Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021324_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:148944181:148945515:1 gene:Zm00001d021324 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	ATGGAGGTTAAGGTGCTGAGCTCCAAGCTCGTCAAGCCCGCTTACAATGCCGGTGCGGGC CCAGCGCCGGCGGTCAGTGCGGATGAGTACACCCCCCTGACCATCTTCGACGTGGTCACG TACAAGATGCAGATGGCCATCATCTACGCCTTCCCGCCGCCGGCCCCATCGACGGCGGCC ATCGAGAACGGCCTGGCCGCGGTGCTGGCCGAGTACCGCGCATTCGCGGGGCAGCTGGGC GTGGCCCCAGACGGCACGCCCGCGGTGCTGCTCAACGACCGCGGCGCGCGCCTCGTGGAG GCGGCCGTGGACGCGGACCTCGTGGACATGGCGCCCGCCAAGCCCACCCCGGAGCTGCTC CGGCTGCACCCGGACCTGGAGGAGGAGGAGCTCCAGGAGGTGGTGCTCCTGCAGCTGACC CGGTTCCGGTGCGGCTCACTCGCCGTCGGGTTCACGTCCAACCACGTCGTGGCCGACGGC CACGCCACCAGCAACTTCCTCGTGGCGTGGGGGCGCGCCACCAGGGGCCTCCCGACGGGC CTGCCCCCCGTGCCCCGCCAGGCGGGGCTCTTCAAGCCGCGCCCTTCGCCCCGCGTCGAC TTCGACCACCGCAGCAGGGAGTGGTACCTGCCGTCGCCCGCCGAGACCGAGAAGCAGCAC GGCCACGGCCGCGAGGGCGCGGCGGCGGCGGAGAGCATCGTGATCCAGAAGGCGCATTTC ACCAAGGACTTCATCGCGCGGCTCCGCGCCAAGGCATCGGAAGGCCGCGGCCGCCCGTTC AGCCGGTTCGAGACCGTCCTGGCCCACCTGTGGCGCGCCATGACGCGCGCCCGCGGGCTG AGCCCCGACGAGACCTCGCAGATCCGGCTGTCCGTGGACGGGCGCCACCGCCTCGGCCTC CCCGCCGAGTACTTCGGCAACCTGGTCCTCTGGGCGTTCCCGACCGCCACGGTGGCGGAC CTGCTGGGGCGGCCGCTGAAGCACGCGGCGCAGGTGATCCACGACGAGGTGGCGAGCGTC GACGGCAGCTACTTCAGGTCGTTCATCGACTTCGCGACGTCCGGCGCCGCGGAGAGGGAG GGGCTGGCGCCCAGCGCCGTCTGCAAGGACGTCCTGTGCCCGAACGTGGAGGTGGACAGC TGGCTCACCTTCCCGTTCTACGAGCTGGACTTCGGCACGGGCAGCCCGACCTACTTCATG CCGTCCTACTTCCCCACGGAGGGGATGCTGTTCCTCGTGCCGTCCTACATCGGCGATGGC AGCGTCGACGCATTCGTGCCCGTCTTCCAGCAAAACCTCGAGGCGTTCAAGGAGTGCTGC TACGCCATGGACTAG

Peptide Sequence

PEP ID	Zm00001d021324_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:148944181:148945515:1 gene:Zm00001d021324 transcript:Zm00001d021324_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	MEVKVLSSKLVKPAYNAGAGPAPAVSADEYTPLTIFDVVTYKMQMAIIYAFPPPAPSTAA IENGLAAVLAEYRAFAGQLGVAPDGTPAVLLNDRGARLVEAAVDADLVDMAPAKPTPELL RLHPDLEEEELQEVVLLQLTRFRCGSLAVGFTSNHVVADGHATSNFLVAWGRATRGLPTG LPPVPRQAGLFKPRPSPRVDFDHRSREWYLPSPAETEKQHGHGREGAAAAESIVIQKAHF TKDFIARLRAKASEGRGRPFSRFETVLAHLWRAMTRARGLSPDETSQIRLSVDGRHRLGL PAEYFGNLVLWAFPTATVADLLGRPLKHAAQVIHDEVASVDGSYFRSFIDFATSGAAERE GLAPSAVCKDVLCPNVEVDSWLTFPFYELDFGTGSPTYFMPSYFPTEGMLFLVPSYIGDG SVDAFVPVFQQNLEAFKECCYAMD

Transcript Sequence

Transcript ID	Zm00001d021324_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:148944181:148945515:1 gene:Zm00001d021324 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	ATGGAGGTTAAGGTGCTGAGCTCCAAGCTCGTCAAGCCCGCTTACAATGCCGGTGCGGGC CCAGCGCCGGCGGTCAGTGCGGATGAGTACACCCCCCTGACCATCTTCGACGTGGTCACG TACAAGATGCAGATGGCCATCATCTACGCCTTCCCGCCGCCGGCCCCATCGACGGCGGCC ATCGAGAACGGCCTGGCCGCGGTGCTGGCCGAGTACCGCGCATTCGCGGGGCAGCTGGGC GTGGCCCCAGACGGCACGCCCGCGGTGCTGCTCAACGACCGCGGCGCGCGCCTCGTGGAG GCGGCCGTGGACGCGGACCTCGTGGACATGGCGCCCGCCAAGCCCACCCCGGAGCTGCTC CGGCTGCACCCGGACCTGGAGGAGGAGGAGCTCCAGGAGGTGGTGCTCCTGCAGCTGACC CGGTTCCGGTGCGGCTCACTCGCCGTCGGGTTCACGTCCAACCACGTCGTGGCCGACGGC CACGCCACCAGCAACTTCCTCGTGGCGTGGGGGCGCGCCACCAGGGGCCTCCCGACGGGC CTGCCCCCCGTGCCCCGCCAGGCGGGGCTCTTCAAGCCGCGCCCTTCGCCCCGCGTCGAC TTCGACCACCGCAGCAGGGAGTGGTACCTGCCGTCGCCCGCCGAGACCGAGAAGCAGCAC GGCCACGGCCGCGAGGGCGCGGCGGCGGCGGAGAGCATCGTGATCCAGAAGGCGCATTTC ACCAAGGACTTCATCGCGCGGCTCCGCGCCAAGGCATCGGAAGGCCGCGGCCGCCCGTTC AGCCGGTTCGAGACCGTCCTGGCCCACCTGTGGCGCGCCATGACGCGCGCCCGCGGGCTG AGCCCCGACGAGACCTCGCAGATCCGGCTGTCCGTGGACGGGCGCCACCGCCTCGGCCTC CCCGCCGAGTACTTCGGCAACCTGGTCCTCTGGGCGTTCCCGACCGCCACGGTGGCGGAC CTGCTGGGGCGGCCGCTGAAGCACGCGGCGCAGGTGATCCACGACGAGGTGGCGAGCGTC GACGGCAGCTACTTCAGGTCGTTCATCGACTTCGCGACGTCCGGCGCCGCGGAGAGGGAG GGGCTGGCGCCCAGCGCCGTCTGCAAGGACGTCCTGTGCCCGAACGTGGAGGTGGACAGC TGGCTCACCTTCCCGTTCTACGAGCTGGACTTCGGCACGGGCAGCCCGACCTACTTCATG CCGTCCTACTTCCCCACGGAGGGGATGCTGTTCCTCGTGCCGTCCTACATCGGCGATGGC AGCGTCGACGCATTCGTGCCCGTCTTCCAGCAAAACCTCGAGGCGTTCAAGGAGTGCTGC TACGCCATGGACTAG