Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d021287_T022
CDS Infomation	cds chromosome:B73_RefGen_v4:7:147960703:147963603:-1 gene:Zm00001d021287 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	ATGTTGGCTGTGTTTGAAACAGCCATTAATATTTTTTATGCATCCTTATTTTTTTTTGTG TTTGGCCATTTTTTTCGTCTTCAGGTGTTTGATGCTATAACTGCTAGTCAACAAGAATCA GGCACATTGAGTGTTGATTTTTTTAGGAATCATGCATCTCCCTCTTGGAAAACTGATGAT CTAGTCACCGAGAAGAGCATGGATGTCAATGACAATGCTAAAGCTGAAAATAGTTTGCTA GAACATTCTGTGCCAACAAATAGATCACCCAAAGATCCAGATGAACATCAAGTTGACAAA GCAGCAAAAGTAGCTCGAAGGAAACTTAGGGAGAAAAGGCGTGAGAAGAGAGCAATGGAT TTGGTTCATAAAGATGATGAAGCACGTATTAAGCTGGAAAATGCTGCCATTGAGCGATCA AAAGCTGTCGATTCTGCTGTGCTTGGAAAATACAGCATATGGCGAAAAGAGAATGAGAAT GAGAATTCAGACTCTACAGTTAGGCTGATGAGGGACCAAATTATTATGGCTCGTGTCTAT TCTACGCTTGCTAAATCAAAGAACAAGAACGATCTATATCAAAAACTGCAGACTCGAATC AGAGAAAGCCAGCGGGCTGTTGGAGAGGCTAATGCTGATGCTGACCTGCATCACAGCGCA CCAGAAAAAATCAGAGCAATGGGTCAAGTTTTATCAAAGGCTAGAGAAGAACTTTATGAT TGTACGGCAATCACTCAGAGAATAAGGGCTATGCTTCAGTCAGCTGATGAACAGGTCAGG AGCTTGAAGAAGCAGAGTACATTTCTTAGCCAGTTGGCTGCAAAGACAATTCCAAACAGC ATTCACTGCTTGTCTATGCGTTTAACAATTGATTACTATATCCTGCCCCTTGAGGAACGG AAATTCCCAAGGAGTGAAAATTTAGAAAACCCAAATCTCTATCACTATGCACTTTTCTCT GATAATGTTTTGGCAGCCTCTGTTGTTGTGAACTCAACCATAATGAATGCTAAGGAACCA GAGAAACATGTTTTCCATCTTGTGACTGACAAGTTAAACTTTGGAGCCATGAACATGTGG TTTCTGCTGAACCCACCTGGCAAGGCCACCATCCATGTTGAGAATGTGGACGAATTTAAG TGGTTGAACTCATCATACTGTCCTGTGTTGCGGCAACTTGAGTCTGCTGCCATGAAAGAG TACTATTTCAAAGCTGATCGTCCCACCACTCTCTCAGCAGGTTCTTCGAACCTAAAGTAT CGGAACCCCAAGTACCTCTCTATGCTGAACCACTTGAGGTTCTATCTCCCAGAGGTCTAT CCAAAGTTGGATAAGATACTCTTCCTCGACGATGACATAGTTGTGCAGAAAGATTTAACA GGGCTGTGGGATGTTGATCTTAATGGAAAGGTCAATGGTGCTGTGGAAACCTGTGGGGAG AGTTTTCACCGTTTTGACAAATATCTTAATTTTTCAAATCCACACATTGCTCGGAACTTT GATCCAAATGCATGTGGCTGGGCTTATGGGATGAACATCTTTGATCTGAGGGAGTGGAAG AAGAAAGATATTACTGGGATCTACCACAAATGGCAAAATATGAATGAAGACAGGGTCCTT TGGAAGCTTGGGACACTTCCGCCTGGCCTCTTGACCTTCTATAAGTTGACGCACCCACTG GACAAGTCATGGCATGTTCTTGGATTAGGATACAACCCAAGCATTGACCGTTCAGAGATA GACAATGCTGCTGTGGTTCATTACAATGGGAACATGAAGCCATGGCTGGAGCTAGCAATG ACCAAGTACCGACCATATTGGACCAAGTATATCAAGTATGATCACCCTTACATCCGTGGA TGCAACTTGAGTGAGTAG

Peptide Sequence

PEP ID	Zm00001d021287_P022
PEP Infomation	pep chromosome:B73_RefGen_v4:7:147960703:147963603:-1 gene:Zm00001d021287 transcript:Zm00001d021287_T022 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	MLAVFETAINIFYASLFFFVFGHFFRLQVFDAITASQQESGTLSVDFFRNHASPSWKTDD LVTEKSMDVNDNAKAENSLLEHSVPTNRSPKDPDEHQVDKAAKVARRKLREKRREKRAMD LVHKDDEARIKLENAAIERSKAVDSAVLGKYSIWRKENENENSDSTVRLMRDQIIMARVY STLAKSKNKNDLYQKLQTRIRESQRAVGEANADADLHHSAPEKIRAMGQVLSKAREELYD CTAITQRIRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNSIHCLSMRLTIDYYILPLEER KFPRSENLENPNLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMW FLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKY RNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGKVNGAVETCGE SFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLREWKKKDITGIYHKWQNMNEDRVL WKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDNAAVVHYNGNMKPWLELAM TKYRPYWTKYIKYDHPYIRGCNLSE

