAAGGACGAGGGCCGCCACGAC GACGCGCTCGCTCTCTTCCACAGTTGGTGCGACGGCAGGTTCGAGGTCGATTTCCTTGAT CTTGACTGCATCACAGTTGATTTGGACGGTCCTATGCAGTTCTTGCTTGCTGACATGTAC GACGACAAAATTGCTGCTCCTGCTGCTGGTGTTGCACCAGAGCGTCCTAGGAAGCCCAAG CTTGTGGTGACGTATAACGTGTTGATTGATCTCTATGGGAAAGCTGGGAAGCTGAAGAAT GCGCTAGACATGTTTTTGGACATGCCAGCTCATGGGGTTATGCCAGATACGTATACGTTC AATACACTAATCAACATATTTGGGTTTTCTGGCAATTCAGCGCAGGCAGAGGTGCTGTTT GCTAGCATGGTGATTAGGGGTGTCAAACCTGATACTAAGACATACAATGTAATGATGACT GTGTTTGCATCCATTGGAGATTTAGAGGGAGTTCTGAAGTACTACTGTCAAATCAGGAAT GCAGGCTTACATCCTGATGCTGTGACCTATAGGATTTTGCTGCAGGTGCTATGTGAGAGG AAGATGGTACACAAAGCAGAAGATGTGATTGAAGGGATTCTCAAAGCTGGCAGTTTTGTT CATGAACAGTCCCTTCCTGTTGTCATGAAGATGTATGTTGATCTAGGATTGCTTGATGAG GCGATTGCATTCTTTGAGAAACATTGCCGAGGTAAAGGGGTCTCATCCAAGAACTTCAGT GCGATCATGGATGTTTTTGCAGGGAGAGGTCTGTGGGAAGAAGCTGAACATATCTTCTGC TCTGAAAGAGGAGATGGGAATGAGAAGGACATTGTGGAATATAATGTGATGATAAAGGCT TATGGTCAGGCAAAGCAGTATGACAGAGTCTCTTCTTTGTTTGAGAGCATGGAGGAATCT GGTGTTCCATCAGATGAGTGCACATATAATTCGTTGATTCAAATGTTTTCTTTTGGTGGA TTTCCACACAGAGCTAAGAAGCTGTTAGGTAAAATGAAAGATGCAGGATTTGAACCGAAA TGTGAGACATACTCTGCCATCATTAGAAGTTATTCTCGCCATTGCTTGGTACCGGAGGCC ATAGATCTGTTCAATGAAATGAAGGCATCAGGTGTTGAGCCGAATGTCATTGTTTATGGA ATTTTGATTGACATGTTTGCAGAGACAGGGAATGTTAAGGAAGCACTTCATTATAGTAAC TTGTTGGAACAATCTGGAATCTCTCCAAACCATATTGTTCTAACTTCTCTTATAAAAGCC TACAGCAAATTTAATTCCTGGAAGGAAGCACAGGATTTGTATTCAAGGATGAATGACATG GATGGTGGCCCTGACATCATTGCCTCCAATGCCATGCTAAACCTTTATGCAAAACTTGAG ATGGTCACTGAGGCAAAAGAGATCTTTGACAGCTTAAGAAGAAATAACCATGCTGATGCT GTTTCATACACTACCATGGCATACCTCTACAAGAGCATTGGTTTGCTTAGTGAGTCCATT AGGATCACACATAAATTACAAAAATCAGGTTTGCTATCTGATTGTGCTTCATGCAATGCT GTTATGGCGTGTTATGGGGCTAAGGGCAACCTAAGAGATTGTGCAGAGTTAGTGCATCAA ATGGTGGTGGCTAACATTCCACCAGACGCGTCAACATTTGAAATGATATTTTCTCTACTG AAAAATGGTCATGTTTCAACAAAAGAAATTTTACAGCTAGAATCAGCATATGATGATGGC AAGAAGTCTGCCAAGCAAGCTATCATTGCATTCTTGTTCTCCGTAGCTGGCATGCATGAT GCTGCATTAGAGATTTGCGGGAAGATGTTAATGCCACAGTCGACATTGGATGCATGTGCA TATAATGTTTGCTTCAAGGTCTATGCTTCCTCTAGGAAGGTGGAAAAAGCTTTCAGTTTG TTCATGTGGATGCGTGATCTCGGGCTTAAACCGGACACATCTACTTGCAACCATTTGGCC ACTTGTTATGGGAGACTTGGAGCATTGGAAGGCACCATTAGCTACTTTTGGGCCTAG

