Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d021329_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:149024878:149026351:1 gene:Zm00001d021329 gene_biotype:protein_coding transcript_biotype:protein_coding description:Agmatine coumaroyltransferase

Sequence

ATGGATGTGAAGGTGCTGAGCTCCAAGCTCGTGAAACCGTCGTACCCGGCGGGCGCGCCG
CGGCCGGACACCACGGAGCACGTGCCGTCGTCCGTGTTCGACAGAGCCACGTACAACATG
CAGATGGCCATCATCTACGCCTTCTCCCCGCCGGGTCCCTCCCCGGGCGCCATCGAGCGC
GGCCTCGCCGCGGTGCTGGGCGCGTACCGGCTCTTCGCGGGGCAGGTCCGCGCGGGCCCG
GACGACGGCGGCGCGCCGGGGGTGCTGCTCAACGACCACGGCGCCCGCCTCGTCGAGGCG
TCCGTGGACGCGCGCCTCGCCGACATCGCCCCCACCAAGCCGTCGCCCGCGGTGCTGCGC
CTGCACCCGGACCTGGACGGCGACATCCAGGAGGTGGTGCAGGTGCAGCTCACGCGCTTC
GCGTGCGGCTCCCTCGCCGTGGGGTTCACGGCCAACCACGCCGTGGCGGACGGCCACGCC
ACCAGCGACTTCCTCGTCGCCTGGGGCCGCGCCGCGCGGGGGCTGGGCCCGTCGTCGTCC
CCGGTGCCAGTCCACCGCCCGGGCCTCTTCCCGCCGCGCCACCCGCCGCGCGCCGAGTTC
GAGCACCGCGGCGTGGAGTACTGCTACTACAGGCCCGCGCCGCCGTCGCCGGCACACGCA
CACCACCCTGCCGCGGCCCACGGAGGAGACACCCGGCACAGCGTCGTGATCCACAAGGCA
CACTTCACCAAGGACTTCGTCGCGGGGCTCCGCGCCAGGGCGTCCCAAGGCCGCGGCCGC
CCCTTCAGCCGGTTCGAGACGATCCTAGCGCACGTGTGGCGCGCCATGACGCGCGCGCGG
GGGCTCGGCGTCGACCCGCTCCAGACCTCCACCGTGCGCATCTCCGTGGACGGGCGGCCG
CGCCTCGCGGCGCCGGCCGGCTACTTCGGCAACCTGGTCCTCTGGGCGTTCCCGCGCGCC
ACGGTGGGGGACCTGCTCAGCCGGCCGCTGAAGCACGCGGCGCAGGCGATCCACGACGCC
GTCGCGCGCGTGGACGGCGCCTACTTCCAGTCGTTCGTGGACTGGGCCAGCTCCGGCGCC
GTCGACAAGGAAGTGCTGCAGACCACGGCCGTGCTCAAGGACGTGCTGTGCCCGGACCTC
GAGGTGGACAGCTGGCTCACCTTCCCGTTCTACGAGCTGGACTTCGGCACGGGCAGCCCG
ACCTACTTCATGCCGTCCTACTTCCCCACGGAAGGGATGCTGTTCCTCGTGCCGTCCTAC
CTGGGCGACGGCAGCGTGGACGCCTTCGTGCCGCTGTTCGAGCACAACCTGGAGGCGTTC
AAGCAGTGCTGCTACTCCATGGAGGAGTAG

Peptide Sequence

PEP ID

Zm00001d021329_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:149024878:149026351:1 gene:Zm00001d021329 transcript:Zm00001d021329_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Agmatine coumaroyltransferase

Sequence

MDVKVLSSKLVKPSYPAGAPRPDTTEHVPSSVFDRATYNMQMAIIYAFSPPGPSPGAIER
GLAAVLGAYRLFAGQVRAGPDDGGAPGVLLNDHGARLVEASVDARLADIAPTKPSPAVLR
LHPDLDGDIQEVVQVQLTRFACGSLAVGFTANHAVADGHATSDFLVAWGRAARGLGPSSS
PVPVHRPGLFPPRHPPRAEFEHRGVEYCYYRPAPPSPAHAHHPAAAHGGDTRHSVVIHKA
HFTKDFVAGLRARASQGRGRPFSRFETILAHVWRAMTRARGLGVDPLQTSTVRISVDGRP
RLAAPAGYFGNLVLWAFPRATVGDLLSRPLKHAAQAIHDAVARVDGAYFQSFVDWASSGA
VDKEVLQTTAVLKDVLCPDLEVDSWLTFPFYELDFGTGSPTYFMPSYFPTEGMLFLVPSY
LGDGSVDAFVPLFEHNLEAFKQCCYSMEE