Transcript Sequence

Transcript ID	Zm00001d021287_T022
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:147960703:147963603:-1 gene:Zm00001d021287 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	AATTGTGTGTGTATACACCAAACTGTATCAATGCATGGCCCATGTCATAATGTGGTGAAT GAACCCTAGATTTAGACCTCATTAATCACCTGTTTTTTATATCATTCATGGCAAGTTGGC AACTATTGTTATTTCCCTGTGTTATGTAGTTATCAGTTATAGAAAATATTATTCCCAGCC TAGTCTGTTTGACTAACCTTGTTCCACTATTCTGGTGTGTTTTCTGAATTCGATGTTCTT CCATTTCCTATTTTTTTGTTTTCTGTTTCCTTTCTATTCTCTTTCATTTGTTTGGGTCCA AACTTTTCATTTGATCTTTCATCTTCTTAACTTATTGGCTACTGGATGTACTATTGCAGT CTGTTTGTTGTATGTTTGTGTTAATTCAGTAACTAGTATTCATAATGTTGGCTGTGTTTG AAACAGCCATTAATATTTTTTATGCATCCTTATTTTTTTTTGTGTTTGGCCATTTTTTTC GTCTTCAGGTGTTTGATGCTATAACTGCTAGTCAACAAGAATCAGGCACATTGAGTGTTG ATTTTTTTAGGAATCATGCATCTCCCTCTTGGAAAACTGATGATCTAGTCACCGAGAAGA GCATGGATGTCAATGACAATGCTAAAGCTGAAAATAGTTTGCTAGAACATTCTGTGCCAA CAAATAGATCACCCAAAGATCCAGATGAACATCAAGTTGACAAAGCAGCAAAAGTAGCTC GAAGGAAACTTAGGGAGAAAAGGCGTGAGAAGAGAGCAATGGATTTGGTTCATAAAGATG ATGAAGCACGTATTAAGCTGGAAAATGCTGCCATTGAGCGATCAAAAGCTGTCGATTCTG CTGTGCTTGGAAAATACAGCATATGGCGAAAAGAGAATGAGAATGAGAATTCAGACTCTA CAGTTAGGCTGATGAGGGACCAAATTATTATGGCTCGTGTCTATTCTACGCTTGCTAAAT CAAAGAACAAGAACGATCTATATCAAAAACTGCAGACTCGAATCAGAGAAAGCCAGCGGG CTGTTGGAGAGGCTAATGCTGATGCTGACCTGCATCACAGCGCACCAGAAAAAATCAGAG CAATGGGTCAAGTTTTATCAAAGGCTAGAGAAGAACTTTATGATTGTACGGCAATCACTC AGAGAATAAGGGCTATGCTTCAGTCAGCTGATGAACAGGTCAGGAGCTTGAAGAAGCAGA GTACATTTCTTAGCCAGTTGGCTGCAAAGACAATTCCAAACAGCATTCACTGCTTGTCTA TGCGTTTAACAATTGATTACTATATCCTGCCCCTTGAGGAACGGAAATTCCCAAGGAGTG AAAATTTAGAAAACCCAAATCTCTATCACTATGCACTTTTCTCTGATAATGTTTTGGCAG CCTCTGTTGTTGTGAACTCAACCATAATGAATGCTAAGGAACCAGAGAAACATGTTTTCC ATCTTGTGACTGACAAGTTAAACTTTGGAGCCATGAACATGTGGTTTCTGCTGAACCCAC CTGGCAAGGCCACCATCCATGTTGAGAATGTGGACGAATTTAAGTGGTTGAACTCATCAT ACTGTCCTGTGTTGCGGCAACTTGAGTCTGCTGCCATGAAAGAGTACTATTTCAAAGCTG ATCGTCCCACCACTCTCTCAGCAGGTTCTTCGAACCTAAAGTATCGGAACCCCAAGTACC TCTCTATGCTGAACCACTTGAGGTTCTATCTCCCAGAGGTCTATCCAAAGTTGGATAAGA TACTCTTCCTCGACGATGACATAGTTGTGCAGAAAGATTTAACAGGGCTGTGGGATGTTG ATCTTAATGGAAAGGTCAATGGTGCTGTGGAAACCTGTGGGGAGAGTTTTCACCGTTTTG ACAAATATCTTAATTTTTCAAATCCACACATTGCTCGGAACTTTGATCCAAATGCATGTG GCTGGGCTTATGGGATGAACATCTTTGATCTGAGGGAGTGGAAGAAGAAAGATATTACTG GGATCTACCACAAATGGCAAAATATGAATGAAGACAGGGTCCTTTGGAAGCTTGGGACAC TTCCGCCTGGCCTCTTGACCTTCTATAAGTTGACGCACCCACTGGACAAGTCATGGCATG TTCTTGGATTAGGATACAACCCAAGCATTGACCGTTCAGAGATAGACAATGCTGCTGTGG TTCATTACAATGGGAACATGAAGCCATGGCTGGAGCTAGCAATGACCAAGTACCGACCAT ATTGGACCAAGTATATCAAGTATGATCACCCTTACATCCGTGGATGCAACTTGAGTGAGT AGATAGTCGTGCTGAAAAACTGACAGATGAGGAAGAGCTTATTGGACAGAAGTGTTCCAC TACCATGTCCTTGCGGTGCGTTATTCGACTCAGCAAAGTGGTACTAC