Peptide Sequence

PEP ID	Zm00001d021343_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:149427463:149430451:1 gene:Zm00001d021343 transcript:Zm00001d021343_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MSPREQTSLLSRQRCWRRARDLFNRLRALPGYAPNPVHDAVLLRHLARARRWAELHRAWI GMPFPPSNPAYAALADALAKAGLARGALLLLRHMRTRGVAPDEVSMNTFVRILKDEGRHD DALALFHSWCDGRFEVDFLDLDCITVDLDGPMQFLLADMYDDKIAAPAAGVAPERPRKPK LVVTYNVLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLF ASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLCER KMVHKAEDVIEGILKAGSFVHEQSLPVVMKMYVDLGLLDEAIAFFEKHCRGKGVSSKNFS AIMDVFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDRVSSLFESMEES GVPSDECTYNSLIQMFSFGGFPHRAKKLLGKMKDAGFEPKCETYSAIIRSYSRHCLVPEA IDLFNEMKASGVEPNVIVYGILIDMFAETGNVKEALHYSNLLEQSGISPNHIVLTSLIKA YSKFNSWKEAQDLYSRMNDMDGGPDIIASNAMLNLYAKLEMVTEAKEIFDSLRRNNHADA VSYTTMAYLYKSIGLLSESIRITHKLQKSGLLSDCASCNAVMACYGAKGNLRDCAELVHQ MVVANIPPDASTFEMIFSLLKNGHVSTKEILQLESAYDDGKKSAKQAIIAFLFSVAGMHD AALEICGKMLMPQSTLDACAYNVCFKVYASSRKVEKAFSLFMWMRDLGLKPDTSTCNHLA TCYGRLGALEGTISYFWA

Transcript Sequence

Transcript ID	Zm00001d021343_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:149427463:149430451:1 gene:Zm00001d021343 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCCCCACGGGAACAGACCTCCCTCCTCTCGCGGCAGCGCTGCTGGCGCCGCGCCAGG GACCTCTTCAACCGCCTGCGCGCGCTCCCCGGATACGCCCCCAACCCCGTCCATGACGCC GTCCTCCTGCGCCACCTCGCCCGCGCGCGCCGGTGGGCCGAGCTCCACCGCGCCTGGATC GGGATGCCCTTCCCACCCTCCAACCCGGCCTACGCAGCCCTCGCCGACGCACTCGCCAAG GCCGGGTTGGCGCGGGGAGCCCTCCTCCTGCTCCGCCACATGCGGACCCGGGGTGTCGCG CCTGATGAGGTGTCCATGAACACCTTCGTCCGCATCCTCAAGGACGAGGGCCGCCACGAC GACGCGCTCGCTCTCTTCCACAGTTGGTGCGACGGCAGGTTCGAGGTCGATTTCCTTGAT CTTGACTGCATCACAGTTGATTTGGACGGTCCTATGCAGTTCTTGCTTGCTGACATGTAC