Transcript Sequence

Transcript ID

Zm00001d021329_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:149024878:149026351:1 gene:Zm00001d021329 gene_biotype:protein_coding transcript_biotype:protein_coding description:Agmatine coumaroyltransferase

Sequence

AACAAAAGCTGCAGCGCGATCGAGCAGCCAGAGGCCAGAGCCAGTTTCACTTCACTATCA
CTCACCAGAGGTACGGTGGGTTTTAGTGGTCCACCGGCCGATCGATCATACCATACCATA
CCATATGGATGTGAAGGTGCTGAGCTCCAAGCTCGTGAAACCGTCGTACCCGGCGGGCGC
GCCGCGGCCGGACACCACGGAGCACGTGCCGTCGTCCGTGTTCGACAGAGCCACGTACAA
CATGCAGATGGCCATCATCTACGCCTTCTCCCCGCCGGGTCCCTCCCCGGGCGCCATCGA
GCGCGGCCTCGCCGCGGTGCTGGGCGCGTACCGGCTCTTCGCGGGGCAGGTCCGCGCGGG
CCCGGACGACGGCGGCGCGCCGGGGGTGCTGCTCAACGACCACGGCGCCCGCCTCGTCGA
GGCGTCCGTGGACGCGCGCCTCGCCGACATCGCCCCCACCAAGCCGTCGCCCGCGGTGCT
GCGCCTGCACCCGGACCTGGACGGCGACATCCAGGAGGTGGTGCAGGTGCAGCTCACGCG
CTTCGCGTGCGGCTCCCTCGCCGTGGGGTTCACGGCCAACCACGCCGTGGCGGACGGCCA
CGCCACCAGCGACTTCCTCGTCGCCTGGGGCCGCGCCGCGCGGGGGCTGGGCCCGTCGTC
GTCCCCGGTGCCAGTCCACCGCCCGGGCCTCTTCCCGCCGCGCCACCCGCCGCGCGCCGA
GTTCGAGCACCGCGGCGTGGAGTACTGCTACTACAGGCCCGCGCCGCCGTCGCCGGCACA
CGCACACCACCCTGCCGCGGCCCACGGAGGAGACACCCGGCACAGCGTCGTGATCCACAA
GGCACACTTCACCAAGGACTTCGTCGCGGGGCTCCGCGCCAGGGCGTCCCAAGGCCGCGG
CCGCCCCTTCAGCCGGTTCGAGACGATCCTAGCGCACGTGTGGCGCGCCATGACGCGCGC
GCGGGGGCTCGGCGTCGACCCGCTCCAGACCTCCACCGTGCGCATCTCCGTGGACGGGCG
GCCGCGCCTCGCGGCGCCGGCCGGCTACTTCGGCAACCTGGTCCTCTGGGCGTTCCCGCG
CGCCACGGTGGGGGACCTGCTCAGCCGGCCGCTGAAGCACGCGGCGCAGGCGATCCACGA
CGCCGTCGCGCGCGTGGACGGCGCCTACTTCCAGTCGTTCGTGGACTGGGCCAGCTCCGG
CGCCGTCGACAAGGAAGTGCTGCAGACCACGGCCGTGCTCAAGGACGTGCTGTGCCCGGA
CCTCGAGGTGGACAGCTGGCTCACCTTCCCGTTCTACGAGCTGGACTTCGGCACGGGCAG
CCCGACCTACTTCATGCCGTCCTACTTCCCCACGGAAGGGATGCTGTTCCTCGTGCCGTC
CTACCTGGGCGACGGCAGCGTGGACGCCTTCGTGCCGCTGTTCGAGCACAACCTGGAGGC
GTTCAAGCAGTGCTGCTACTCCATGGAGGAGTAG