GACGACAAAATTGCTGCTCCTGCTGCTGGTGTTGCACCAGAGCGTCCTAGGAAGCCCAAG CTTGTGGTGACGTATAACGTGTTGATTGATCTCTATGGGAAAGCTGGGAAGCTGAAGAAT GCGCTAGACATGTTTTTGGACATGCCAGCTCATGGGGTTATGCCAGATACGTATACGTTC AATACACTAATCAACATATTTGGGTTTTCTGGCAATTCAGCGCAGGCAGAGGTGCTGTTT GCTAGCATGGTGATTAGGGGTGTCAAACCTGATACTAAGACATACAATGTAATGATGACT GTGTTTGCATCCATTGGAGATTTAGAGGGAGTTCTGAAGTACTACTGTCAAATCAGGAAT GCAGGCTTACATCCTGATGCTGTGACCTATAGGATTTTGCTGCAGGTGCTATGTGAGAGG AAGATGGTACACAAAGCAGAAGATGTGATTGAAGGGATTCTCAAAGCTGGCAGTTTTGTT CATGAACAGTCCCTTCCTGTTGTCATGAAGATGTATGTTGATCTAGGATTGCTTGATGAG GCGATTGCATTCTTTGAGAAACATTGCCGAGGTAAAGGGGTCTCATCCAAGAACTTCAGT GCGATCATGGATGTTTTTGCAGGGAGAGGTCTGTGGGAAGAAGCTGAACATATCTTCTGC TCTGAAAGAGGAGATGGGAATGAGAAGGACATTGTGGAATATAATGTGATGATAAAGGCT TATGGTCAGGCAAAGCAGTATGACAGAGTCTCTTCTTTGTTTGAGAGCATGGAGGAATCT GGTGTTCCATCAGATGAGTGCACATATAATTCGTTGATTCAAATGTTTTCTTTTGGTGGA TTTCCACACAGAGCTAAGAAGCTGTTAGGTAAAATGAAAGATGCAGGATTTGAACCGAAA TGTGAGACATACTCTGCCATCATTAGAAGTTATTCTCGCCATTGCTTGGTACCGGAGGCC ATAGATCTGTTCAATGAAATGAAGGCATCAGGTGTTGAGCCGAATGTCATTGTTTATGGA ATTTTGATTGACATGTTTGCAGAGACAGGGAATGTTAAGGAAGCACTTCATTATAGTAAC TTGTTGGAACAATCTGGAATCTCTCCAAACCATATTGTTCTAACTTCTCTTATAAAAGCC TACAGCAAATTTAATTCCTGGAAGGAAGCACAGGATTTGTATTCAAGGATGAATGACATG GATGGTGGCCCTGACATCATTGCCTCCAATGCCATGCTAAACCTTTATGCAAAACTTGAG ATGGTCACTGAGGCAAAAGAGATCTTTGACAGCTTAAGAAGAAATAACCATGCTGATGCT GTTTCATACACTACCATGGCATACCTCTACAAGAGCATTGGTTTGCTTAGTGAGTCCATT AGGATCACACATAAATTACAAAAATCAGGTTTGCTATCTGATTGTGCTTCATGCAATGCT GTTATGGCGTGTTATGGGGCTAAGGGCAACCTAAGAGATTGTGCAGAGTTAGTGCATCAA ATGGTGGTGGCTAACATTCCACCAGACGCGTCAACATTTGAAATGATATTTTCTCTACTG AAAAATGGTCATGTTTCAACAAAAGAAATTTTACAGCTAGAATCAGCATATGATGATGGC AAGAAGTCTGCCAAGCAAGCTATCATTGCATTCTTGTTCTCCGTAGCTGGCATGCATGAT GCTGCATTAGAGATTTGCGGGAAGATGTTAATGCCACAGTCGACATTGGATGCATGTGCA TATAATGTTTGCTTCAAGGTCTATGCTTCCTCTAGGAAGGTGGAAAAAGCTTTCAGTTTG TTCATGTGGATGCGTGATCTCGGGCTTAAACCGGACACATCTACTTGCAACCATTTGGCC ACTTGTTATGGGAGACTTGGAGCATTGGAAGGCACCATTAGCTACTTTTGGGCCTAG